RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 CDC42BPBQ9Y5S2 1711 aa48.12■■■■■ 5.29
CCDC117-206ENST00000453543 PREX2Q70Z35 1606 aa48.1■■■■■ 5.29
CCDC117-206ENST00000453543 ZMYM4Q5VZL5 1548 aa48.09■■■■■ 5.29
CCDC117-206ENST00000453543 POGZQ7Z3K3 1410 aa48.07■■■■■ 5.29
CCDC117-206ENST00000453543 ARHGEF40Q8TER5 1519 aa48.07■■■■■ 5.29
CCDC117-206ENST00000453543 CDC42BPAQ5VT25 1732 aa48.03■■■■■ 5.28
CCDC117-206ENST00000453543 MTUS2Q5JR59 1369 aa47.98■■■■■ 5.27
CCDC117-206ENST00000453543 ZFYVE16Q7Z3T8 1539 aa47.96■■■■■ 5.27
CCDC117-206ENST00000453543 YEATS2Q9ULM3 1422 aa47.95■■■■■ 5.27
CCDC117-206ENST00000453543 MAGI2Q86UL8 1455 aa47.92■■■■■ 5.26
CCDC117-206ENST00000453543 VPS8Q8N3P4 1428 aa47.9■■■■■ 5.26
CCDC117-206ENST00000453543 EHBP1L1Q8N3D4 1523 aa47.89■■■■■ 5.26
CCDC117-206ENST00000453543 GPATCH8Q9UKJ3 1502 aaKnown RBP47.89■■■■■ 5.26
CCDC117-206ENST00000453543 ABCC1P33527 1531 aa47.88■■■■■ 5.26
CCDC117-206ENST00000453543 ZNF518AQ6AHZ1 1483 aa47.87■■■■■ 5.25
CCDC117-206ENST00000453543 ARHGEF12Q9NZN5 1544 aa47.83■■■■■ 5.25
CCDC117-206ENST00000453543 KDM5CP41229 1560 aa47.83■■■■■ 5.25
CCDC117-206ENST00000453543 ARID4BQ4LE39 1312 aaPredicted RBP47.82■■■■■ 5.25
CCDC117-206ENST00000453543 AFAP1Q8N556 730 aa47.81■■■■■ 5.24
CCDC117-206ENST00000453543 ADAMTSL3P82987 1691 aa47.8■■■■■ 5.24
CCDC117-206ENST00000453543 ITSN2Q9NZM3 1697 aa47.8■■■■■ 5.24
CCDC117-206ENST00000453543 BCORL1Q5H9F3 1711 aa47.8■■■■■ 5.24
CCDC117-206ENST00000453543 SIGLEC1Q9BZZ2 1709 aa47.79■■■■■ 5.24
CCDC117-206ENST00000453543 CCNB3Q8WWL7 1395 aa47.78■■■■■ 5.24
CCDC117-206ENST00000453543 TIAM1Q13009 1591 aa47.78■■■■■ 5.24
CCDC117-206ENST00000453543 SAMD9LQ8IVG5 1584 aa47.77■■■■■ 5.24
CCDC117-206ENST00000453543 TRAPPC8Q9Y2L5 1435 aa47.76■■■■■ 5.24
CCDC117-206ENST00000453543 ZNF777Q9ULD5 760 aaPredicted RBP47.74■■■■■ 5.23
CCDC117-206ENST00000453543 HECW2Q9P2P5 1572 aa47.71■■■■■ 5.23
CCDC117-206ENST00000453543 ATP10AO60312 1499 aa47.68■■■■■ 5.22
CCDC117-206ENST00000453543 CFDP1Q9UEE9 299 aaPredicted RBP47.68■■■■■ 5.22
CCDC117-206ENST00000453543 MADDQ8WXG6 1647 aa47.66■■■■■ 5.22
CCDC117-206ENST00000453543 SYCP2Q9BX26 1530 aa47.66■■■■■ 5.22
CCDC117-206ENST00000453543 C9orf84Q5VXU9 1444 aa47.64■■■■■ 5.22
CCDC117-206ENST00000453543 MLH3Q9UHC1 1453 aa47.63■■■■■ 5.22
CCDC117-206ENST00000453543 SUPT6HQ7KZ85 1726 aaKnown RBP47.62■■■■■ 5.21
CCDC117-206ENST00000453543 MYT1LQ9UL68 1186 aa47.61■■■■■ 5.21
CCDC117-206ENST00000453543 DIP2CQ9Y2E4 1556 aa47.6■■■■■ 5.21
CCDC117-206ENST00000453543 NCOA2Q15596 1464 aa47.59■■■■■ 5.21
CCDC117-206ENST00000453543 ABCA6Q8N139 1617 aa47.58■■■■■ 5.21
CCDC117-206ENST00000453543 PTPRMP28827 1452 aa47.58■■■■■ 5.21
CCDC117-206ENST00000453543 HNRNPMP52272 730 aaKnown RBP eCLIP47.56■■■■■ 5.2
CCDC117-206ENST00000453543 LRRC9Q6ZRR7 1453 aa47.56■■■■■ 5.2
CCDC117-206ENST00000453543 PLEKHH2Q8IVE3 1493 aa47.56■■■■■ 5.2
CCDC117-206ENST00000453543 KIAA1107Q9UPP5 1409 aa47.55■■■■■ 5.2
CCDC117-206ENST00000453543 MAP3K1Q13233 1512 aa47.53■■■■■ 5.2
CCDC117-206ENST00000453543 KIDINS220Q9ULH0 1771 aa47.52■■■■■ 5.2
CCDC117-206ENST00000453543 RIMS1Q86UR5 1692 aaKnown RBP47.5■■■■■ 5.19
CCDC117-206ENST00000453543 MLECQ14165 292 aa47.49■■■■■ 5.19
CCDC117-206ENST00000453543 ZNF644Q9H582 1327 aaPredicted RBP47.49■■■■■ 5.19
CCDC117-206ENST00000453543 REREQ9P2R6 1566 aa47.46■■■■■ 5.19
CCDC117-206ENST00000453543 KANK4Q5T7N3 995 aaPredicted RBP47.45■■■■■ 5.19
CCDC117-206ENST00000453543 SPAG9O60271 1321 aaKnown RBP47.4■■■■■ 5.18
CCDC117-206ENST00000453543 FER1L4A9Z1Z3 1794 aa47.39■■■■■ 5.18
CCDC117-206ENST00000453543 INO80Q9ULG1 1556 aaPredicted RBP47.36■■■■■ 5.17
CCDC117-206ENST00000453543 MBD5Q9P267 1494 aa47.35■■■■■ 5.17
CCDC117-206ENST00000453543 ATP7AQ04656 1500 aa47.35■■■■■ 5.17
CCDC117-206ENST00000453543 CAMSAP2Q08AD1 1489 aa47.32■■■■■ 5.17
CCDC117-206ENST00000453543 AGLP35573 1532 aa47.3■■■■■ 5.16
CCDC117-206ENST00000453543 APLP2Q06481 763 aa47.24■■■■■ 5.15
CCDC117-206ENST00000453543 PLPPR3Q6T4P5 718 aa47.21■■■■■ 5.15
CCDC117-206ENST00000453543 CCDC141Q6ZP82 1450 aa47.17■■■■■ 5.14
CCDC117-206ENST00000453543 MYOM3Q5VTT5 1437 aa47.14■■■■■ 5.14
CCDC117-206ENST00000453543 PLXNC1O60486 1568 aa47.13■■■■■ 5.14
CCDC117-206ENST00000453543 A2MP01023 1474 aa47.13■■■■■ 5.13
CCDC117-206ENST00000453543 RTEL1-TNFRSF6BF6WH68 1400 aa47.1■■■■■ 5.13
CCDC117-206ENST00000453543 ARHGEF5Q12774 1597 aa47.1■■■■■ 5.13
CCDC117-206ENST00000453543 ADGBQ8N7X0 1667 aa47.09■■■■■ 5.13
CCDC117-206ENST00000453543 MIA2Q96PC5 1412 aa47.06■■■■■ 5.12
CCDC117-206ENST00000453543 RSPH4AQ5TD94 716 aa47.04■■■■■ 5.12
CCDC117-206ENST00000453543 LMTK3Q96Q04 1460 aa47.03■■■■■ 5.12
CCDC117-206ENST00000453543 CEBPAP49715 358 aaPredicted RBP47.01■■■■■ 5.12
CCDC117-206ENST00000453543 ESF1Q9H501 851 aaKnown RBP46.94■■■■■ 5.1
CCDC117-206ENST00000453543 C3P01024 1663 aa46.94■■■■■ 5.1
CCDC117-206ENST00000453543 DHX29Q7Z478 1369 aaKnown RBP46.9■■■■■ 5.1
CCDC117-206ENST00000453543 TSPY4P0CV99 314 aa46.9■■■■■ 5.1
CCDC117-206ENST00000453543 TSPY10P0CW01 314 aa46.9■■■■■ 5.1
CCDC117-206ENST00000453543 CNTLNQ9NXG0 1405 aa46.89■■■■■ 5.1
CCDC117-206ENST00000453543 PTPN23Q9H3S7 1636 aa46.87■■■■■ 5.09
CCDC117-206ENST00000453543 MAST1Q9Y2H9 1570 aa46.86■■■■■ 5.09
CCDC117-206ENST00000453543 FGD6Q6ZV73 1430 aa46.83■■■■■ 5.09
CCDC117-206ENST00000453543 GGT6Q6P531 493 aa46.83■■■■■ 5.09
CCDC117-206ENST00000453543 PREX1Q8TCU6 1659 aa46.82■■■■■ 5.09
CCDC117-206ENST00000453543 MROH2AA6NES4 1674 aa46.81■■■■■ 5.08
CCDC117-206ENST00000453543 CLTCQ00610 1675 aaKnown RBP46.8■■■■■ 5.08
CCDC117-206ENST00000453543 HSPA2P54652 639 aa46.78■■■■■ 5.08
CCDC117-206ENST00000453543 TCOF1Q13428 1488 aaKnown RBP46.75■■■■■ 5.07
CCDC117-206ENST00000453543 KIF3BO15066 747 aa46.72■■■■■ 5.07
CCDC117-206ENST00000453543 ZMYM3Q14202 1370 aa46.72■■■■■ 5.07
CCDC117-206ENST00000453543 CROCC2H7BZ55 1655 aa46.71■■■■■ 5.07
CCDC117-206ENST00000453543 ABCC5O15440 1437 aa46.71■■■■■ 5.07
CCDC117-206ENST00000453543 SETD1BQ9UPS6 1966 aaKnown RBP46.7■■■■■ 5.07
CCDC117-206ENST00000453543 UHRF1BP1Q6BDS2 1440 aa46.67■■■■■ 5.06
CCDC117-206ENST00000453543 DNMT1P26358 1616 aaKnown RBP46.66■■■■■ 5.06
CCDC117-206ENST00000453543 PPP6R1Q9UPN7 881 aa46.66■■■■■ 5.06
CCDC117-206ENST00000453543 SHANK2Q9UPX8 1470 aa46.64■■■■■ 5.06
CCDC117-206ENST00000453543 DAPK1P53355 1430 aa46.63■■■■■ 5.06
CCDC117-206ENST00000453543 NPATQ14207 1427 aa46.6■■■■■ 5.05
CCDC117-206ENST00000453543 KDM5DQ9BY66 1539 aa46.54■■■■■ 5.04
CCDC117-206ENST00000453543 EIF2AK4Q9P2K8 1649 aaKnown RBP46.54■■■■■ 5.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms