RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ZNF644Q9H582 1327 aaPredicted RBP9.06□□□□□ -0.96
SDC4P-201ENST00000453285 ITGAEP38570 1179 aa9.06□□□□□ -0.96
SDC4P-201ENST00000453285 KCNH8Q96L42 1107 aa9.06□□□□□ -0.96
SDC4P-201ENST00000453285 CAMSAP2Q08AD1 1489 aa9.06□□□□□ -0.96
SDC4P-201ENST00000453285 SAMD9LQ8IVG5 1584 aa9.06□□□□□ -0.96
SDC4P-201ENST00000453285 CROCC2H7BZ55 1655 aa9.06□□□□□ -0.96
SDC4P-201ENST00000453285 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
SDC4P-201ENST00000453285 CFDP1Q9UEE9 299 aaPredicted RBP9.05□□□□□ -0.96
SDC4P-201ENST00000453285 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
SDC4P-201ENST00000453285 ABCC5O15440 1437 aa9.04□□□□□ -0.96
SDC4P-201ENST00000453285 PLCH2O75038 1416 aa9.04□□□□□ -0.96
SDC4P-201ENST00000453285 ADGBQ8N7X0 1667 aa9.04□□□□□ -0.96
SDC4P-201ENST00000453285 ARAP3Q8WWN8 1544 aa9.03□□□□□ -0.96
SDC4P-201ENST00000453285 DAPK1P53355 1430 aa9.03□□□□□ -0.96
SDC4P-201ENST00000453285 GCC2Q8IWJ2 1684 aa9.03□□□□□ -0.96
SDC4P-201ENST00000453285 ARHGEF5Q12774 1597 aa9.03□□□□□ -0.96
SDC4P-201ENST00000453285 ARHGAP5Q13017 1502 aa9.02□□□□□ -0.97
SDC4P-201ENST00000453285 SETD5Q9C0A6 1442 aa9.01□□□□□ -0.97
SDC4P-201ENST00000453285 ZNF777Q9ULD5 760 aaPredicted RBP9.01□□□□□ -0.97
SDC4P-201ENST00000453285 MBD5Q9P267 1494 aa9.01□□□□□ -0.97
SDC4P-201ENST00000453285 ARHGEF12Q9NZN5 1544 aa9□□□□□ -0.97
SDC4P-201ENST00000453285 RAB3GAP2Q9H2M9 1393 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 GLI2P10070 1586 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 HFM1A2PYH4 1435 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 NAIPQ13075 1403 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 AKNAQ7Z591 1439 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 MAP3K4Q9Y6R4 1608 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 KIF13AQ9H1H9 1805 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 HRCP23327 699 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 ABCC1P33527 1531 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 SYCP2Q9BX26 1530 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
SDC4P-201ENST00000453285 KDM6BO15054 1643 aa8.98□□□□□ -0.97
SDC4P-201ENST00000453285 KIAA1107Q9UPP5 1409 aa8.98□□□□□ -0.97
SDC4P-201ENST00000453285 ADGRL2O95490 1459 aa8.98□□□□□ -0.97
SDC4P-201ENST00000453285 PLEKHH2Q8IVE3 1493 aa8.98□□□□□ -0.97
SDC4P-201ENST00000453285 HNRNPMP52272 730 aaKnown RBP eCLIP8.98□□□□□ -0.97
SDC4P-201ENST00000453285 EFCAB2Q5VUJ9 269 aa8.98□□□□□ -0.97
SDC4P-201ENST00000453285 CHIC2Q9UKJ5 165 aa8.98□□□□□ -0.97
SDC4P-201ENST00000453285 DIP2BQ9P265 1576 aa8.98□□□□□ -0.97
SDC4P-201ENST00000453285 MAST1Q9Y2H9 1570 aa8.98□□□□□ -0.97
SDC4P-201ENST00000453285 SHANK2Q9UPX8 1470 aa8.97□□□□□ -0.97
SDC4P-201ENST00000453285 CCDC141Q6ZP82 1450 aa8.96□□□□□ -0.97
SDC4P-201ENST00000453285 TSPOAP1O95153 1857 aa8.96□□□□□ -0.97
SDC4P-201ENST00000453285 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.98
SDC4P-201ENST00000453285 RRP7BPQ9NSQ0 103 aa8.96□□□□□ -0.98
SDC4P-201ENST00000453285 PPRC1Q5VV67 1664 aaKnown RBP8.96□□□□□ -0.98
SDC4P-201ENST00000453285 DHX57Q6P158 1386 aaKnown RBP8.96□□□□□ -0.98
SDC4P-201ENST00000453285 NCOA1Q15788 1441 aa8.96□□□□□ -0.98
SDC4P-201ENST00000453285 CD109Q6YHK3 1445 aa8.96□□□□□ -0.98
SDC4P-201ENST00000453285 FANCAO15360 1455 aa8.96□□□□□ -0.98
SDC4P-201ENST00000453285 CFAP74Q9C0B2 1584 aa8.95□□□□□ -0.98
SDC4P-201ENST00000453285 CCER1Q8TC90 406 aaPredicted RBP8.95□□□□□ -0.98
SDC4P-201ENST00000453285 C9orf84Q5VXU9 1444 aa8.94□□□□□ -0.98
SDC4P-201ENST00000453285 TRAPPC8Q9Y2L5 1435 aa8.94□□□□□ -0.98
SDC4P-201ENST00000453285 PLXNC1O60486 1568 aa8.93□□□□□ -0.98
SDC4P-201ENST00000453285 ANKRD30AQ9BXX3 1397 aa8.92□□□□□ -0.98
SDC4P-201ENST00000453285 TSPY4P0CV99 314 aa8.92□□□□□ -0.98
SDC4P-201ENST00000453285 TSPY10P0CW01 314 aa8.92□□□□□ -0.98
SDC4P-201ENST00000453285 ADGRL1O94910 1474 aa8.91□□□□□ -0.98
SDC4P-201ENST00000453285 NEO1Q92859 1461 aa8.91□□□□□ -0.98
SDC4P-201ENST00000453285 SCAPERQ9BY12 1400 aa8.91□□□□□ -0.98
SDC4P-201ENST00000453285 KIDINS220Q9ULH0 1771 aa8.91□□□□□ -0.98
SDC4P-201ENST00000453285 RICTORQ6R327 1708 aa8.91□□□□□ -0.98
SDC4P-201ENST00000453285 INO80Q9ULG1 1556 aaPredicted RBP8.9□□□□□ -0.98
SDC4P-201ENST00000453285 ZEB1P37275 1124 aaPredicted RBP8.9□□□□□ -0.98
SDC4P-201ENST00000453285 FAM69CQ0P6D2 419 aa8.9□□□□□ -0.98
SDC4P-201ENST00000453285 RTEL1-TNFRSF6BF6WH68 1400 aa8.89□□□□□ -0.99
SDC4P-201ENST00000453285 CLSPNQ9HAW4 1339 aa8.89□□□□□ -0.99
SDC4P-201ENST00000453285 AFAP1Q8N556 730 aa8.89□□□□□ -0.99
SDC4P-201ENST00000453285 KDM5CP41229 1560 aa8.89□□□□□ -0.99
SDC4P-201ENST00000453285 ZFYVE16Q7Z3T8 1539 aa8.89□□□□□ -0.99
SDC4P-201ENST00000453285 DENND4BO75064 1496 aaPredicted RBP8.89□□□□□ -0.99
SDC4P-201ENST00000453285 KIF15Q9NS87 1388 aa8.88□□□□□ -0.99
SDC4P-201ENST00000453285 ANKRD50Q9ULJ7 1429 aa8.88□□□□□ -0.99
SDC4P-201ENST00000453285 ATP7AQ04656 1500 aa8.87□□□□□ -0.99
SDC4P-201ENST00000453285 DUOX2Q9NRD8 1548 aa8.87□□□□□ -0.99
SDC4P-201ENST00000453285 SPAG9O60271 1321 aaKnown RBP8.86□□□□□ -0.99
SDC4P-201ENST00000453285 ACIN1Q9UKV3 1341 aaKnown RBP8.86□□□□□ -0.99
SDC4P-201ENST00000453285 ZNF518AQ6AHZ1 1483 aa8.86□□□□□ -0.99
SDC4P-201ENST00000453285 POGZQ7Z3K3 1410 aa8.86□□□□□ -0.99
SDC4P-201ENST00000453285 UNC13BO14795 1591 aa8.86□□□□□ -0.99
SDC4P-201ENST00000453285 FRMPD1Q5SYB0 1578 aa8.86□□□□□ -0.99
SDC4P-201ENST00000453285 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
SDC4P-201ENST00000453285 PZPP20742 1482 aa8.85□□□□□ -0.99
SDC4P-201ENST00000453285 MLH3Q9UHC1 1453 aa8.85□□□□□ -0.99
SDC4P-201ENST00000453285 HECW2Q9P2P5 1572 aa8.85□□□□□ -0.99
SDC4P-201ENST00000453285 TEX14Q8IWB6 1497 aa8.84□□□□□ -0.99
SDC4P-201ENST00000453285 TRIM52Q96A61 297 aa8.84□□□□□ -0.99
SDC4P-201ENST00000453285 DEPDC5O75140 1603 aa8.83□□□□□ -1
SDC4P-201ENST00000453285 ABCA6Q8N139 1617 aa8.83□□□□□ -1
SDC4P-201ENST00000453285 ERBINQ96RT1 1412 aa8.83□□□□□ -1
SDC4P-201ENST00000453285 MPHOSPH9Q99550 1183 aa8.83□□□□□ -1
SDC4P-201ENST00000453285 EIF2AK4Q9P2K8 1649 aaKnown RBP8.83□□□□□ -1
SDC4P-201ENST00000453285 BCORL1Q5H9F3 1711 aa8.83□□□□□ -1
SDC4P-201ENST00000453285 ZMYM4Q5VZL5 1548 aa8.82□□□□□ -1
SDC4P-201ENST00000453285 RAPGEF3O95398 923 aa8.82□□□□□ -1
SDC4P-201ENST00000453285 IQGAP3Q86VI3 1631 aa8.82□□□□□ -1
SDC4P-201ENST00000453285 MAGI2Q86UL8 1455 aa8.82□□□□□ -1
SDC4P-201ENST00000453285 DHX29Q7Z478 1369 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms