RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
VPS8-211ENST00000452140 NLRP6P59044 892 aa9.38□□□□□ -0.91
VPS8-211ENST00000452140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.912e-10■■■■■ 46.3
VPS8-211ENST00000452140 SOX12O15370 315 aa9.37□□□□□ -0.91
VPS8-211ENST00000452140 PDCD7Q8N8D1 485 aaKnown RBP9.37□□□□□ -0.91
VPS8-211ENST00000452140 ST18O60284 1047 aa9.36□□□□□ -0.91
VPS8-211ENST00000452140 C3orf67Q6ZVT6 689 aa9.36□□□□□ -0.91
VPS8-211ENST00000452140 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
VPS8-211ENST00000452140 TMEM121BQ9BXQ6 578 aaPredicted RBP9.33□□□□□ -0.92
VPS8-211ENST00000452140 CDAN1Q8IWY9 1227 aa9.31□□□□□ -0.92
VPS8-211ENST00000452140 ILDR1Q86SU0 546 aaPredicted RBP9.3□□□□□ -0.92
VPS8-211ENST00000452140 G3V3G9 751 aa9.29□□□□□ -0.92
VPS8-211ENST00000452140 NBR1Q14596 966 aa9.26□□□□□ -0.93
VPS8-211ENST00000452140 WDR70Q9NW82 654 aa9.25□□□□□ -0.93
VPS8-211ENST00000452140 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
VPS8-211ENST00000452140 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
VPS8-211ENST00000452140 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
VPS8-211ENST00000452140 KCNV2Q8TDN2 545 aa9.21□□□□□ -0.94
VPS8-211ENST00000452140 NCKAP5LQ9HCH0 1330 aa9.21□□□□□ -0.94
VPS8-211ENST00000452140 MARVELD3Q96A59 401 aa9.2□□□□□ -0.94
VPS8-211ENST00000452140 P3H3Q8IVL6 736 aa9.18□□□□□ -0.94
VPS8-211ENST00000452140 EMP3P54852 163 aa9.17□□□□□ -0.94
VPS8-211ENST00000452140 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
VPS8-211ENST00000452140 LARP6Q9BRS8 491 aaKnown RBP9.17□□□□□ -0.94
VPS8-211ENST00000452140 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
VPS8-211ENST00000452140 PDE4AP27815 886 aa9.13□□□□□ -0.95
VPS8-211ENST00000452140 E2F4Q16254 413 aa9.12□□□□□ -0.95
VPS8-211ENST00000452140 MICALL2Q8IY33 904 aa9.12□□□□□ -0.95
VPS8-211ENST00000452140 ZNF710Q8N1W2 664 aa9.11□□□□□ -0.95
VPS8-211ENST00000452140 DDX27Q96GQ7 796 aaKnown RBP9.11□□□□□ -0.95
VPS8-211ENST00000452140 MFSD10Q14728 455 aa9.1□□□□□ -0.95
VPS8-211ENST00000452140 DOK7Q18PE1 504 aa9.1□□□□□ -0.95
VPS8-211ENST00000452140 FAM205CA6NFA0 338 aa9.08□□□□□ -0.96
VPS8-211ENST00000452140 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
VPS8-211ENST00000452140 SPNS2Q8IVW8 549 aa9.08□□□□□ -0.96
VPS8-211ENST00000452140 HS3ST6Q96QI5 342 aa9.08□□□□□ -0.96
VPS8-211ENST00000452140 HOXB3P14651 431 aaPredicted RBP9.07□□□□□ -0.96
VPS8-211ENST00000452140 GPHNQ9NQX3 736 aaPredicted RBP9.06□□□□□ -0.96
VPS8-211ENST00000452140 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
VPS8-211ENST00000452140 MMRN1Q13201 1228 aa9.05□□□□□ -0.96
VPS8-211ENST00000452140 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
VPS8-211ENST00000452140 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
VPS8-211ENST00000452140 DSG2Q14126 1118 aa9.03□□□□□ -0.96
VPS8-211ENST00000452140 TMC2Q8TDI7 906 aa9.03□□□□□ -0.96
VPS8-211ENST00000452140 SEMA3EO15041 775 aa9.02□□□□□ -0.97
VPS8-211ENST00000452140 POTEB3A0JP26 581 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 C2orf72A6NCS6 295 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 POTEBQ6S5H4 581 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 ZSWIM6Q9HCJ5 1215 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 ERBB3P21860 1342 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 CAMK2BQ13554 666 aa9□□□□□ -0.97
VPS8-211ENST00000452140 TMEM92Q6UXU6 159 aa8.98□□□□□ -0.97
VPS8-211ENST00000452140 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
VPS8-211ENST00000452140 KRTAP3-2Q9BYR7 98 aa8.98□□□□□ -0.97
VPS8-211ENST00000452140 KIF3CO14782 793 aa8.97□□□□□ -0.97
VPS8-211ENST00000452140 FOXK1P85037 733 aa8.97□□□□□ -0.97
VPS8-211ENST00000452140 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
VPS8-211ENST00000452140 EMILIN3Q9NT22 766 aa8.97□□□□□ -0.97
VPS8-211ENST00000452140 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
VPS8-211ENST00000452140 TESPA1A2RU30 521 aaPredicted RBP8.95□□□□□ -0.98
VPS8-211ENST00000452140 DPYSL4O14531 572 aa8.95□□□□□ -0.98
VPS8-211ENST00000452140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
VPS8-211ENST00000452140 ARIH1Q9Y4X5 557 aaPredicted RBP8.94□□□□□ -0.98
VPS8-211ENST00000452140 VARS2Q5ST30 1063 aaKnown RBP8.93□□□□□ -0.98
VPS8-211ENST00000452140 TULP1O00294 542 aaPredicted RBP8.91□□□□□ -0.98
VPS8-211ENST00000452140 GPR153Q6NV75 609 aa8.91□□□□□ -0.98
VPS8-211ENST00000452140 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
VPS8-211ENST00000452140 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
VPS8-211ENST00000452140 PDIA6Q15084 440 aa8.87□□□□□ -0.99
VPS8-211ENST00000452140 ARSIQ5FYB1 569 aa8.87□□□□□ -0.99
VPS8-211ENST00000452140 ZNF687Q8N1G0 1237 aa8.87□□□□□ -0.99
VPS8-211ENST00000452140 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
VPS8-211ENST00000452140 RBM26Q5T8P6 1007 aaKnown RBP8.84□□□□□ -0.99
VPS8-211ENST00000452140 SMYD5Q6GMV2 418 aa8.84□□□□□ -0.99
VPS8-211ENST00000452140 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
VPS8-211ENST00000452140 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
VPS8-211ENST00000452140 OXER1Q8TDS5 423 aa8.82□□□□□ -1
VPS8-211ENST00000452140 ZNF316A6NFI3 1004 aaPredicted RBP8.81□□□□□ -1
VPS8-211ENST00000452140 GRXCR2A6NFK2 248 aa8.8□□□□□ -1
VPS8-211ENST00000452140 PTGER2P43116 358 aa8.8□□□□□ -1
VPS8-211ENST00000452140 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
VPS8-211ENST00000452140 SLC34A2O95436 690 aa8.79□□□□□ -1
VPS8-211ENST00000452140 MYT1LQ9UL68 1186 aa8.79□□□□□ -1
VPS8-211ENST00000452140 KHSRPQ92945 711 aaKnown RBP eCLIP8.78□□□□□ -1
VPS8-211ENST00000452140 EVI5O60447 810 aa8.77□□□□□ -1.01
VPS8-211ENST00000452140 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
VPS8-211ENST00000452140 DDX12PQ92771 950 aa8.77□□□□□ -1.01
VPS8-211ENST00000452140 NUDT7P0C024 238 aa8.76□□□□□ -1.01
VPS8-211ENST00000452140 ANKRD13DQ6ZTN6 518 aa8.76□□□□□ -1.01
VPS8-211ENST00000452140 TBC1D12O60347 775 aa8.75□□□□□ -1.01
VPS8-211ENST00000452140 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
VPS8-211ENST00000452140 PCDHGA4Q9Y5G9 962 aa8.75□□□□□ -1.01
VPS8-211ENST00000452140 PBX2P40425 430 aa8.74□□□□□ -1.01
VPS8-211ENST00000452140 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
VPS8-211ENST00000452140 ZMYND10O75800 440 aa8.73□□□□□ -1.01
VPS8-211ENST00000452140 OSBPP22059 807 aa8.72□□□□□ -1.01
VPS8-211ENST00000452140 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
VPS8-211ENST00000452140 PSDA5PKW4 1024 aaPredicted RBP8.71□□□□□ -1.02
VPS8-211ENST00000452140 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
VPS8-211ENST00000452140 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 485.9 ms