RNA–Protein interactions for RNA: ENST00000453171.5

KRTCAP3-204, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-204ENST00000453171 GPATCH8Q9UKJ3 1502 aaKnown RBP18.77■□□□□ 0.6
KRTCAP3-204ENST00000453171 AKNAQ7Z591 1439 aa18.76■□□□□ 0.59
KRTCAP3-204ENST00000453171 NCOA2Q15596 1464 aa18.76■□□□□ 0.59
KRTCAP3-204ENST00000453171 ITSN2Q9NZM3 1697 aa18.76■□□□□ 0.59
KRTCAP3-204ENST00000453171 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
KRTCAP3-204ENST00000453171 RICTORQ6R327 1708 aa18.74■□□□□ 0.59
KRTCAP3-204ENST00000453171 FRMPD1Q5SYB0 1578 aa18.74■□□□□ 0.59
KRTCAP3-204ENST00000453171 CCNB3Q8WWL7 1395 aa18.72■□□□□ 0.59
KRTCAP3-204ENST00000453171 EFCAB2Q5VUJ9 269 aa18.72■□□□□ 0.59
KRTCAP3-204ENST00000453171 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
KRTCAP3-204ENST00000453171 APLP2Q06481 763 aa18.71■□□□□ 0.59
KRTCAP3-204ENST00000453171 ABCC1P33527 1531 aa18.7■□□□□ 0.58
KRTCAP3-204ENST00000453171 SAMD9LQ8IVG5 1584 aa18.7■□□□□ 0.58
KRTCAP3-204ENST00000453171 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
KRTCAP3-204ENST00000453171 SCAPERQ9BY12 1400 aa18.67■□□□□ 0.58
KRTCAP3-204ENST00000453171 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
KRTCAP3-204ENST00000453171 ZMYM4Q5VZL5 1548 aa18.66■□□□□ 0.58
KRTCAP3-204ENST00000453171 RAPGEF3O95398 923 aa18.65■□□□□ 0.58
KRTCAP3-204ENST00000453171 ARHGEF12Q9NZN5 1544 aa18.64■□□□□ 0.58
KRTCAP3-204ENST00000453171 CFDP1Q9UEE9 299 aaPredicted RBP18.64■□□□□ 0.57
KRTCAP3-204ENST00000453171 SYCP2Q9BX26 1530 aa18.63■□□□□ 0.57
KRTCAP3-204ENST00000453171 KDM5CP41229 1560 aa18.63■□□□□ 0.57
KRTCAP3-204ENST00000453171 ZNF518AQ6AHZ1 1483 aa18.62■□□□□ 0.57
KRTCAP3-204ENST00000453171 PLEKHH2Q8IVE3 1493 aa18.61■□□□□ 0.57
KRTCAP3-204ENST00000453171 MYOM3Q5VTT5 1437 aa18.61■□□□□ 0.57
KRTCAP3-204ENST00000453171 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
KRTCAP3-204ENST00000453171 ARHGEF40Q8TER5 1519 aa18.59■□□□□ 0.57
KRTCAP3-204ENST00000453171 TRAPPC8Q9Y2L5 1435 aa18.59■□□□□ 0.57
KRTCAP3-204ENST00000453171 ZNF777Q9ULD5 760 aaPredicted RBP18.59■□□□□ 0.57
KRTCAP3-204ENST00000453171 CAMSAP2Q08AD1 1489 aa18.58■□□□□ 0.57
KRTCAP3-204ENST00000453171 MAGI2Q86UL8 1455 aa18.58■□□□□ 0.56
KRTCAP3-204ENST00000453171 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
KRTCAP3-204ENST00000453171 HECW2Q9P2P5 1572 aa18.57■□□□□ 0.56
KRTCAP3-204ENST00000453171 ZNF644Q9H582 1327 aaPredicted RBP18.56■□□□□ 0.56
KRTCAP3-204ENST00000453171 ZFYVE16Q7Z3T8 1539 aa18.55■□□□□ 0.56
KRTCAP3-204ENST00000453171 MBD5Q9P267 1494 aa18.55■□□□□ 0.56
KRTCAP3-204ENST00000453171 AFAP1Q8N556 730 aa18.54■□□□□ 0.56
KRTCAP3-204ENST00000453171 MLH3Q9UHC1 1453 aa18.53■□□□□ 0.56
KRTCAP3-204ENST00000453171 KIDINS220Q9ULH0 1771 aa18.53■□□□□ 0.56
KRTCAP3-204ENST00000453171 HNRNPMP52272 730 aaKnown RBP eCLIP18.53■□□□□ 0.56
KRTCAP3-204ENST00000453171 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
KRTCAP3-204ENST00000453171 PTPN23Q9H3S7 1636 aa18.52■□□□□ 0.56
KRTCAP3-204ENST00000453171 ARHGEF5Q12774 1597 aa18.52■□□□□ 0.56
KRTCAP3-204ENST00000453171 FGD6Q6ZV73 1430 aa18.52■□□□□ 0.56
KRTCAP3-204ENST00000453171 INO80Q9ULG1 1556 aaPredicted RBP18.51■□□□□ 0.55
KRTCAP3-204ENST00000453171 ABCA6Q8N139 1617 aa18.51■□□□□ 0.55
KRTCAP3-204ENST00000453171 DIP2CQ9Y2E4 1556 aa18.5■□□□□ 0.55
KRTCAP3-204ENST00000453171 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
KRTCAP3-204ENST00000453171 CCDC141Q6ZP82 1450 aa18.49■□□□□ 0.55
KRTCAP3-204ENST00000453171 SIGLEC1Q9BZZ2 1709 aa18.49■□□□□ 0.55
KRTCAP3-204ENST00000453171 ATP7AQ04656 1500 aa18.48■□□□□ 0.55
KRTCAP3-204ENST00000453171 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
KRTCAP3-204ENST00000453171 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
KRTCAP3-204ENST00000453171 REREQ9P2R6 1566 aa18.45■□□□□ 0.54
KRTCAP3-204ENST00000453171 SPAG9O60271 1321 aaKnown RBP18.45■□□□□ 0.54
KRTCAP3-204ENST00000453171 ATP10AO60312 1499 aa18.45■□□□□ 0.54
KRTCAP3-204ENST00000453171 C9orf84Q5VXU9 1444 aa18.44■□□□□ 0.54
KRTCAP3-204ENST00000453171 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
KRTCAP3-204ENST00000453171 DNMT1P26358 1616 aaKnown RBP18.43■□□□□ 0.54
KRTCAP3-204ENST00000453171 RSPH4AQ5TD94 716 aa18.43■□□□□ 0.54
KRTCAP3-204ENST00000453171 RTEL1-TNFRSF6BF6WH68 1400 aa18.42■□□□□ 0.54
KRTCAP3-204ENST00000453171 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
KRTCAP3-204ENST00000453171 BCORL1Q5H9F3 1711 aa18.4■□□□□ 0.54
KRTCAP3-204ENST00000453171 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
KRTCAP3-204ENST00000453171 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
KRTCAP3-204ENST00000453171 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.53
KRTCAP3-204ENST00000453171 ABCC5O15440 1437 aa18.38■□□□□ 0.53
KRTCAP3-204ENST00000453171 DAPK1P53355 1430 aa18.38■□□□□ 0.53
KRTCAP3-204ENST00000453171 ADAMTSL3P82987 1691 aa18.38■□□□□ 0.53
KRTCAP3-204ENST00000453171 AGLP35573 1532 aa18.37■□□□□ 0.53
KRTCAP3-204ENST00000453171 KDM4FA0A1W2PPD8 638 aa18.36■□□□□ 0.53
KRTCAP3-204ENST00000453171 A2MP01023 1474 aa18.34■□□□□ 0.53
KRTCAP3-204ENST00000453171 RRBP1Q9P2E9 1410 aaKnown RBP18.34■□□□□ 0.53
KRTCAP3-204ENST00000453171 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
KRTCAP3-204ENST00000453171 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
KRTCAP3-204ENST00000453171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.52
KRTCAP3-204ENST00000453171 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
KRTCAP3-204ENST00000453171 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
KRTCAP3-204ENST00000453171 MADDQ8WXG6 1647 aa18.31■□□□□ 0.52
KRTCAP3-204ENST00000453171 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
KRTCAP3-204ENST00000453171 ADGRL2O95490 1459 aa18.28■□□□□ 0.52
KRTCAP3-204ENST00000453171 DHX29Q7Z478 1369 aaKnown RBP18.28■□□□□ 0.52
KRTCAP3-204ENST00000453171 RIMS1Q86UR5 1692 aaKnown RBP18.27■□□□□ 0.52
KRTCAP3-204ENST00000453171 PTPRKQ15262 1439 aa18.26■□□□□ 0.51
KRTCAP3-204ENST00000453171 DUOX2Q9NRD8 1548 aa18.25■□□□□ 0.51
KRTCAP3-204ENST00000453171 EIF2AK4Q9P2K8 1649 aaKnown RBP18.25■□□□□ 0.51
KRTCAP3-204ENST00000453171 NCOA1Q15788 1441 aa18.24■□□□□ 0.51
KRTCAP3-204ENST00000453171 KIF15Q9NS87 1388 aa18.24■□□□□ 0.51
KRTCAP3-204ENST00000453171 ANKRD30AQ9BXX3 1397 aa18.23■□□□□ 0.51
KRTCAP3-204ENST00000453171 MLECQ14165 292 aa18.23■□□□□ 0.51
KRTCAP3-204ENST00000453171 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
KRTCAP3-204ENST00000453171 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
KRTCAP3-204ENST00000453171 PTPRMP28827 1452 aa18.2■□□□□ 0.5
KRTCAP3-204ENST00000453171 ERBINQ96RT1 1412 aa18.2■□□□□ 0.5
KRTCAP3-204ENST00000453171 ROCK1Q13464 1354 aa18.19■□□□□ 0.5
KRTCAP3-204ENST00000453171 RRP7BPQ9NSQ0 103 aa18.19■□□□□ 0.5
KRTCAP3-204ENST00000453171 MROH1Q8NDA8 1641 aa18.18■□□□□ 0.5
KRTCAP3-204ENST00000453171 MROH2AA6NES4 1674 aa18.18■□□□□ 0.5
KRTCAP3-204ENST00000453171 KIF3BO15066 747 aa18.17■□□□□ 0.5
KRTCAP3-204ENST00000453171 CLTCQ00610 1675 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms