RNA–Protein interactions for RNA: ENST00000454786.5

UBE2F-218, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-218ENST00000454786 POGZQ7Z3K3 1410 aa28.53■■■□□ 2.16
UBE2F-218ENST00000454786 LMTK3Q96Q04 1460 aa28.52■■■□□ 2.16
UBE2F-218ENST00000454786 YEATS2Q9ULM3 1422 aa28.52■■■□□ 2.16
UBE2F-218ENST00000454786 EHMT2Q96KQ7 1210 aa28.51■■■□□ 2.15
UBE2F-218ENST00000454786 SCAPERQ9BY12 1400 aa28.48■■■□□ 2.15
UBE2F-218ENST00000454786 ATP1B4Q9UN42 357 aaPredicted RBP28.46■■■□□ 2.15
UBE2F-218ENST00000454786 CDC42BPBQ9Y5S2 1711 aa28.44■■■□□ 2.14
UBE2F-218ENST00000454786 CDK11AQ9UQ88 783 aaPredicted RBP28.43■■■□□ 2.14
UBE2F-218ENST00000454786 ARHGAP5Q13017 1502 aa28.42■■■□□ 2.14
UBE2F-218ENST00000454786 CLIP1P30622 1438 aa28.42■■■□□ 2.14
UBE2F-218ENST00000454786 TROQ12816 1431 aaPredicted RBP28.42■■■□□ 2.14
UBE2F-218ENST00000454786 CHIC1Q5VXU3 224 aa28.41■■■□□ 2.14
UBE2F-218ENST00000454786 KDM5CP41229 1560 aa28.4■■■□□ 2.14
UBE2F-218ENST00000454786 PREX2Q70Z35 1606 aa28.4■■■□□ 2.14
UBE2F-218ENST00000454786 ZNF518AQ6AHZ1 1483 aa28.39■■■□□ 2.13
UBE2F-218ENST00000454786 C9orf84Q5VXU9 1444 aa28.38■■■□□ 2.13
UBE2F-218ENST00000454786 ATP10AO60312 1499 aa28.37■■■□□ 2.13
UBE2F-218ENST00000454786 PREX1Q8TCU6 1659 aa28.37■■■□□ 2.13
UBE2F-218ENST00000454786 ARHGEF12Q9NZN5 1544 aa28.37■■■□□ 2.13
UBE2F-218ENST00000454786 EFCAB2Q5VUJ9 269 aa28.36■■■□□ 2.13
UBE2F-218ENST00000454786 ITSN2Q9NZM3 1697 aa28.34■■■□□ 2.13
UBE2F-218ENST00000454786 CCDC18Q5T9S5 1454 aa28.34■■■□□ 2.13
UBE2F-218ENST00000454786 CDC42BPAQ5VT25 1732 aa28.32■■■□□ 2.12
UBE2F-218ENST00000454786 DIP2CQ9Y2E4 1556 aa28.32■■■□□ 2.12
UBE2F-218ENST00000454786 MLECQ14165 292 aa28.3■■■□□ 2.12
UBE2F-218ENST00000454786 ABCA6Q8N139 1617 aa28.29■■■□□ 2.12
UBE2F-218ENST00000454786 PLPPR3Q6T4P5 718 aa28.29■■■□□ 2.12
UBE2F-218ENST00000454786 FBXO41Q8TF61 875 aa28.29■■■□□ 2.12
UBE2F-218ENST00000454786 REREQ9P2R6 1566 aa28.28■■■□□ 2.12
UBE2F-218ENST00000454786 ABCC1P33527 1531 aa28.28■■■□□ 2.12
UBE2F-218ENST00000454786 CASKIN1Q8WXD9 1431 aa28.27■■■□□ 2.12
UBE2F-218ENST00000454786 FYCO1Q9BQS8 1478 aa28.22■■■□□ 2.11
UBE2F-218ENST00000454786 HSPA2P54652 639 aa28.22■■■□□ 2.11
UBE2F-218ENST00000454786 SETD1BQ9UPS6 1966 aaKnown RBP28.2■■■□□ 2.11
UBE2F-218ENST00000454786 C3P01024 1663 aa28.19■■■□□ 2.1
UBE2F-218ENST00000454786 MLH3Q9UHC1 1453 aa28.19■■■□□ 2.1
UBE2F-218ENST00000454786 KIDINS220Q9ULH0 1771 aa28.19■■■□□ 2.1
UBE2F-218ENST00000454786 AFAP1Q8N556 730 aa28.17■■■□□ 2.1
UBE2F-218ENST00000454786 MYT1LQ9UL68 1186 aa28.15■■■□□ 2.1
UBE2F-218ENST00000454786 STRCQ7RTU9 1775 aa28.13■■■□□ 2.09
UBE2F-218ENST00000454786 AGLP35573 1532 aa28.13■■■□□ 2.09
UBE2F-218ENST00000454786 TRAPPC8Q9Y2L5 1435 aa28.12■■■□□ 2.09
UBE2F-218ENST00000454786 SAMD9LQ8IVG5 1584 aa28.11■■■□□ 2.09
UBE2F-218ENST00000454786 SYCP2Q9BX26 1530 aa28.07■■■□□ 2.08
UBE2F-218ENST00000454786 UHRF1BP1Q6BDS2 1440 aa28.06■■■□□ 2.08
UBE2F-218ENST00000454786 MROH2AA6NES4 1674 aa28.05■■■□□ 2.08
UBE2F-218ENST00000454786 CEBPAP49715 358 aaPredicted RBP28.05■■■□□ 2.08
UBE2F-218ENST00000454786 SUPT6HQ7KZ85 1726 aaKnown RBP28.04■■■□□ 2.08
UBE2F-218ENST00000454786 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
UBE2F-218ENST00000454786 GPATCH8Q9UKJ3 1502 aaKnown RBP27.99■■■□□ 2.07
UBE2F-218ENST00000454786 ATP7AQ04656 1500 aa27.97■■■□□ 2.07
UBE2F-218ENST00000454786 CNTLNQ9NXG0 1405 aa27.96■■■□□ 2.07
UBE2F-218ENST00000454786 ESF1Q9H501 851 aaKnown RBP27.95■■■□□ 2.06
UBE2F-218ENST00000454786 CERKQ8TCT0 537 aa27.94■■■□□ 2.06
UBE2F-218ENST00000454786 PLEKHH2Q8IVE3 1493 aa27.94■■■□□ 2.06
UBE2F-218ENST00000454786 CLTCQ00610 1675 aaKnown RBP27.94■■■□□ 2.06
UBE2F-218ENST00000454786 ADGBQ8N7X0 1667 aa27.94■■■□□ 2.06
UBE2F-218ENST00000454786 ZNF777Q9ULD5 760 aaPredicted RBP27.93■■■□□ 2.06
UBE2F-218ENST00000454786 PLXNC1O60486 1568 aa27.93■■■□□ 2.06
UBE2F-218ENST00000454786 TIAM1Q13009 1591 aa27.9■■■□□ 2.06
UBE2F-218ENST00000454786 EHBP1L1Q8N3D4 1523 aa27.89■■■□□ 2.06
UBE2F-218ENST00000454786 DMRT2Q9Y5R5 561 aa27.89■■■□□ 2.06
UBE2F-218ENST00000454786 CCNB3Q8WWL7 1395 aa27.88■■■□□ 2.05
UBE2F-218ENST00000454786 KIAA1107Q9UPP5 1409 aa27.88■■■□□ 2.05
UBE2F-218ENST00000454786 SPAG9O60271 1321 aaKnown RBP27.88■■■□□ 2.05
UBE2F-218ENST00000454786 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
UBE2F-218ENST00000454786 ZNF142P52746 1687 aaPredicted RBP27.86■■■□□ 2.05
UBE2F-218ENST00000454786 MYO3AQ8NEV4 1616 aa27.84■■■□□ 2.05
UBE2F-218ENST00000454786 HNRNPMP52272 730 aaKnown RBP eCLIP27.83■■■□□ 2.052e-6■■■□□ 16.1
UBE2F-218ENST00000454786 CFDP1Q9UEE9 299 aaPredicted RBP27.83■■■□□ 2.05
UBE2F-218ENST00000454786 PTPRTO14522 1441 aa27.83■■■□□ 2.05
UBE2F-218ENST00000454786 NPATQ14207 1427 aa27.83■■■□□ 2.05
UBE2F-218ENST00000454786 A2MP01023 1474 aa27.83■■■□□ 2.04
UBE2F-218ENST00000454786 CAMSAP1Q5T5Y3 1602 aa27.79■■■□□ 2.04
UBE2F-218ENST00000454786 NCOA1Q15788 1441 aa27.78■■■□□ 2.04
UBE2F-218ENST00000454786 ZMYM3Q14202 1370 aa27.73■■■□□ 2.03
UBE2F-218ENST00000454786 CEP162Q5TB80 1403 aa27.73■■■□□ 2.03
UBE2F-218ENST00000454786 CEP170BQ9Y4F5 1589 aaPredicted RBP27.73■■■□□ 2.03
UBE2F-218ENST00000454786 LTBP4Q8N2S1 1624 aa27.72■■■□□ 2.03
UBE2F-218ENST00000454786 MBD5Q9P267 1494 aa27.7■■■□□ 2.02
UBE2F-218ENST00000454786 IQSEC2Q5JU85 1478 aa27.67■■■□□ 2.02
UBE2F-218ENST00000454786 RTEL1-TNFRSF6BF6WH68 1400 aa27.66■■■□□ 2.02
UBE2F-218ENST00000454786 PTPRKQ15262 1439 aa27.66■■■□□ 2.02
UBE2F-218ENST00000454786 ZNF644Q9H582 1327 aaPredicted RBP27.65■■■□□ 2.02
UBE2F-218ENST00000454786 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.02
UBE2F-218ENST00000454786 PLA2R1Q13018 1463 aa27.64■■■□□ 2.02
UBE2F-218ENST00000454786 POLR1AO95602 1720 aaPredicted RBP27.64■■■□□ 2.02
UBE2F-218ENST00000454786 CCDC141Q6ZP82 1450 aa27.64■■■□□ 2.01
UBE2F-218ENST00000454786 GGT6Q6P531 493 aa27.63■■■□□ 2.01
UBE2F-218ENST00000454786 NCOA2Q15596 1464 aa27.63■■■□□ 2.01
UBE2F-218ENST00000454786 FAM135AQ9P2D6 1515 aa27.61■■■□□ 2.01
UBE2F-218ENST00000454786 ARHGEF5Q12774 1597 aa27.58■■■□□ 2.01
UBE2F-218ENST00000454786 PPP6R1Q9UPN7 881 aa27.58■■■□□ 2.01
UBE2F-218ENST00000454786 DNMT1P26358 1616 aaKnown RBP27.58■■■□□ 2.01
UBE2F-218ENST00000454786 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
UBE2F-218ENST00000454786 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
UBE2F-218ENST00000454786 DHX29Q7Z478 1369 aaKnown RBP27.56■■■□□ 2
UBE2F-218ENST00000454786 A2ML1A8K2U0 1454 aa27.54■■■□□ 2
UBE2F-218ENST00000454786 NCKAP5LQ9HCH0 1330 aa27.52■■■□□ 2
UBE2F-218ENST00000454786 SPATA31D1Q6ZQQ2 1576 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms