RNA–Protein interactions for RNA: ENST00000452977.5

CTDSP1-205, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-205ENST00000452977 ZFYVE16Q7Z3T8 1539 aa25.07■■□□□ 1.6
CTDSP1-205ENST00000452977 PCF11O94913 1555 aaKnown RBP25.06■■□□□ 1.6
CTDSP1-205ENST00000452977 FYCO1Q9BQS8 1478 aa25.06■■□□□ 1.6
CTDSP1-205ENST00000452977 HECW2Q9P2P5 1572 aa25.05■■□□□ 1.6
CTDSP1-205ENST00000452977 BCORL1Q5H9F3 1711 aa25.05■■□□□ 1.6
CTDSP1-205ENST00000452977 ARHGAP5Q13017 1502 aa25.03■■□□□ 1.6
CTDSP1-205ENST00000452977 PTPRMP28827 1452 aa25.02■■□□□ 1.6
CTDSP1-205ENST00000452977 LRRIQ1Q96JM4 1722 aa25.01■■□□□ 1.59
CTDSP1-205ENST00000452977 ZNF518AQ6AHZ1 1483 aa24.99■■□□□ 1.59
CTDSP1-205ENST00000452977 YEATS2Q9ULM3 1422 aa24.96■■□□□ 1.59
CTDSP1-205ENST00000452977 MADDQ8WXG6 1647 aa24.96■■□□□ 1.59
CTDSP1-205ENST00000452977 PREX2Q70Z35 1606 aa24.93■■□□□ 1.58
CTDSP1-205ENST00000452977 ATP10AO60312 1499 aa24.92■■□□□ 1.58
CTDSP1-205ENST00000452977 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
CTDSP1-205ENST00000452977 CDC42BPBQ9Y5S2 1711 aa24.89■■□□□ 1.58
CTDSP1-205ENST00000452977 KDM5CP41229 1560 aa24.89■■□□□ 1.58
CTDSP1-205ENST00000452977 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
CTDSP1-205ENST00000452977 RIMS1Q86UR5 1692 aaKnown RBP24.88■■□□□ 1.57
CTDSP1-205ENST00000452977 ABCC1P33527 1531 aa24.85■■□□□ 1.57
CTDSP1-205ENST00000452977 AFAP1Q8N556 730 aa24.84■■□□□ 1.57
CTDSP1-205ENST00000452977 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.56
CTDSP1-205ENST00000452977 MTUS2Q5JR59 1369 aa24.81■■□□□ 1.56
CTDSP1-205ENST00000452977 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
CTDSP1-205ENST00000452977 FER1L4A9Z1Z3 1794 aa24.8■■□□□ 1.56
CTDSP1-205ENST00000452977 MLECQ14165 292 aa24.8■■□□□ 1.56
CTDSP1-205ENST00000452977 REREQ9P2R6 1566 aa24.8■■□□□ 1.56
CTDSP1-205ENST00000452977 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
CTDSP1-205ENST00000452977 ITSN2Q9NZM3 1697 aa24.79■■□□□ 1.56
CTDSP1-205ENST00000452977 SIGLEC1Q9BZZ2 1709 aa24.78■■□□□ 1.56
CTDSP1-205ENST00000452977 ARHGEF12Q9NZN5 1544 aa24.78■■□□□ 1.56
CTDSP1-205ENST00000452977 PLEKHH2Q8IVE3 1493 aa24.77■■□□□ 1.56
CTDSP1-205ENST00000452977 DIP2CQ9Y2E4 1556 aa24.76■■□□□ 1.55
CTDSP1-205ENST00000452977 CCNB3Q8WWL7 1395 aa24.76■■□□□ 1.55
CTDSP1-205ENST00000452977 TRAPPC8Q9Y2L5 1435 aa24.76■■□□□ 1.55
CTDSP1-205ENST00000452977 GPATCH8Q9UKJ3 1502 aaKnown RBP24.76■■□□□ 1.55
CTDSP1-205ENST00000452977 ZNF777Q9ULD5 760 aaPredicted RBP24.74■■□□□ 1.55
CTDSP1-205ENST00000452977 LMTK3Q96Q04 1460 aa24.74■■□□□ 1.55
CTDSP1-205ENST00000452977 EHBP1L1Q8N3D4 1523 aa24.73■■□□□ 1.55
CTDSP1-205ENST00000452977 CFDP1Q9UEE9 299 aaPredicted RBP24.73■■□□□ 1.55
CTDSP1-205ENST00000452977 KIAA1107Q9UPP5 1409 aa24.71■■□□□ 1.55
CTDSP1-205ENST00000452977 ABCA6Q8N139 1617 aa24.71■■□□□ 1.55
CTDSP1-205ENST00000452977 AGLP35573 1532 aa24.71■■□□□ 1.55
CTDSP1-205ENST00000452977 SAMD9LQ8IVG5 1584 aa24.7■■□□□ 1.54
CTDSP1-205ENST00000452977 PLPPR3Q6T4P5 718 aa24.69■■□□□ 1.54
CTDSP1-205ENST00000452977 ESF1Q9H501 851 aaKnown RBP24.69■■□□□ 1.54
CTDSP1-205ENST00000452977 SYCP2Q9BX26 1530 aa24.69■■□□□ 1.54
CTDSP1-205ENST00000452977 SPAG9O60271 1321 aaKnown RBP24.66■■□□□ 1.54
CTDSP1-205ENST00000452977 KIDINS220Q9ULH0 1771 aa24.66■■□□□ 1.54
CTDSP1-205ENST00000452977 ILDR1Q86SU0 546 aaPredicted RBP24.62■■□□□ 1.53
CTDSP1-205ENST00000452977 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
CTDSP1-205ENST00000452977 HNRNPMP52272 730 aaKnown RBP eCLIP24.61■■□□□ 1.53
CTDSP1-205ENST00000452977 TIAM1Q13009 1591 aa24.6■■□□□ 1.53
CTDSP1-205ENST00000452977 ATP7AQ04656 1500 aa24.6■■□□□ 1.53
CTDSP1-205ENST00000452977 PREX1Q8TCU6 1659 aa24.59■■□□□ 1.53
CTDSP1-205ENST00000452977 SETD1BQ9UPS6 1966 aaKnown RBP24.57■■□□□ 1.52
CTDSP1-205ENST00000452977 SUPT6HQ7KZ85 1726 aaKnown RBP24.57■■□□□ 1.52
CTDSP1-205ENST00000452977 INO80Q9ULG1 1556 aaPredicted RBP24.56■■□□□ 1.52
CTDSP1-205ENST00000452977 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
CTDSP1-205ENST00000452977 UHRF1BP1Q6BDS2 1440 aa24.55■■□□□ 1.52
CTDSP1-205ENST00000452977 HSPA2P54652 639 aa24.55■■□□□ 1.52
CTDSP1-205ENST00000452977 CEBPAP49715 358 aaPredicted RBP24.53■■□□□ 1.52
CTDSP1-205ENST00000452977 A2MP01023 1474 aa24.52■■□□□ 1.52
CTDSP1-205ENST00000452977 RSPH4AQ5TD94 716 aa24.52■■□□□ 1.52
CTDSP1-205ENST00000452977 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
CTDSP1-205ENST00000452977 RTEL1-TNFRSF6BF6WH68 1400 aa24.5■■□□□ 1.51
CTDSP1-205ENST00000452977 PLXNC1O60486 1568 aa24.5■■□□□ 1.51
CTDSP1-205ENST00000452977 C3P01024 1663 aa24.5■■□□□ 1.51
CTDSP1-205ENST00000452977 ADGBQ8N7X0 1667 aa24.49■■□□□ 1.51
CTDSP1-205ENST00000452977 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
CTDSP1-205ENST00000452977 MBD5Q9P267 1494 aa24.48■■□□□ 1.51
CTDSP1-205ENST00000452977 MROH2AA6NES4 1674 aa24.47■■□□□ 1.51
CTDSP1-205ENST00000452977 PPP6R1Q9UPN7 881 aa24.47■■□□□ 1.51
CTDSP1-205ENST00000452977 DMRT2Q9Y5R5 561 aa24.47■■□□□ 1.51
CTDSP1-205ENST00000452977 MAP3K1Q13233 1512 aa24.46■■□□□ 1.51
CTDSP1-205ENST00000452977 ZNF644Q9H582 1327 aaPredicted RBP24.46■■□□□ 1.51
CTDSP1-205ENST00000452977 FBXO41Q8TF61 875 aa24.46■■□□□ 1.51
CTDSP1-205ENST00000452977 CCDC141Q6ZP82 1450 aa24.45■■□□□ 1.51
CTDSP1-205ENST00000452977 LRRC9Q6ZRR7 1453 aa24.45■■□□□ 1.5
CTDSP1-205ENST00000452977 CAMSAP2Q08AD1 1489 aa24.44■■□□□ 1.5
CTDSP1-205ENST00000452977 NPATQ14207 1427 aa24.44■■□□□ 1.5
CTDSP1-205ENST00000452977 ZMYM3Q14202 1370 aa24.41■■□□□ 1.5
CTDSP1-205ENST00000452977 GGT6Q6P531 493 aa24.39■■□□□ 1.49
CTDSP1-205ENST00000452977 TSPY4P0CV99 314 aa24.38■■□□□ 1.49
CTDSP1-205ENST00000452977 TSPY10P0CW01 314 aa24.38■■□□□ 1.49
CTDSP1-205ENST00000452977 DHX29Q7Z478 1369 aaKnown RBP24.38■■□□□ 1.49
CTDSP1-205ENST00000452977 ARHGEF5Q12774 1597 aa24.37■■□□□ 1.49
CTDSP1-205ENST00000452977 APLP2Q06481 763 aa24.37■■□□□ 1.49
CTDSP1-205ENST00000452977 CLTCQ00610 1675 aaKnown RBP24.34■■□□□ 1.49
CTDSP1-205ENST00000452977 FAM135AQ9P2D6 1515 aa24.34■■□□□ 1.49
CTDSP1-205ENST00000452977 MIA2Q96PC5 1412 aa24.33■■□□□ 1.49
CTDSP1-205ENST00000452977 PTPRTO14522 1441 aa24.3■■□□□ 1.48
CTDSP1-205ENST00000452977 STRCQ7RTU9 1775 aa24.29■■□□□ 1.48
CTDSP1-205ENST00000452977 MYOM3Q5VTT5 1437 aa24.29■■□□□ 1.48
CTDSP1-205ENST00000452977 KIF3BO15066 747 aa24.28■■□□□ 1.48
CTDSP1-205ENST00000452977 CERKQ8TCT0 537 aa24.28■■□□□ 1.48
CTDSP1-205ENST00000452977 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
CTDSP1-205ENST00000452977 KANK4Q5T7N3 995 aaPredicted RBP24.26■■□□□ 1.47
CTDSP1-205ENST00000452977 NCOA1Q15788 1441 aa24.26■■□□□ 1.47
CTDSP1-205ENST00000452977 KDM5DQ9BY66 1539 aa24.25■■□□□ 1.47
CTDSP1-205ENST00000452977 MAST1Q9Y2H9 1570 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms