RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
HMGB3P22-202ENST00000451823 MFRPQ9BY79 579 aa8.89□□□□□ -0.99
HMGB3P22-202ENST00000451823 HOXB1P14653 301 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P22-202ENST00000451823 SPNS2Q8IVW8 549 aa8.85□□□□□ -0.99
HMGB3P22-202ENST00000451823 ERBB3P21860 1342 aa8.83□□□□□ -1
HMGB3P22-202ENST00000451823 RIMBP2O15034 1052 aa8.83□□□□□ -1
HMGB3P22-202ENST00000451823 MMRN1Q13201 1228 aa8.8□□□□□ -1
HMGB3P22-202ENST00000451823 GPR153Q6NV75 609 aa8.8□□□□□ -1
HMGB3P22-202ENST00000451823 PPP1R37O75864 691 aa8.79□□□□□ -1
HMGB3P22-202ENST00000451823 ARSIQ5FYB1 569 aa8.79□□□□□ -1
HMGB3P22-202ENST00000451823 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
HMGB3P22-202ENST00000451823 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
HMGB3P22-202ENST00000451823 ZSWIM6Q9HCJ5 1215 aa8.78□□□□□ -1
HMGB3P22-202ENST00000451823 C2orf72A6NCS6 295 aa8.77□□□□□ -1.01
HMGB3P22-202ENST00000451823 VARS2Q5ST30 1063 aaKnown RBP8.76□□□□□ -1.01
HMGB3P22-202ENST00000451823 KHSRPQ92945 711 aaKnown RBP eCLIP8.75□□□□□ -1.01
HMGB3P22-202ENST00000451823 KIF3CO14782 793 aa8.74□□□□□ -1.01
HMGB3P22-202ENST00000451823 CHGAP10645 457 aaKnown RBP8.74□□□□□ -1.01
HMGB3P22-202ENST00000451823 TMC2Q8TDI7 906 aa8.71□□□□□ -1.02
HMGB3P22-202ENST00000451823 HS6ST3Q8IZP7 471 aa8.7□□□□□ -1.02
HMGB3P22-202ENST00000451823 ZNF687Q8N1G0 1237 aa8.7□□□□□ -1.02
HMGB3P22-202ENST00000451823 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
HMGB3P22-202ENST00000451823 NUDT7P0C024 238 aa8.66□□□□□ -1.02
HMGB3P22-202ENST00000451823 PCDHGA4Q9Y5G9 962 aa8.65□□□□□ -1.02
HMGB3P22-202ENST00000451823 SLC34A2O95436 690 aa8.64□□□□□ -1.03
HMGB3P22-202ENST00000451823 NKX1-1Q15270 411 aaPredicted RBP8.63□□□□□ -1.03
HMGB3P22-202ENST00000451823 ANKRD13DQ6ZTN6 518 aa8.63□□□□□ -1.03
HMGB3P22-202ENST00000451823 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
HMGB3P22-202ENST00000451823 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
HMGB3P22-202ENST00000451823 PLPP6Q8IY26 295 aa8.6□□□□□ -1.03
HMGB3P22-202ENST00000451823 FOXK1P85037 733 aa8.59□□□□□ -1.03
HMGB3P22-202ENST00000451823 DNAJC5Q9H3Z4 198 aa8.58□□□□□ -1.04
HMGB3P22-202ENST00000451823 DSG2Q14126 1118 aa8.57□□□□□ -1.04
HMGB3P22-202ENST00000451823 PTCD2Q8WV60 388 aaKnown RBP8.57□□□□□ -1.04
HMGB3P22-202ENST00000451823 AXIN2Q9Y2T1 843 aa8.57□□□□□ -1.04
HMGB3P22-202ENST00000451823 DCAF8L2P0C7V8 631 aa8.56□□□□□ -1.04
HMGB3P22-202ENST00000451823 MYT1LQ9UL68 1186 aa8.55□□□□□ -1.04
HMGB3P22-202ENST00000451823 TBC1D12O60347 775 aa8.54□□□□□ -1.04
HMGB3P22-202ENST00000451823 POTEEQ6S8J3 1075 aa8.54□□□□□ -1.04
HMGB3P22-202ENST00000451823 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P22-202ENST00000451823 RYDENQ9NUL5 291 aaKnown RBP8.54□□□□□ -1.04
HMGB3P22-202ENST00000451823 KDM4FA0A1W2PPD8 638 aa8.53□□□□□ -1.04
HMGB3P22-202ENST00000451823 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.04
HMGB3P22-202ENST00000451823 GTPBP6O43824 516 aaPredicted RBP8.52□□□□□ -1.05
HMGB3P22-202ENST00000451823 PDE4AP27815 886 aa8.5□□□□□ -1.05
HMGB3P22-202ENST00000451823 ARHGAP33O14559 1287 aa8.49□□□□□ -1.05
HMGB3P22-202ENST00000451823 PBX2P40425 430 aa8.49□□□□□ -1.05
HMGB3P22-202ENST00000451823 PSDA5PKW4 1024 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P22-202ENST00000451823 PTGER2P43116 358 aa8.47□□□□□ -1.05
HMGB3P22-202ENST00000451823 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
HMGB3P22-202ENST00000451823 CRISPLD2Q9H0B8 497 aa8.47□□□□□ -1.05
HMGB3P22-202ENST00000451823 LARP6Q9BRS8 491 aaKnown RBP8.46□□□□□ -1.06
HMGB3P22-202ENST00000451823 NCKAP5LQ9HCH0 1330 aa8.46□□□□□ -1.06
HMGB3P22-202ENST00000451823 PSEN2P49810 448 aa8.45□□□□□ -1.06
HMGB3P22-202ENST00000451823 PPP1R15BQ5SWA1 713 aa8.45□□□□□ -1.06
HMGB3P22-202ENST00000451823 OXER1Q8TDS5 423 aa8.45□□□□□ -1.06
HMGB3P22-202ENST00000451823 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
HMGB3P22-202ENST00000451823 PPP4R3BQ5MIZ7 849 aa8.42□□□□□ -1.06
HMGB3P22-202ENST00000451823 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
HMGB3P22-202ENST00000451823 ZNF454Q8N9F8 522 aa8.39□□□□□ -1.07
HMGB3P22-202ENST00000451823 DDX27Q96GQ7 796 aaKnown RBP8.39□□□□□ -1.07
HMGB3P22-202ENST00000451823 MAP3K9P80192 1104 aa8.38□□□□□ -1.07
HMGB3P22-202ENST00000451823 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P22-202ENST00000451823 TK2O00142 265 aa8.37□□□□□ -1.07
HMGB3P22-202ENST00000451823 CADPS2Q86UW7 1296 aa8.37□□□□□ -1.07
HMGB3P22-202ENST00000451823 STAC3Q96MF2 364 aa8.37□□□□□ -1.07
HMGB3P22-202ENST00000451823 KCNK17Q96T54 332 aa8.37□□□□□ -1.07
HMGB3P22-202ENST00000451823 HRO43593 1189 aa8.36□□□□□ -1.07
HMGB3P22-202ENST00000451823 EVI5O60447 810 aa8.36□□□□□ -1.07
HMGB3P22-202ENST00000451823 KCNH8Q96L42 1107 aa8.34□□□□□ -1.07
HMGB3P22-202ENST00000451823 FOSBP53539 338 aa8.33□□□□□ -1.08
HMGB3P22-202ENST00000451823 MFSD10Q14728 455 aa8.33□□□□□ -1.08
HMGB3P22-202ENST00000451823 EMILIN3Q9NT22 766 aa8.33□□□□□ -1.08
HMGB3P22-202ENST00000451823 HCSTQ9UBK5 93 aa8.33□□□□□ -1.08
HMGB3P22-202ENST00000451823 VPS9D1Q9Y2B5 631 aa8.32□□□□□ -1.08
HMGB3P22-202ENST00000451823 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P22-202ENST00000451823 BCL2L12Q9HB09 334 aa8.31□□□□□ -1.08
HMGB3P22-202ENST00000451823 PTPREP23469 700 aa8.3□□□□□ -1.08
HMGB3P22-202ENST00000451823 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
HMGB3P22-202ENST00000451823 KCTD12Q96CX2 325 aaKnown RBP8.3□□□□□ -1.08
HMGB3P22-202ENST00000451823 ADAM33Q9BZ11 813 aa8.29□□□□□ -1.08
HMGB3P22-202ENST00000451823 JPH4Q96JJ6 628 aa8.27□□□□□ -1.09
HMGB3P22-202ENST00000451823 PLA2G2EQ9NZK7 142 aa8.26□□□□□ -1.09
HMGB3P22-202ENST00000451823 PCDHGA10Q9Y5H3 936 aa8.26□□□□□ -1.09
HMGB3P22-202ENST00000451823 BHMG1C9JSJ3 638 aaPredicted RBP8.25□□□□□ -1.09
HMGB3P22-202ENST00000451823 PTPN5P54829 565 aa8.25□□□□□ -1.09
HMGB3P22-202ENST00000451823 SPRYD3Q8NCJ5 442 aa8.25□□□□□ -1.09
HMGB3P22-202ENST00000451823 ZBED2Q9BTP6 218 aa8.25□□□□□ -1.09
HMGB3P22-202ENST00000451823 SLC4A5Q9BY07 1137 aa8.25□□□□□ -1.09
HMGB3P22-202ENST00000451823 GOLGA8CPA6NN73 597 aa8.22□□□□□ -1.09
HMGB3P22-202ENST00000451823 DPYSL4O14531 572 aa8.21□□□□□ -1.1
HMGB3P22-202ENST00000451823 CAMK2BQ13554 666 aa8.21□□□□□ -1.1
HMGB3P22-202ENST00000451823 MRPL50Q8N5N7 158 aaKnown RBP8.21□□□□□ -1.1
HMGB3P22-202ENST00000451823 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P22-202ENST00000451823 PHF14O94880 888 aa8.2□□□□□ -1.1
HMGB3P22-202ENST00000451823 AMER1Q5JTC6 1135 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P22-202ENST00000451823 TYW1BQ6NUM6 668 aa8.2□□□□□ -1.1
HMGB3P22-202ENST00000451823 CFAP44Q96MT7 982 aa8.2□□□□□ -1.1
HMGB3P22-202ENST00000451823 RTN4Q9NQC3 1192 aaKnown RBP8.2□□□□□ -1.1
HMGB3P22-202ENST00000451823 COL9A1P20849 921 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms