RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 CDK11AQ9UQ88 783 aaPredicted RBP29.98■■■□□ 2.39
HIGD1A-204ENST00000452906 EHBP1L1Q8N3D4 1523 aa29.96■■■□□ 2.39
HIGD1A-204ENST00000452906 MYO5CQ9NQX4 1742 aa29.96■■■□□ 2.39
HIGD1A-204ENST00000452906 KANK4Q5T7N3 995 aaPredicted RBP29.94■■■□□ 2.38
HIGD1A-204ENST00000452906 ARHGEF40Q8TER5 1519 aa29.94■■■□□ 2.38
HIGD1A-204ENST00000452906 PLCH2O75038 1416 aa29.93■■■□□ 2.38
HIGD1A-204ENST00000452906 KIF14Q15058 1648 aa29.93■■■□□ 2.38
HIGD1A-204ENST00000452906 ZMYM4Q5VZL5 1548 aa29.92■■■□□ 2.38
HIGD1A-204ENST00000452906 ADAMTSL3P82987 1691 aa29.91■■■□□ 2.38
HIGD1A-204ENST00000452906 MTUS2Q5JR59 1369 aa29.9■■■□□ 2.38
HIGD1A-204ENST00000452906 TROQ12816 1431 aaPredicted RBP29.89■■■□□ 2.38
HIGD1A-204ENST00000452906 SUPT6HQ7KZ85 1726 aaKnown RBP29.89■■■□□ 2.38
HIGD1A-204ENST00000452906 BCORL1Q5H9F3 1711 aa29.88■■■□□ 2.37
HIGD1A-204ENST00000452906 HECW2Q9P2P5 1572 aa29.86■■■□□ 2.37
HIGD1A-204ENST00000452906 MAGI2Q86UL8 1455 aa29.84■■■□□ 2.37
HIGD1A-204ENST00000452906 ZFYVE16Q7Z3T8 1539 aa29.81■■■□□ 2.36
HIGD1A-204ENST00000452906 POGZQ7Z3K3 1410 aa29.8■■■□□ 2.36
HIGD1A-204ENST00000452906 SCAPERQ9BY12 1400 aa29.79■■■□□ 2.36
HIGD1A-204ENST00000452906 EFCAB2Q5VUJ9 269 aa29.79■■■□□ 2.36
HIGD1A-204ENST00000452906 RRBP1Q9P2E9 1410 aaKnown RBP29.79■■■□□ 2.36
HIGD1A-204ENST00000452906 ARID4BQ4LE39 1312 aaPredicted RBP29.76■■■□□ 2.36
HIGD1A-204ENST00000452906 PTPRMP28827 1452 aa29.76■■■□□ 2.35
HIGD1A-204ENST00000452906 MADDQ8WXG6 1647 aa29.76■■■□□ 2.35
HIGD1A-204ENST00000452906 ARHGAP5Q13017 1502 aa29.75■■■□□ 2.35
HIGD1A-204ENST00000452906 CDC42BPBQ9Y5S2 1711 aa29.74■■■□□ 2.35
HIGD1A-204ENST00000452906 PREX2Q70Z35 1606 aa29.72■■■□□ 2.35
HIGD1A-204ENST00000452906 YEATS2Q9ULM3 1422 aa29.71■■■□□ 2.35
HIGD1A-204ENST00000452906 NCOA2Q15596 1464 aa29.71■■■□□ 2.35
HIGD1A-204ENST00000452906 ZNF518AQ6AHZ1 1483 aa29.69■■■□□ 2.34
HIGD1A-204ENST00000452906 CCNB3Q8WWL7 1395 aa29.68■■■□□ 2.34
HIGD1A-204ENST00000452906 SIGLEC1Q9BZZ2 1709 aa29.68■■■□□ 2.34
HIGD1A-204ENST00000452906 RIMS1Q86UR5 1692 aaKnown RBP29.67■■■□□ 2.34
HIGD1A-204ENST00000452906 KDM5CP41229 1560 aa29.66■■■□□ 2.34
HIGD1A-204ENST00000452906 CDC42BPAQ5VT25 1732 aa29.65■■■□□ 2.34
HIGD1A-204ENST00000452906 ATP10AO60312 1499 aa29.63■■■□□ 2.33
HIGD1A-204ENST00000452906 MYOM3Q5VTT5 1437 aa29.62■■■□□ 2.33
HIGD1A-204ENST00000452906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.62■■■□□ 2.33
HIGD1A-204ENST00000452906 C9orf84Q5VXU9 1444 aa29.61■■■□□ 2.33
HIGD1A-204ENST00000452906 FER1L4A9Z1Z3 1794 aa29.59■■■□□ 2.33
HIGD1A-204ENST00000452906 ABCC1P33527 1531 aa29.59■■■□□ 2.33
HIGD1A-204ENST00000452906 FGD6Q6ZV73 1430 aa29.58■■■□□ 2.33
HIGD1A-204ENST00000452906 ITSN2Q9NZM3 1697 aa29.58■■■□□ 2.33
HIGD1A-204ENST00000452906 MIA2Q96PC5 1412 aa29.54■■■□□ 2.32
HIGD1A-204ENST00000452906 MLH3Q9UHC1 1453 aa29.53■■■□□ 2.32
HIGD1A-204ENST00000452906 REREQ9P2R6 1566 aa29.52■■■□□ 2.32
HIGD1A-204ENST00000452906 AFAP1Q8N556 730 aa29.52■■■□□ 2.32
HIGD1A-204ENST00000452906 DIP2CQ9Y2E4 1556 aa29.52■■■□□ 2.32
HIGD1A-204ENST00000452906 ARHGEF12Q9NZN5 1544 aa29.51■■■□□ 2.32
HIGD1A-204ENST00000452906 PTPN23Q9H3S7 1636 aa29.49■■■□□ 2.31
HIGD1A-204ENST00000452906 ABCA6Q8N139 1617 aa29.48■■■□□ 2.31
HIGD1A-204ENST00000452906 LMTK3Q96Q04 1460 aa29.47■■■□□ 2.31
HIGD1A-204ENST00000452906 TRAPPC8Q9Y2L5 1435 aa29.46■■■□□ 2.31
HIGD1A-204ENST00000452906 GPATCH8Q9UKJ3 1502 aaKnown RBP29.46■■■□□ 2.31
HIGD1A-204ENST00000452906 TCOF1Q13428 1488 aaKnown RBP29.45■■■□□ 2.31
HIGD1A-204ENST00000452906 SAMD9LQ8IVG5 1584 aa29.44■■■□□ 2.3
HIGD1A-204ENST00000452906 MLECQ14165 292 aa29.44■■■□□ 2.3
HIGD1A-204ENST00000452906 MYT1LQ9UL68 1186 aa29.43■■■□□ 2.3
HIGD1A-204ENST00000452906 KIDINS220Q9ULH0 1771 aa29.43■■■□□ 2.3
HIGD1A-204ENST00000452906 FAM50AQ14320 339 aaKnown RBP29.4■■■□□ 2.3
HIGD1A-204ENST00000452906 AGLP35573 1532 aa29.4■■■□□ 2.3
HIGD1A-204ENST00000452906 PLEKHH2Q8IVE3 1493 aa29.39■■■□□ 2.3
HIGD1A-204ENST00000452906 SYCP2Q9BX26 1530 aa29.39■■■□□ 2.3
HIGD1A-204ENST00000452906 KIAA1107Q9UPP5 1409 aa29.37■■■□□ 2.29
HIGD1A-204ENST00000452906 ZNF777Q9ULD5 760 aaPredicted RBP29.34■■■□□ 2.29
HIGD1A-204ENST00000452906 CFDP1Q9UEE9 299 aaPredicted RBP29.33■■■□□ 2.29
HIGD1A-204ENST00000452906 PREX1Q8TCU6 1659 aa29.32■■■□□ 2.28
HIGD1A-204ENST00000452906 SETD1BQ9UPS6 1966 aaKnown RBP29.32■■■□□ 2.28
HIGD1A-204ENST00000452906 PLPPR3Q6T4P5 718 aa29.29■■■□□ 2.28
HIGD1A-204ENST00000452906 ILDR1Q86SU0 546 aaPredicted RBP29.29■■■□□ 2.28
HIGD1A-204ENST00000452906 INO80Q9ULG1 1556 aaPredicted RBP29.28■■■□□ 2.28
HIGD1A-204ENST00000452906 ATP7AQ04656 1500 aa29.27■■■□□ 2.28
HIGD1A-204ENST00000452906 SPAG9O60271 1321 aaKnown RBP29.26■■■□□ 2.27
HIGD1A-204ENST00000452906 DNMT1P26358 1616 aaKnown RBP29.24■■■□□ 2.27
HIGD1A-204ENST00000452906 HNRNPMP52272 730 aaKnown RBP eCLIP29.24■■■□□ 2.27
HIGD1A-204ENST00000452906 C3P01024 1663 aa29.24■■■□□ 2.27
HIGD1A-204ENST00000452906 CAMSAP2Q08AD1 1489 aa29.23■■■□□ 2.27
HIGD1A-204ENST00000452906 ITGAEP38570 1179 aa29.21■■■□□ 2.27
HIGD1A-204ENST00000452906 CNTLNQ9NXG0 1405 aa29.2■■■□□ 2.27
HIGD1A-204ENST00000452906 ADGBQ8N7X0 1667 aa29.19■■■□□ 2.26
HIGD1A-204ENST00000452906 PLXNC1O60486 1568 aa29.19■■■□□ 2.26
HIGD1A-204ENST00000452906 HSPA2P54652 639 aa29.19■■■□□ 2.26
HIGD1A-204ENST00000452906 ESF1Q9H501 851 aaKnown RBP29.19■■■□□ 2.26
HIGD1A-204ENST00000452906 CEBPAP49715 358 aaPredicted RBP29.18■■■□□ 2.26
HIGD1A-204ENST00000452906 MROH2AA6NES4 1674 aa29.18■■■□□ 2.26
HIGD1A-204ENST00000452906 A2MP01023 1474 aa29.15■■■□□ 2.26
HIGD1A-204ENST00000452906 MBD5Q9P267 1494 aa29.15■■■□□ 2.26
HIGD1A-204ENST00000452906 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
HIGD1A-204ENST00000452906 SETD5Q9C0A6 1442 aa29.14■■■□□ 2.26
HIGD1A-204ENST00000452906 ZEB1P37275 1124 aaPredicted RBP29.14■■■□□ 2.26
HIGD1A-204ENST00000452906 DAPK1P53355 1430 aa29.13■■■□□ 2.25
HIGD1A-204ENST00000452906 UHRF1BP1Q6BDS2 1440 aa29.13■■■□□ 2.25
HIGD1A-204ENST00000452906 HRCP23327 699 aa29.12■■■□□ 2.25
HIGD1A-204ENST00000452906 GCC2Q8IWJ2 1684 aa29.12■■■□□ 2.25
HIGD1A-204ENST00000452906 ARHGEF5Q12774 1597 aa29.11■■■□□ 2.25
HIGD1A-204ENST00000452906 ZNF644Q9H582 1327 aaPredicted RBP29.11■■■□□ 2.25
HIGD1A-204ENST00000452906 HFM1A2PYH4 1435 aa29.1■■■□□ 2.25
HIGD1A-204ENST00000452906 RTEL1-TNFRSF6BF6WH68 1400 aa29.1■■■□□ 2.25
HIGD1A-204ENST00000452906 CCER1Q8TC90 406 aaPredicted RBP29.08■■■□□ 2.25
HIGD1A-204ENST00000452906 ROCK1Q13464 1354 aa29.07■■■□□ 2.24
HIGD1A-204ENST00000452906 SHANK2Q9UPX8 1470 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms