RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 FANCAO15360 1455 aa37.5■■■■□ 3.59
CPSF4-207ENST00000451876 PPARGC1BQ86YN6 1023 aaKnown RBP37.49■■■■□ 3.59
CPSF4-207ENST00000451876 CFAP74Q9C0B2 1584 aa37.47■■■■□ 3.59
CPSF4-207ENST00000451876 NEO1Q92859 1461 aa37.44■■■■□ 3.58
CPSF4-207ENST00000451876 PHLDB1Q86UU1 1377 aa37.4■■■■□ 3.58
CPSF4-207ENST00000451876 AKNAQ7Z591 1439 aa37.37■■■■□ 3.57
CPSF4-207ENST00000451876 SAMD9LQ8IVG5 1584 aa37.37■■■■□ 3.57
CPSF4-207ENST00000451876 KDM6BO15054 1643 aa37.36■■■■□ 3.57
CPSF4-207ENST00000451876 MYOM3Q5VTT5 1437 aa37.36■■■■□ 3.57
CPSF4-207ENST00000451876 EFCAB2Q5VUJ9 269 aa37.36■■■■□ 3.57
CPSF4-207ENST00000451876 CFDP1Q9UEE9 299 aaPredicted RBP37.34■■■■□ 3.57
CPSF4-207ENST00000451876 COL17A1Q9UMD9 1497 aaPredicted RBP37.34■■■■□ 3.57
CPSF4-207ENST00000451876 ADGRL1O94910 1474 aa37.31■■■■□ 3.56
CPSF4-207ENST00000451876 ABCC1P33527 1531 aa37.3■■■■□ 3.56
CPSF4-207ENST00000451876 ZNF777Q9ULD5 760 aaPredicted RBP37.28■■■■□ 3.56
CPSF4-207ENST00000451876 RICTORQ6R327 1708 aa37.24■■■■□ 3.55
CPSF4-207ENST00000451876 ZNF644Q9H582 1327 aaPredicted RBP37.24■■■■□ 3.55
CPSF4-207ENST00000451876 MIA2Q96PC5 1412 aa37.24■■■■□ 3.55
CPSF4-207ENST00000451876 ARHGEF12Q9NZN5 1544 aa37.23■■■■□ 3.55
CPSF4-207ENST00000451876 CAMSAP2Q08AD1 1489 aa37.23■■■■□ 3.55
CPSF4-207ENST00000451876 SYCP2Q9BX26 1530 aa37.23■■■■□ 3.55
CPSF4-207ENST00000451876 FRMPD1Q5SYB0 1578 aa37.23■■■■□ 3.55
CPSF4-207ENST00000451876 SCAPERQ9BY12 1400 aa37.22■■■■□ 3.55
CPSF4-207ENST00000451876 FGD6Q6ZV73 1430 aa37.21■■■■□ 3.55
CPSF4-207ENST00000451876 PTPN23Q9H3S7 1636 aa37.2■■■■□ 3.54
CPSF4-207ENST00000451876 DENND4BO75064 1496 aaPredicted RBP37.18■■■■□ 3.54
CPSF4-207ENST00000451876 PLEKHH2Q8IVE3 1493 aa37.15■■■■□ 3.54
CPSF4-207ENST00000451876 RAPGEF3O95398 923 aa37.15■■■■□ 3.54
CPSF4-207ENST00000451876 POGZQ7Z3K3 1410 aa37.15■■■■□ 3.54
CPSF4-207ENST00000451876 KIAA1107Q9UPP5 1409 aa37.13■■■■□ 3.53
CPSF4-207ENST00000451876 TRAPPC8Q9Y2L5 1435 aa37.12■■■■□ 3.53
CPSF4-207ENST00000451876 TCOF1Q13428 1488 aaKnown RBP37.1■■■■□ 3.53
CPSF4-207ENST00000451876 MBD5Q9P267 1494 aa37.09■■■■□ 3.53
CPSF4-207ENST00000451876 HNRNPMP52272 730 aaKnown RBP eCLIP37.09■■■■□ 3.53
CPSF4-207ENST00000451876 ZNF518AQ6AHZ1 1483 aa37.08■■■■□ 3.53
CPSF4-207ENST00000451876 KDM5CP41229 1560 aa37.07■■■■□ 3.52
CPSF4-207ENST00000451876 ZMYM4Q5VZL5 1548 aa37.04■■■■□ 3.52
CPSF4-207ENST00000451876 AFAP1Q8N556 730 aa37.03■■■■□ 3.52
CPSF4-207ENST00000451876 ARHGEF5Q12774 1597 aa37.03■■■■□ 3.52
CPSF4-207ENST00000451876 CCDC141Q6ZP82 1450 aa36.98■■■■□ 3.51
CPSF4-207ENST00000451876 HECW2Q9P2P5 1572 aa36.97■■■■□ 3.51
CPSF4-207ENST00000451876 RRBP1Q9P2E9 1410 aaKnown RBP36.97■■■■□ 3.51
CPSF4-207ENST00000451876 DNMT1P26358 1616 aaKnown RBP36.96■■■■□ 3.51
CPSF4-207ENST00000451876 CROCC2H7BZ55 1655 aa36.95■■■■□ 3.5
CPSF4-207ENST00000451876 FAM50AQ14320 339 aaKnown RBP36.94■■■■□ 3.5
CPSF4-207ENST00000451876 KIDINS220Q9ULH0 1771 aa36.93■■■■□ 3.5
CPSF4-207ENST00000451876 INO80Q9ULG1 1556 aaPredicted RBP36.92■■■■□ 3.5
CPSF4-207ENST00000451876 MLH3Q9UHC1 1453 aa36.9■■■■□ 3.5
CPSF4-207ENST00000451876 ZFYVE16Q7Z3T8 1539 aa36.89■■■■□ 3.5
CPSF4-207ENST00000451876 ARHGEF40Q8TER5 1519 aa36.89■■■■□ 3.5
CPSF4-207ENST00000451876 YEATS2Q9ULM3 1422 aa36.88■■■■□ 3.5
CPSF4-207ENST00000451876 MAGI2Q86UL8 1455 aa36.88■■■■□ 3.49
CPSF4-207ENST00000451876 ATP7AQ04656 1500 aa36.87■■■■□ 3.49
CPSF4-207ENST00000451876 ABCC5O15440 1437 aa36.87■■■■□ 3.49
CPSF4-207ENST00000451876 DAPK1P53355 1430 aa36.87■■■■□ 3.49
CPSF4-207ENST00000451876 ABCA6Q8N139 1617 aa36.86■■■■□ 3.49
CPSF4-207ENST00000451876 RSPH4AQ5TD94 716 aa36.85■■■■□ 3.49
CPSF4-207ENST00000451876 SPAG9O60271 1321 aaKnown RBP36.84■■■■□ 3.49
CPSF4-207ENST00000451876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.84■■■■□ 3.49
CPSF4-207ENST00000451876 MAST1Q9Y2H9 1570 aa36.83■■■■□ 3.49
CPSF4-207ENST00000451876 DIP2CQ9Y2E4 1556 aa36.82■■■■□ 3.48
CPSF4-207ENST00000451876 SHANK2Q9UPX8 1470 aa36.79■■■■□ 3.48
CPSF4-207ENST00000451876 MYT1LQ9UL68 1186 aa36.79■■■■□ 3.48
CPSF4-207ENST00000451876 C9orf84Q5VXU9 1444 aa36.79■■■■□ 3.48
CPSF4-207ENST00000451876 RTEL1-TNFRSF6BF6WH68 1400 aa36.77■■■■□ 3.48
CPSF4-207ENST00000451876 TSPY4P0CV99 314 aa36.76■■■■□ 3.48
CPSF4-207ENST00000451876 TSPY10P0CW01 314 aa36.76■■■■□ 3.48
CPSF4-207ENST00000451876 ADGBQ8N7X0 1667 aa36.75■■■■□ 3.47
CPSF4-207ENST00000451876 SIGLEC1Q9BZZ2 1709 aa36.74■■■■□ 3.47
CPSF4-207ENST00000451876 PTPRKQ15262 1439 aa36.74■■■■□ 3.47
CPSF4-207ENST00000451876 PLXNC1O60486 1568 aa36.7■■■■□ 3.47
CPSF4-207ENST00000451876 ITGAEP38570 1179 aa36.69■■■■□ 3.46
CPSF4-207ENST00000451876 ATP10AO60312 1499 aa36.69■■■■□ 3.46
CPSF4-207ENST00000451876 CHIC2Q9UKJ5 165 aa36.67■■■■□ 3.46
CPSF4-207ENST00000451876 REREQ9P2R6 1566 aa36.64■■■■□ 3.46
CPSF4-207ENST00000451876 ADGRL2O95490 1459 aa36.63■■■■□ 3.45
CPSF4-207ENST00000451876 A2MP01023 1474 aa36.59■■■■□ 3.45
CPSF4-207ENST00000451876 NCOA1Q15788 1441 aa36.58■■■■□ 3.45
CPSF4-207ENST00000451876 ANKRD30AQ9BXX3 1397 aa36.55■■■■□ 3.44
CPSF4-207ENST00000451876 KIF15Q9NS87 1388 aa36.55■■■■□ 3.44
CPSF4-207ENST00000451876 RRP7BPQ9NSQ0 103 aa36.52■■■■□ 3.44
CPSF4-207ENST00000451876 DUOX2Q9NRD8 1548 aa36.51■■■■□ 3.43
CPSF4-207ENST00000451876 ROCK1Q13464 1354 aa36.5■■■■□ 3.43
CPSF4-207ENST00000451876 DHX29Q7Z478 1369 aaKnown RBP36.5■■■■□ 3.43
CPSF4-207ENST00000451876 AGLP35573 1532 aa36.5■■■■□ 3.43
CPSF4-207ENST00000451876 ARID4BQ4LE39 1312 aaPredicted RBP36.45■■■■□ 3.43
CPSF4-207ENST00000451876 BCORL1Q5H9F3 1711 aa36.45■■■■□ 3.43
CPSF4-207ENST00000451876 EIF2AK4Q9P2K8 1649 aaKnown RBP36.43■■■■□ 3.42
CPSF4-207ENST00000451876 GCC2Q8IWJ2 1684 aa36.41■■■■□ 3.42
CPSF4-207ENST00000451876 ERBINQ96RT1 1412 aa36.4■■■■□ 3.42
CPSF4-207ENST00000451876 ANKRD50Q9ULJ7 1429 aa36.36■■■■□ 3.41
CPSF4-207ENST00000451876 NAIPQ13075 1403 aa36.34■■■■□ 3.41
CPSF4-207ENST00000451876 MLECQ14165 292 aa36.34■■■■□ 3.41
CPSF4-207ENST00000451876 RNF17Q9BXT8 1623 aaKnown RBP36.33■■■■□ 3.41
CPSF4-207ENST00000451876 ADAMTSL3P82987 1691 aa36.33■■■■□ 3.41
CPSF4-207ENST00000451876 KIF3BO15066 747 aa36.33■■■■□ 3.41
CPSF4-207ENST00000451876 HFM1A2PYH4 1435 aa36.32■■■■□ 3.41
CPSF4-207ENST00000451876 MROH1Q8NDA8 1641 aa36.3■■■■□ 3.4
CPSF4-207ENST00000451876 DEPDC5O75140 1603 aa36.29■■■■□ 3.4
CPSF4-207ENST00000451876 MADDQ8WXG6 1647 aa36.29■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms