RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 RICTORQ6R327 1708 aa25.7■■□□□ 1.7
SCAMP4-205ENST00000452128 MTUS2Q5JR59 1369 aa25.69■■□□□ 1.7
SCAMP4-205ENST00000452128 POGZQ7Z3K3 1410 aa25.68■■□□□ 1.7
SCAMP4-205ENST00000452128 CDC42BPBQ9Y5S2 1711 aa25.67■■□□□ 1.7
SCAMP4-205ENST00000452128 ARHGAP5Q13017 1502 aa25.66■■□□□ 1.7
SCAMP4-205ENST00000452128 ZMYM4Q5VZL5 1548 aa25.66■■□□□ 1.7
SCAMP4-205ENST00000452128 ARHGEF12Q9NZN5 1544 aa25.64■■□□□ 1.7
SCAMP4-205ENST00000452128 PREX2Q70Z35 1606 aa25.64■■□□□ 1.7
SCAMP4-205ENST00000452128 MAGI2Q86UL8 1455 aa25.63■■□□□ 1.69
SCAMP4-205ENST00000452128 AFAP1Q8N556 730 aa25.62■■□□□ 1.69
SCAMP4-205ENST00000452128 CDC42BPAQ5VT25 1732 aa25.61■■□□□ 1.69
SCAMP4-205ENST00000452128 MAP3K1Q13233 1512 aa25.61■■□□□ 1.69
SCAMP4-205ENST00000452128 YEATS2Q9ULM3 1422 aa25.61■■□□□ 1.69
SCAMP4-205ENST00000452128 EHBP1L1Q8N3D4 1523 aa25.6■■□□□ 1.69
SCAMP4-205ENST00000452128 TIAM1Q13009 1591 aa25.59■■□□□ 1.69
SCAMP4-205ENST00000452128 TRAPPC8Q9Y2L5 1435 aa25.58■■□□□ 1.69
SCAMP4-205ENST00000452128 CCNB3Q8WWL7 1395 aa25.57■■□□□ 1.68
SCAMP4-205ENST00000452128 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
SCAMP4-205ENST00000452128 ARHGEF40Q8TER5 1519 aa25.57■■□□□ 1.68
SCAMP4-205ENST00000452128 ZNF518AQ6AHZ1 1483 aa25.56■■□□□ 1.68
SCAMP4-205ENST00000452128 ABCC1P33527 1531 aa25.56■■□□□ 1.68
SCAMP4-205ENST00000452128 KDM5CP41229 1560 aa25.56■■□□□ 1.68
SCAMP4-205ENST00000452128 LRRC9Q6ZRR7 1453 aa25.55■■□□□ 1.68
SCAMP4-205ENST00000452128 CFDP1Q9UEE9 299 aaPredicted RBP25.55■■□□□ 1.68
SCAMP4-205ENST00000452128 KIAA1107Q9UPP5 1409 aa25.54■■□□□ 1.68
SCAMP4-205ENST00000452128 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
SCAMP4-205ENST00000452128 NCOA2Q15596 1464 aa25.52■■□□□ 1.68
SCAMP4-205ENST00000452128 SAMD9LQ8IVG5 1584 aa25.52■■□□□ 1.68
SCAMP4-205ENST00000452128 MLH3Q9UHC1 1453 aa25.51■■□□□ 1.67
SCAMP4-205ENST00000452128 ZNF644Q9H582 1327 aaPredicted RBP25.5■■□□□ 1.67
SCAMP4-205ENST00000452128 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.672e-12■■□□□ 14.5
SCAMP4-205ENST00000452128 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
SCAMP4-205ENST00000452128 ATP10AO60312 1499 aa25.48■■□□□ 1.67
SCAMP4-205ENST00000452128 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
SCAMP4-205ENST00000452128 PLEKHH2Q8IVE3 1493 aa25.45■■□□□ 1.66
SCAMP4-205ENST00000452128 MBD5Q9P267 1494 aa25.45■■□□□ 1.66
SCAMP4-205ENST00000452128 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
SCAMP4-205ENST00000452128 ADAMTSL3P82987 1691 aa25.44■■□□□ 1.66
SCAMP4-205ENST00000452128 SYCP2Q9BX26 1530 aa25.42■■□□□ 1.66
SCAMP4-205ENST00000452128 SUPT6HQ7KZ85 1726 aaKnown RBP25.42■■□□□ 1.66
SCAMP4-205ENST00000452128 ARID4BQ4LE39 1312 aaPredicted RBP25.4■■□□□ 1.66
SCAMP4-205ENST00000452128 C9orf84Q5VXU9 1444 aa25.4■■□□□ 1.66
SCAMP4-205ENST00000452128 BCORL1Q5H9F3 1711 aa25.4■■□□□ 1.66
SCAMP4-205ENST00000452128 HECW2Q9P2P5 1572 aa25.39■■□□□ 1.66
SCAMP4-205ENST00000452128 DIP2CQ9Y2E4 1556 aa25.38■■□□□ 1.65
SCAMP4-205ENST00000452128 KIDINS220Q9ULH0 1771 aa25.36■■□□□ 1.65
SCAMP4-205ENST00000452128 SPAG9O60271 1321 aaKnown RBP25.36■■□□□ 1.65
SCAMP4-205ENST00000452128 REREQ9P2R6 1566 aa25.35■■□□□ 1.65
SCAMP4-205ENST00000452128 ABCA6Q8N139 1617 aa25.34■■□□□ 1.65
SCAMP4-205ENST00000452128 PTPRMP28827 1452 aa25.32■■□□□ 1.64
SCAMP4-205ENST00000452128 RSPH4AQ5TD94 716 aa25.31■■□□□ 1.64
SCAMP4-205ENST00000452128 AGLP35573 1532 aa25.31■■□□□ 1.64
SCAMP4-205ENST00000452128 MIA2Q96PC5 1412 aa25.3■■□□□ 1.64
SCAMP4-205ENST00000452128 CAMSAP2Q08AD1 1489 aa25.3■■□□□ 1.64
SCAMP4-205ENST00000452128 APLP2Q06481 763 aa25.3■■□□□ 1.64
SCAMP4-205ENST00000452128 MYOM3Q5VTT5 1437 aa25.29■■□□□ 1.64
SCAMP4-205ENST00000452128 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
SCAMP4-205ENST00000452128 MYT1LQ9UL68 1186 aa25.28■■□□□ 1.64
SCAMP4-205ENST00000452128 MADDQ8WXG6 1647 aa25.27■■□□□ 1.64
SCAMP4-205ENST00000452128 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
SCAMP4-205ENST00000452128 MLECQ14165 292 aa25.26■■□□□ 1.63
SCAMP4-205ENST00000452128 ATP7AQ04656 1500 aa25.26■■□□□ 1.63
SCAMP4-205ENST00000452128 CCDC141Q6ZP82 1450 aa25.22■■□□□ 1.63
SCAMP4-205ENST00000452128 ARHGEF5Q12774 1597 aa25.22■■□□□ 1.63
SCAMP4-205ENST00000452128 PLXNC1O60486 1568 aa25.19■■□□□ 1.62
SCAMP4-205ENST00000452128 A2MP01023 1474 aa25.19■■□□□ 1.62
SCAMP4-205ENST00000452128 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
SCAMP4-205ENST00000452128 FGD6Q6ZV73 1430 aa25.15■■□□□ 1.62
SCAMP4-205ENST00000452128 RIMS1Q86UR5 1692 aaKnown RBP25.14■■□□□ 1.62
SCAMP4-205ENST00000452128 TCOF1Q13428 1488 aaKnown RBP25.14■■□□□ 1.61
SCAMP4-205ENST00000452128 TSPY4P0CV99 314 aa25.13■■□□□ 1.61
SCAMP4-205ENST00000452128 TSPY10P0CW01 314 aa25.13■■□□□ 1.61
SCAMP4-205ENST00000452128 ABCC5O15440 1437 aa25.11■■□□□ 1.61
SCAMP4-205ENST00000452128 CEBPAP49715 358 aaPredicted RBP25.09■■□□□ 1.61
SCAMP4-205ENST00000452128 MAST1Q9Y2H9 1570 aa25.09■■□□□ 1.61
SCAMP4-205ENST00000452128 FER1L4A9Z1Z3 1794 aa25.08■■□□□ 1.61
SCAMP4-205ENST00000452128 PTPN23Q9H3S7 1636 aa25.08■■□□□ 1.6
SCAMP4-205ENST00000452128 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
SCAMP4-205ENST00000452128 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
SCAMP4-205ENST00000452128 CNTLNQ9NXG0 1405 aa25.03■■□□□ 1.6
SCAMP4-205ENST00000452128 LMTK3Q96Q04 1460 aa25.02■■□□□ 1.6
SCAMP4-205ENST00000452128 GGT6Q6P531 493 aa25.01■■□□□ 1.59
SCAMP4-205ENST00000452128 DAPK1P53355 1430 aa25.01■■□□□ 1.59
SCAMP4-205ENST00000452128 SHANK2Q9UPX8 1470 aa25.01■■□□□ 1.59
SCAMP4-205ENST00000452128 KIF3BO15066 747 aa25■■□□□ 1.59
SCAMP4-205ENST00000452128 ZMYM3Q14202 1370 aa25■■□□□ 1.59
SCAMP4-205ENST00000452128 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
SCAMP4-205ENST00000452128 DNMT1P26358 1616 aaKnown RBP24.96■■□□□ 1.59
SCAMP4-205ENST00000452128 PPARGC1BQ86YN6 1023 aaKnown RBP24.95■■□□□ 1.58
SCAMP4-205ENST00000452128 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.58
SCAMP4-205ENST00000452128 C3P01024 1663 aa24.93■■□□□ 1.58
SCAMP4-205ENST00000452128 NCOA1Q15788 1441 aa24.92■■□□□ 1.58
SCAMP4-205ENST00000452128 SETD1BQ9UPS6 1966 aaKnown RBP24.91■■□□□ 1.58
SCAMP4-205ENST00000452128 RRP7BPQ9NSQ0 103 aa24.91■■□□□ 1.58
SCAMP4-205ENST00000452128 KIF15Q9NS87 1388 aa24.91■■□□□ 1.58
SCAMP4-205ENST00000452128 MROH2AA6NES4 1674 aa24.91■■□□□ 1.58
SCAMP4-205ENST00000452128 NPATQ14207 1427 aa24.9■■□□□ 1.58
SCAMP4-205ENST00000452128 PTPRKQ15262 1439 aa24.9■■□□□ 1.58
SCAMP4-205ENST00000452128 CROCC2H7BZ55 1655 aa24.9■■□□□ 1.58
SCAMP4-205ENST00000452128 DUOX2Q9NRD8 1548 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 258.5 ms