RNA–Protein interactions for RNA: ENST00000454906.6

EXTL3-202, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-202ENST00000454906 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
EXTL3-202ENST00000454906 ARAP3Q8WWN8 1544 aa14.06□□□□□ -0.16
EXTL3-202ENST00000454906 SIGLEC1Q9BZZ2 1709 aa14.05□□□□□ -0.16
EXTL3-202ENST00000454906 ARHGEF40Q8TER5 1519 aa14.04□□□□□ -0.16
EXTL3-202ENST00000454906 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
EXTL3-202ENST00000454906 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
EXTL3-202ENST00000454906 PLCH2O75038 1416 aa14.03□□□□□ -0.16
EXTL3-202ENST00000454906 DENND4BO75064 1496 aaPredicted RBP14.03□□□□□ -0.16
EXTL3-202ENST00000454906 ZNF777Q9ULD5 760 aaPredicted RBP14.02□□□□□ -0.17
EXTL3-202ENST00000454906 ABCC1P33527 1531 aa14.01□□□□□ -0.17
EXTL3-202ENST00000454906 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
EXTL3-202ENST00000454906 SCAPERQ9BY12 1400 aa14□□□□□ -0.17
EXTL3-202ENST00000454906 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
EXTL3-202ENST00000454906 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
EXTL3-202ENST00000454906 HECW2Q9P2P5 1572 aa13.99□□□□□ -0.17
EXTL3-202ENST00000454906 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
EXTL3-202ENST00000454906 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
EXTL3-202ENST00000454906 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
EXTL3-202ENST00000454906 RIMS1Q86UR5 1692 aaKnown RBP13.98□□□□□ -0.17
EXTL3-202ENST00000454906 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
EXTL3-202ENST00000454906 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
EXTL3-202ENST00000454906 EFCAB2Q5VUJ9 269 aa13.97□□□□□ -0.17
EXTL3-202ENST00000454906 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
EXTL3-202ENST00000454906 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.17
EXTL3-202ENST00000454906 GPATCH8Q9UKJ3 1502 aaKnown RBP13.96□□□□□ -0.17
EXTL3-202ENST00000454906 BCORL1Q5H9F3 1711 aa13.96□□□□□ -0.17
EXTL3-202ENST00000454906 MADDQ8WXG6 1647 aa13.96□□□□□ -0.17
EXTL3-202ENST00000454906 ARHGEF12Q9NZN5 1544 aa13.95□□□□□ -0.18
EXTL3-202ENST00000454906 KIDINS220Q9ULH0 1771 aa13.95□□□□□ -0.18
EXTL3-202ENST00000454906 PHLDB1Q86UU1 1377 aa13.95□□□□□ -0.18
EXTL3-202ENST00000454906 ARID4BQ4LE39 1312 aaPredicted RBP13.94□□□□□ -0.18
EXTL3-202ENST00000454906 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
EXTL3-202ENST00000454906 KDM4FA0A1W2PPD8 638 aa13.94□□□□□ -0.18
EXTL3-202ENST00000454906 KDM5CP41229 1560 aa13.93□□□□□ -0.18
EXTL3-202ENST00000454906 DIP2CQ9Y2E4 1556 aa13.93□□□□□ -0.18
EXTL3-202ENST00000454906 TRAPPC8Q9Y2L5 1435 aa13.93□□□□□ -0.18
EXTL3-202ENST00000454906 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
EXTL3-202ENST00000454906 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
EXTL3-202ENST00000454906 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
EXTL3-202ENST00000454906 ADAMTSL3P82987 1691 aa13.91□□□□□ -0.18
EXTL3-202ENST00000454906 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
EXTL3-202ENST00000454906 APLP2Q06481 763 aa13.9□□□□□ -0.18
EXTL3-202ENST00000454906 AFAP1Q8N556 730 aa13.9□□□□□ -0.18
EXTL3-202ENST00000454906 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
EXTL3-202ENST00000454906 CAMSAP2Q08AD1 1489 aa13.9□□□□□ -0.18
EXTL3-202ENST00000454906 ZNF644Q9H582 1327 aaPredicted RBP13.9□□□□□ -0.19
EXTL3-202ENST00000454906 HNRNPMP52272 730 aaKnown RBP eCLIP13.89□□□□□ -0.19
EXTL3-202ENST00000454906 MLECQ14165 292 aa13.89□□□□□ -0.19
EXTL3-202ENST00000454906 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
EXTL3-202ENST00000454906 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
EXTL3-202ENST00000454906 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
EXTL3-202ENST00000454906 CROCC2H7BZ55 1655 aa13.86□□□□□ -0.19
EXTL3-202ENST00000454906 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
EXTL3-202ENST00000454906 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
EXTL3-202ENST00000454906 PTPN23Q9H3S7 1636 aa13.85□□□□□ -0.19
EXTL3-202ENST00000454906 MAGI2Q86UL8 1455 aa13.83□□□□□ -0.2
EXTL3-202ENST00000454906 PLEKHH2Q8IVE3 1493 aa13.83□□□□□ -0.2
EXTL3-202ENST00000454906 ATP10AO60312 1499 aa13.82□□□□□ -0.2
EXTL3-202ENST00000454906 SPAG9O60271 1321 aaKnown RBP13.81□□□□□ -0.2
EXTL3-202ENST00000454906 CLTCQ00610 1675 aaKnown RBP13.81□□□□□ -0.2
EXTL3-202ENST00000454906 MYOM3Q5VTT5 1437 aa13.81□□□□□ -0.2
EXTL3-202ENST00000454906 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
EXTL3-202ENST00000454906 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
EXTL3-202ENST00000454906 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
EXTL3-202ENST00000454906 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
EXTL3-202ENST00000454906 PTPRMP28827 1452 aa13.78□□□□□ -0.2
EXTL3-202ENST00000454906 C3P01024 1663 aa13.78□□□□□ -0.2
EXTL3-202ENST00000454906 MBD5Q9P267 1494 aa13.77□□□□□ -0.21
EXTL3-202ENST00000454906 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
EXTL3-202ENST00000454906 KIAA1107Q9UPP5 1409 aa13.76□□□□□ -0.21
EXTL3-202ENST00000454906 DNMT1P26358 1616 aaKnown RBP13.75□□□□□ -0.21
EXTL3-202ENST00000454906 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
EXTL3-202ENST00000454906 CEP152O94986 1710 aa13.74□□□□□ -0.21
EXTL3-202ENST00000454906 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
EXTL3-202ENST00000454906 A2MP01023 1474 aa13.73□□□□□ -0.21
EXTL3-202ENST00000454906 FAM50AQ14320 339 aaKnown RBP13.71□□□□□ -0.21
EXTL3-202ENST00000454906 PREX1Q8TCU6 1659 aa13.71□□□□□ -0.21
EXTL3-202ENST00000454906 MAST1Q9Y2H9 1570 aa13.71□□□□□ -0.22
EXTL3-202ENST00000454906 MIA2Q96PC5 1412 aa13.7□□□□□ -0.22
EXTL3-202ENST00000454906 AGLP35573 1532 aa13.69□□□□□ -0.22
EXTL3-202ENST00000454906 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
EXTL3-202ENST00000454906 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
EXTL3-202ENST00000454906 CHIC2Q9UKJ5 165 aa13.68□□□□□ -0.22
EXTL3-202ENST00000454906 DAPK1P53355 1430 aa13.67□□□□□ -0.22
EXTL3-202ENST00000454906 GGT6Q6P531 493 aa13.67□□□□□ -0.22
EXTL3-202ENST00000454906 ESF1Q9H501 851 aaKnown RBP13.67□□□□□ -0.22
EXTL3-202ENST00000454906 TCOF1Q13428 1488 aaKnown RBP13.67□□□□□ -0.22
EXTL3-202ENST00000454906 ABCC5O15440 1437 aa13.65□□□□□ -0.22
EXTL3-202ENST00000454906 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
EXTL3-202ENST00000454906 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
EXTL3-202ENST00000454906 ITGAEP38570 1179 aa13.65□□□□□ -0.22
EXTL3-202ENST00000454906 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
EXTL3-202ENST00000454906 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
EXTL3-202ENST00000454906 RNF17Q9BXT8 1623 aaKnown RBP13.64□□□□□ -0.23
EXTL3-202ENST00000454906 KIF3BO15066 747 aa13.63□□□□□ -0.23
EXTL3-202ENST00000454906 SETD1BQ9UPS6 1966 aaKnown RBP13.63□□□□□ -0.23
EXTL3-202ENST00000454906 MYO3AQ8NEV4 1616 aa13.62□□□□□ -0.23
EXTL3-202ENST00000454906 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
EXTL3-202ENST00000454906 CAMSAP1Q5T5Y3 1602 aa13.61□□□□□ -0.23
EXTL3-202ENST00000454906 MROH1Q8NDA8 1641 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms