RNA–Protein interactions for RNA: ENST00000452464.6

SCARB2-202, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2 BASIC

Gene SCARB2, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-202ENST00000452464 ZMYM4Q5VZL5 1548 aa19.34■□□□□ 0.69
SCARB2-202ENST00000452464 ILDR1Q86SU0 546 aaPredicted RBP19.34■□□□□ 0.69
SCARB2-202ENST00000452464 ZFYVE16Q7Z3T8 1539 aa19.33■□□□□ 0.68
SCARB2-202ENST00000452464 TROQ12816 1431 aaPredicted RBP19.31■□□□□ 0.68
SCARB2-202ENST00000452464 MADDQ8WXG6 1647 aa19.3■□□□□ 0.68
SCARB2-202ENST00000452464 MYO5CQ9NQX4 1742 aa19.29■□□□□ 0.68
SCARB2-202ENST00000452464 YEATS2Q9ULM3 1422 aa19.28■□□□□ 0.68
SCARB2-202ENST00000452464 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
SCARB2-202ENST00000452464 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
SCARB2-202ENST00000452464 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
SCARB2-202ENST00000452464 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
SCARB2-202ENST00000452464 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
SCARB2-202ENST00000452464 MLECQ14165 292 aa19.23■□□□□ 0.67
SCARB2-202ENST00000452464 ATP10AO60312 1499 aa19.23■□□□□ 0.67
SCARB2-202ENST00000452464 RIMS1Q86UR5 1692 aaKnown RBP19.23■□□□□ 0.67
SCARB2-202ENST00000452464 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
SCARB2-202ENST00000452464 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
SCARB2-202ENST00000452464 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
SCARB2-202ENST00000452464 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
SCARB2-202ENST00000452464 AFAP1Q8N556 730 aa19.19■□□□□ 0.66
SCARB2-202ENST00000452464 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
SCARB2-202ENST00000452464 LMTK3Q96Q04 1460 aa19.18■□□□□ 0.66
SCARB2-202ENST00000452464 CDC42BPAQ5VT25 1732 aa19.17■□□□□ 0.66
SCARB2-202ENST00000452464 SIGLEC1Q9BZZ2 1709 aa19.17■□□□□ 0.66
SCARB2-202ENST00000452464 PREX2Q70Z35 1606 aa19.15■□□□□ 0.66
SCARB2-202ENST00000452464 KDM5CP41229 1560 aa19.15■□□□□ 0.66
SCARB2-202ENST00000452464 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
SCARB2-202ENST00000452464 FER1L4A9Z1Z3 1794 aa19.13■□□□□ 0.65
SCARB2-202ENST00000452464 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
SCARB2-202ENST00000452464 MLH3Q9UHC1 1453 aa19.11■□□□□ 0.65
SCARB2-202ENST00000452464 FBXO41Q8TF61 875 aa19.11■□□□□ 0.65
SCARB2-202ENST00000452464 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
SCARB2-202ENST00000452464 HSPA2P54652 639 aa19.1■□□□□ 0.65
SCARB2-202ENST00000452464 ABCC1P33527 1531 aa19.08■□□□□ 0.64
SCARB2-202ENST00000452464 ZNF777Q9ULD5 760 aaPredicted RBP19.08■□□□□ 0.64
SCARB2-202ENST00000452464 ITSN2Q9NZM3 1697 aa19.07■□□□□ 0.64
SCARB2-202ENST00000452464 REREQ9P2R6 1566 aa19.07■□□□□ 0.64
SCARB2-202ENST00000452464 TRAPPC8Q9Y2L5 1435 aa19.06■□□□□ 0.64
SCARB2-202ENST00000452464 DIP2CQ9Y2E4 1556 aa19.05■□□□□ 0.64
SCARB2-202ENST00000452464 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
SCARB2-202ENST00000452464 CEBPAP49715 358 aaPredicted RBP19.03■□□□□ 0.64
SCARB2-202ENST00000452464 CFDP1Q9UEE9 299 aaPredicted RBP19.03■□□□□ 0.64
SCARB2-202ENST00000452464 AGLP35573 1532 aa19.02■□□□□ 0.64
SCARB2-202ENST00000452464 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
SCARB2-202ENST00000452464 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
SCARB2-202ENST00000452464 ABCA6Q8N139 1617 aa19.01■□□□□ 0.63
SCARB2-202ENST00000452464 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
SCARB2-202ENST00000452464 GPATCH8Q9UKJ3 1502 aaKnown RBP19.01■□□□□ 0.63
SCARB2-202ENST00000452464 SPAG9O60271 1321 aaKnown RBP19.01■□□□□ 0.63
SCARB2-202ENST00000452464 UHRF1BP1Q6BDS2 1440 aa19■□□□□ 0.63
SCARB2-202ENST00000452464 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
SCARB2-202ENST00000452464 PREX1Q8TCU6 1659 aa19■□□□□ 0.63
SCARB2-202ENST00000452464 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
SCARB2-202ENST00000452464 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.63
SCARB2-202ENST00000452464 CNTLNQ9NXG0 1405 aa18.98■□□□□ 0.63
SCARB2-202ENST00000452464 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
SCARB2-202ENST00000452464 EHBP1L1Q8N3D4 1523 aa18.98■□□□□ 0.63
SCARB2-202ENST00000452464 SYCP2Q9BX26 1530 aa18.97■□□□□ 0.63
SCARB2-202ENST00000452464 KIDINS220Q9ULH0 1771 aa18.96■□□□□ 0.63
SCARB2-202ENST00000452464 SETD1BQ9UPS6 1966 aaKnown RBP18.96■□□□□ 0.63
SCARB2-202ENST00000452464 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
SCARB2-202ENST00000452464 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
SCARB2-202ENST00000452464 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
SCARB2-202ENST00000452464 ATP7AQ04656 1500 aa18.91■□□□□ 0.62
SCARB2-202ENST00000452464 C3P01024 1663 aa18.89■□□□□ 0.61
SCARB2-202ENST00000452464 A2MP01023 1474 aa18.87■□□□□ 0.61
SCARB2-202ENST00000452464 NCOA2Q15596 1464 aa18.86■□□□□ 0.61
SCARB2-202ENST00000452464 NPATQ14207 1427 aa18.86■□□□□ 0.61
SCARB2-202ENST00000452464 GGT6Q6P531 493 aa18.85■□□□□ 0.61
SCARB2-202ENST00000452464 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
SCARB2-202ENST00000452464 ZMYM3Q14202 1370 aa18.85■□□□□ 0.61
SCARB2-202ENST00000452464 INO80Q9ULG1 1556 aaPredicted RBP18.85■□□□□ 0.61
SCARB2-202ENST00000452464 ZNF644Q9H582 1327 aaPredicted RBP18.84■□□□□ 0.61
SCARB2-202ENST00000452464 RSPH4AQ5TD94 716 aa18.84■□□□□ 0.61
SCARB2-202ENST00000452464 MROH2AA6NES4 1674 aa18.83■□□□□ 0.61
SCARB2-202ENST00000452464 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
SCARB2-202ENST00000452464 RTEL1-TNFRSF6BF6WH68 1400 aa18.82■□□□□ 0.6
SCARB2-202ENST00000452464 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
SCARB2-202ENST00000452464 PTPRTO14522 1441 aa18.81■□□□□ 0.6
SCARB2-202ENST00000452464 STRCQ7RTU9 1775 aa18.8■□□□□ 0.6
SCARB2-202ENST00000452464 MBD5Q9P267 1494 aa18.8■□□□□ 0.6
SCARB2-202ENST00000452464 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
SCARB2-202ENST00000452464 KANK4Q5T7N3 995 aaPredicted RBP18.78■□□□□ 0.6
SCARB2-202ENST00000452464 CAMSAP2Q08AD1 1489 aa18.78■□□□□ 0.6
SCARB2-202ENST00000452464 DHX29Q7Z478 1369 aaKnown RBP18.76■□□□□ 0.59
SCARB2-202ENST00000452464 CCDC141Q6ZP82 1450 aa18.76■□□□□ 0.59
SCARB2-202ENST00000452464 TSPY4P0CV99 314 aa18.76■□□□□ 0.59
SCARB2-202ENST00000452464 TSPY10P0CW01 314 aa18.76■□□□□ 0.59
SCARB2-202ENST00000452464 NCOA1Q15788 1441 aa18.76■□□□□ 0.59
SCARB2-202ENST00000452464 CLTCQ00610 1675 aaKnown RBP18.75■□□□□ 0.59
SCARB2-202ENST00000452464 MAP3K1Q13233 1512 aa18.75■□□□□ 0.59
SCARB2-202ENST00000452464 KIF3BO15066 747 aa18.73■□□□□ 0.59
SCARB2-202ENST00000452464 CAMSAP1Q5T5Y3 1602 aa18.72■□□□□ 0.59
SCARB2-202ENST00000452464 PTPRKQ15262 1439 aa18.72■□□□□ 0.59
SCARB2-202ENST00000452464 PKD2Q13563 968 aa18.71■□□□□ 0.59
SCARB2-202ENST00000452464 WASHC2CQ9Y4E1 1318 aa18.69■□□□□ 0.58
SCARB2-202ENST00000452464 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
SCARB2-202ENST00000452464 MYO3AQ8NEV4 1616 aa18.68■□□□□ 0.58
SCARB2-202ENST00000452464 ARHGEF5Q12774 1597 aa18.68■□□□□ 0.58
SCARB2-202ENST00000452464 FAM135AQ9P2D6 1515 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms