RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 PLCH2O75038 1416 aa18.94■□□□□ 0.62
HLA-DPA1-244ENST00000453337 PREX2Q70Z35 1606 aa18.93■□□□□ 0.62
HLA-DPA1-244ENST00000453337 EFCAB2Q5VUJ9 269 aa18.93■□□□□ 0.62
HLA-DPA1-244ENST00000453337 ZNF777Q9ULD5 760 aaPredicted RBP18.93■□□□□ 0.62
HLA-DPA1-244ENST00000453337 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
HLA-DPA1-244ENST00000453337 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
HLA-DPA1-244ENST00000453337 GLI2P10070 1586 aa18.89■□□□□ 0.62
HLA-DPA1-244ENST00000453337 ITGAEP38570 1179 aa18.89■□□□□ 0.61
HLA-DPA1-244ENST00000453337 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
HLA-DPA1-244ENST00000453337 RSPH4AQ5TD94 716 aa18.88■□□□□ 0.61
HLA-DPA1-244ENST00000453337 CD109Q6YHK3 1445 aa18.88■□□□□ 0.61
HLA-DPA1-244ENST00000453337 CAMSAP2Q08AD1 1489 aa18.87■□□□□ 0.61
HLA-DPA1-244ENST00000453337 FAM69CQ0P6D2 419 aa18.87■□□□□ 0.61
HLA-DPA1-244ENST00000453337 PLEKHH2Q8IVE3 1493 aa18.85■□□□□ 0.61
HLA-DPA1-244ENST00000453337 DIP2BQ9P265 1576 aa18.83■□□□□ 0.6
HLA-DPA1-244ENST00000453337 KIAA1107Q9UPP5 1409 aa18.82■□□□□ 0.6
HLA-DPA1-244ENST00000453337 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
HLA-DPA1-244ENST00000453337 SAMD9LQ8IVG5 1584 aa18.81■□□□□ 0.6
HLA-DPA1-244ENST00000453337 HNRNPMP52272 730 aaKnown RBP eCLIP18.81■□□□□ 0.6
HLA-DPA1-244ENST00000453337 FANCAO15360 1455 aa18.81■□□□□ 0.6
HLA-DPA1-244ENST00000453337 TSPY4P0CV99 314 aa18.8■□□□□ 0.6
HLA-DPA1-244ENST00000453337 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
HLA-DPA1-244ENST00000453337 DNMT1P26358 1616 aaKnown RBP18.8■□□□□ 0.6
HLA-DPA1-244ENST00000453337 ABCC5O15440 1437 aa18.79■□□□□ 0.6
HLA-DPA1-244ENST00000453337 DAPK1P53355 1430 aa18.79■□□□□ 0.6
HLA-DPA1-244ENST00000453337 CFAP74Q9C0B2 1584 aa18.79■□□□□ 0.6
HLA-DPA1-244ENST00000453337 ARHGEF5Q12774 1597 aa18.78■□□□□ 0.6
HLA-DPA1-244ENST00000453337 KIF13AQ9H1H9 1805 aa18.78■□□□□ 0.6
HLA-DPA1-244ENST00000453337 MBD5Q9P267 1494 aa18.77■□□□□ 0.59
HLA-DPA1-244ENST00000453337 AKNAQ7Z591 1439 aa18.76■□□□□ 0.59
HLA-DPA1-244ENST00000453337 PTPRKQ15262 1439 aa18.75■□□□□ 0.59
HLA-DPA1-244ENST00000453337 CHIC2Q9UKJ5 165 aa18.75■□□□□ 0.59
HLA-DPA1-244ENST00000453337 NEO1Q92859 1461 aa18.75■□□□□ 0.59
HLA-DPA1-244ENST00000453337 TSPOAP1O95153 1857 aa18.74■□□□□ 0.59
HLA-DPA1-244ENST00000453337 ABCC1P33527 1531 aa18.74■□□□□ 0.59
HLA-DPA1-244ENST00000453337 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
HLA-DPA1-244ENST00000453337 CCDC141Q6ZP82 1450 aa18.73■□□□□ 0.59
HLA-DPA1-244ENST00000453337 ADGRL1O94910 1474 aa18.72■□□□□ 0.59
HLA-DPA1-244ENST00000453337 ROCK1Q13464 1354 aa18.72■□□□□ 0.59
HLA-DPA1-244ENST00000453337 SCAPERQ9BY12 1400 aa18.72■□□□□ 0.59
HLA-DPA1-244ENST00000453337 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
HLA-DPA1-244ENST00000453337 TEX14Q8IWB6 1497 aa18.71■□□□□ 0.59
HLA-DPA1-244ENST00000453337 SHANK2Q9UPX8 1470 aa18.71■□□□□ 0.59
HLA-DPA1-244ENST00000453337 ARHGEF12Q9NZN5 1544 aa18.7■□□□□ 0.58
HLA-DPA1-244ENST00000453337 HRCP23327 699 aa18.7■□□□□ 0.58
HLA-DPA1-244ENST00000453337 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
HLA-DPA1-244ENST00000453337 ANKRD30AQ9BXX3 1397 aa18.69■□□□□ 0.58
HLA-DPA1-244ENST00000453337 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
HLA-DPA1-244ENST00000453337 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
HLA-DPA1-244ENST00000453337 ADGBQ8N7X0 1667 aa18.68■□□□□ 0.58
HLA-DPA1-244ENST00000453337 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
HLA-DPA1-244ENST00000453337 C9orf84Q5VXU9 1444 aa18.67■□□□□ 0.58
HLA-DPA1-244ENST00000453337 TRAPPC8Q9Y2L5 1435 aa18.67■□□□□ 0.58
HLA-DPA1-244ENST00000453337 AFAP1Q8N556 730 aa18.67■□□□□ 0.58
HLA-DPA1-244ENST00000453337 NCOA1Q15788 1441 aa18.66■□□□□ 0.58
HLA-DPA1-244ENST00000453337 ADGRL2O95490 1459 aa18.66■□□□□ 0.58
HLA-DPA1-244ENST00000453337 MAST1Q9Y2H9 1570 aa18.66■□□□□ 0.58
HLA-DPA1-244ENST00000453337 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
HLA-DPA1-244ENST00000453337 PPRC1Q5VV67 1664 aaKnown RBP18.66■□□□□ 0.58
HLA-DPA1-244ENST00000453337 SPAG9O60271 1321 aaKnown RBP18.65■□□□□ 0.58
HLA-DPA1-244ENST00000453337 NAIPQ13075 1403 aa18.65■□□□□ 0.58
HLA-DPA1-244ENST00000453337 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
HLA-DPA1-244ENST00000453337 DENND4BO75064 1496 aaPredicted RBP18.64■□□□□ 0.57
HLA-DPA1-244ENST00000453337 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
HLA-DPA1-244ENST00000453337 ZNF518AQ6AHZ1 1483 aa18.63■□□□□ 0.57
HLA-DPA1-244ENST00000453337 MYT1LQ9UL68 1186 aa18.62■□□□□ 0.57
HLA-DPA1-244ENST00000453337 GCC2Q8IWJ2 1684 aa18.62■□□□□ 0.57
HLA-DPA1-244ENST00000453337 POGZQ7Z3K3 1410 aa18.59■□□□□ 0.57
HLA-DPA1-244ENST00000453337 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
HLA-DPA1-244ENST00000453337 RAPGEF3O95398 923 aa18.57■□□□□ 0.56
HLA-DPA1-244ENST00000453337 PLXNC1O60486 1568 aa18.56■□□□□ 0.56
HLA-DPA1-244ENST00000453337 RICTORQ6R327 1708 aa18.56■□□□□ 0.56
HLA-DPA1-244ENST00000453337 KDM5CP41229 1560 aa18.55■□□□□ 0.56
HLA-DPA1-244ENST00000453337 MLH3Q9UHC1 1453 aa18.55■□□□□ 0.56
HLA-DPA1-244ENST00000453337 ATP7AQ04656 1500 aa18.54■□□□□ 0.56
HLA-DPA1-244ENST00000453337 ANKRD50Q9ULJ7 1429 aa18.54■□□□□ 0.56
HLA-DPA1-244ENST00000453337 INO80Q9ULG1 1556 aaPredicted RBP18.54■□□□□ 0.56
HLA-DPA1-244ENST00000453337 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
HLA-DPA1-244ENST00000453337 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
HLA-DPA1-244ENST00000453337 DUOX2Q9NRD8 1548 aa18.53■□□□□ 0.56
HLA-DPA1-244ENST00000453337 KIDINS220Q9ULH0 1771 aa18.53■□□□□ 0.56
HLA-DPA1-244ENST00000453337 HECW2Q9P2P5 1572 aa18.51■□□□□ 0.55
HLA-DPA1-244ENST00000453337 TRIM52Q96A61 297 aa18.51■□□□□ 0.55
HLA-DPA1-244ENST00000453337 MAGI2Q86UL8 1455 aa18.49■□□□□ 0.55
HLA-DPA1-244ENST00000453337 KDM6BO15054 1643 aa18.48■□□□□ 0.55
HLA-DPA1-244ENST00000453337 DHX29Q7Z478 1369 aaKnown RBP18.47■□□□□ 0.55
HLA-DPA1-244ENST00000453337 ZMYM4Q5VZL5 1548 aa18.47■□□□□ 0.55
HLA-DPA1-244ENST00000453337 ERBINQ96RT1 1412 aa18.47■□□□□ 0.55
HLA-DPA1-244ENST00000453337 FRMPD1Q5SYB0 1578 aa18.47■□□□□ 0.55
HLA-DPA1-244ENST00000453337 COL17A1Q9UMD9 1497 aaPredicted RBP18.46■□□□□ 0.54
HLA-DPA1-244ENST00000453337 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
HLA-DPA1-244ENST00000453337 A2MP01023 1474 aa18.44■□□□□ 0.54
HLA-DPA1-244ENST00000453337 CLSPNQ9HAW4 1339 aa18.43■□□□□ 0.54
HLA-DPA1-244ENST00000453337 MPHOSPH9Q99550 1183 aa18.41■□□□□ 0.54
HLA-DPA1-244ENST00000453337 ABCA6Q8N139 1617 aa18.41■□□□□ 0.54
HLA-DPA1-244ENST00000453337 KIF3BO15066 747 aa18.4■□□□□ 0.54
HLA-DPA1-244ENST00000453337 EIF2AK4Q9P2K8 1649 aaKnown RBP18.4■□□□□ 0.54
HLA-DPA1-244ENST00000453337 NUP155O75694 1391 aa18.4■□□□□ 0.54
HLA-DPA1-244ENST00000453337 ATP10AO60312 1499 aa18.39■□□□□ 0.54
HLA-DPA1-244ENST00000453337 DIP2CQ9Y2E4 1556 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms