RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 MYO5CQ9NQX4 1742 aa10.06□□□□□ -0.8
USP46-202ENST00000451218 ARHGEF5Q12774 1597 aa10.06□□□□□ -0.8
USP46-202ENST00000451218 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
USP46-202ENST00000451218 DAPK1P53355 1430 aa10.06□□□□□ -0.8
USP46-202ENST00000451218 MBD5Q9P267 1494 aa10.05□□□□□ -0.8
USP46-202ENST00000451218 CARMIL2Q6F5E8 1435 aa10.05□□□□□ -0.8
USP46-202ENST00000451218 ZEB1P37275 1124 aaPredicted RBP10.04□□□□□ -0.8
USP46-202ENST00000451218 MAST1Q9Y2H9 1570 aa10.04□□□□□ -0.8
USP46-202ENST00000451218 ABCA9Q8IUA7 1624 aa10.03□□□□□ -0.8
USP46-202ENST00000451218 UACAQ9BZF9 1416 aa10.03□□□□□ -0.8
USP46-202ENST00000451218 ARHGEF12Q9NZN5 1544 aa10.02□□□□□ -0.81
USP46-202ENST00000451218 APLP2Q06481 763 aa10.02□□□□□ -0.81
USP46-202ENST00000451218 SHANK2Q9UPX8 1470 aa10.01□□□□□ -0.81
USP46-202ENST00000451218 CLSPNQ9HAW4 1339 aa10.01□□□□□ -0.81
USP46-202ENST00000451218 KDM5DQ9BY66 1539 aa10□□□□□ -0.81
USP46-202ENST00000451218 ROCK1Q13464 1354 aa10□□□□□ -0.81
USP46-202ENST00000451218 ZNF644Q9H582 1327 aaPredicted RBP10□□□□□ -0.81
USP46-202ENST00000451218 PLXNC1O60486 1568 aa9.99□□□□□ -0.81
USP46-202ENST00000451218 PZPP20742 1482 aa9.99□□□□□ -0.81
USP46-202ENST00000451218 CCER1Q8TC90 406 aaPredicted RBP9.98□□□□□ -0.81
USP46-202ENST00000451218 PTPRGP23470 1445 aa9.98□□□□□ -0.81
USP46-202ENST00000451218 UNC13BO14795 1591 aa9.97□□□□□ -0.81
USP46-202ENST00000451218 ABCC1P33527 1531 aa9.97□□□□□ -0.81
USP46-202ENST00000451218 ARAP3Q8WWN8 1544 aa9.97□□□□□ -0.81
USP46-202ENST00000451218 NCOA1Q15788 1441 aa9.96□□□□□ -0.82
USP46-202ENST00000451218 FBLN2P98095 1184 aa9.95□□□□□ -0.82
USP46-202ENST00000451218 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
USP46-202ENST00000451218 DEPDC5O75140 1603 aa9.95□□□□□ -0.82
USP46-202ENST00000451218 MAGI2Q86UL8 1455 aa9.95□□□□□ -0.82
USP46-202ENST00000451218 INO80Q9ULG1 1556 aaPredicted RBP9.94□□□□□ -0.82
USP46-202ENST00000451218 SLC4A1APQ9BWU0 796 aaKnown RBP9.93□□□□□ -0.82
USP46-202ENST00000451218 ARID3CA6NKF2 412 aa9.93□□□□□ -0.82
USP46-202ENST00000451218 TEX14Q8IWB6 1497 aa9.92□□□□□ -0.82
USP46-202ENST00000451218 MROH1Q8NDA8 1641 aa9.92□□□□□ -0.82
USP46-202ENST00000451218 PPRC1Q5VV67 1664 aaKnown RBP9.92□□□□□ -0.82
USP46-202ENST00000451218 IQGAP3Q86VI3 1631 aa9.91□□□□□ -0.82
USP46-202ENST00000451218 ZFYVE16Q7Z3T8 1539 aa9.9□□□□□ -0.82
USP46-202ENST00000451218 POLR1AO95602 1720 aaPredicted RBP9.9□□□□□ -0.82
USP46-202ENST00000451218 ATP1B4Q9UN42 357 aaPredicted RBP9.9□□□□□ -0.82
USP46-202ENST00000451218 FAM50AQ14320 339 aaKnown RBP9.9□□□□□ -0.82
USP46-202ENST00000451218 MAP3K4Q9Y6R4 1608 aa9.89□□□□□ -0.83
USP46-202ENST00000451218 BCORL1Q5H9F3 1711 aa9.89□□□□□ -0.83
USP46-202ENST00000451218 PPP6R1Q9UPN7 881 aa9.89□□□□□ -0.83
USP46-202ENST00000451218 KIDINS220Q9ULH0 1771 aa9.89□□□□□ -0.83
USP46-202ENST00000451218 RIMBP3CA6NJZ7 1639 aa9.88□□□□□ -0.83
USP46-202ENST00000451218 RIMBP3BA6NNM3 1639 aa9.88□□□□□ -0.83
USP46-202ENST00000451218 RIMBP3Q9UFD9 1639 aa9.88□□□□□ -0.83
USP46-202ENST00000451218 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
USP46-202ENST00000451218 WDR7Q9Y4E6 1490 aa9.88□□□□□ -0.83
USP46-202ENST00000451218 PLCH2O75038 1416 aa9.87□□□□□ -0.83
USP46-202ENST00000451218 ITGAEP38570 1179 aa9.87□□□□□ -0.83
USP46-202ENST00000451218 PIAS4Q8N2W9 510 aaPredicted RBP9.87□□□□□ -0.83
USP46-202ENST00000451218 C9orf84Q5VXU9 1444 aa9.87□□□□□ -0.83
USP46-202ENST00000451218 KIAA1107Q9UPP5 1409 aa9.87□□□□□ -0.83
USP46-202ENST00000451218 CCDC141Q6ZP82 1450 aa9.87□□□□□ -0.83
USP46-202ENST00000451218 KDM5CP41229 1560 aa9.86□□□□□ -0.83
USP46-202ENST00000451218 ANKRD30BQ9BXX2 1392 aa9.85□□□□□ -0.83
USP46-202ENST00000451218 FRMPD1Q5SYB0 1578 aa9.85□□□□□ -0.83
USP46-202ENST00000451218 FOXD1Q16676 465 aa9.85□□□□□ -0.83
USP46-202ENST00000451218 SIGLEC1Q9BZZ2 1709 aa9.85□□□□□ -0.83
USP46-202ENST00000451218 RICTORQ6R327 1708 aa9.85□□□□□ -0.83
USP46-202ENST00000451218 RPRD2Q5VT52 1461 aaKnown RBP9.84□□□□□ -0.83
USP46-202ENST00000451218 E9PCH4 1651 aa9.84□□□□□ -0.83
USP46-202ENST00000451218 SIN3AQ96ST3 1273 aa9.84□□□□□ -0.83
USP46-202ENST00000451218 ARHGAP5Q13017 1502 aa9.84□□□□□ -0.83
USP46-202ENST00000451218 PLA2R1Q13018 1463 aa9.82□□□□□ -0.84
USP46-202ENST00000451218 TRAPPC8Q9Y2L5 1435 aa9.82□□□□□ -0.84
USP46-202ENST00000451218 EIF2AK4Q9P2K8 1649 aaKnown RBP9.82□□□□□ -0.84
USP46-202ENST00000451218 KIF13AQ9H1H9 1805 aa9.82□□□□□ -0.84
USP46-202ENST00000451218 FAM135AQ9P2D6 1515 aa9.82□□□□□ -0.84
USP46-202ENST00000451218 ASXL2Q76L83 1435 aa9.81□□□□□ -0.84
USP46-202ENST00000451218 RNF17Q9BXT8 1623 aaKnown RBP9.81□□□□□ -0.84
USP46-202ENST00000451218 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
USP46-202ENST00000451218 IFT172Q9UG01 1749 aa9.8□□□□□ -0.84
USP46-202ENST00000451218 ABCA6Q8N139 1617 aa9.8□□□□□ -0.84
USP46-202ENST00000451218 GLI2P10070 1586 aa9.79□□□□□ -0.84
USP46-202ENST00000451218 PRDM15P57071 1507 aaPredicted RBP9.79□□□□□ -0.84
USP46-202ENST00000451218 CEP152O94986 1710 aa9.79□□□□□ -0.84
USP46-202ENST00000451218 CHIC2Q9UKJ5 165 aa9.79□□□□□ -0.84
USP46-202ENST00000451218 ANKRD50Q9ULJ7 1429 aa9.78□□□□□ -0.84
USP46-202ENST00000451218 DUOX2Q9NRD8 1548 aa9.78□□□□□ -0.84
USP46-202ENST00000451218 DIP2BQ9P265 1576 aa9.78□□□□□ -0.84
USP46-202ENST00000451218 CFDP1Q9UEE9 299 aaPredicted RBP9.78□□□□□ -0.84
USP46-202ENST00000451218 SPHKAPQ2M3C7 1700 aa9.77□□□□□ -0.84
USP46-202ENST00000451218 NCBP3Q53F19 620 aaKnown RBP9.77□□□□□ -0.84
USP46-202ENST00000451218 SPATA31E1Q6ZUB1 1445 aa9.77□□□□□ -0.85
USP46-202ENST00000451218 TRPM1Q7Z4N2 1603 aa9.77□□□□□ -0.85
USP46-202ENST00000451218 ATP7AQ04656 1500 aa9.77□□□□□ -0.85
USP46-202ENST00000451218 ATP10AO60312 1499 aa9.77□□□□□ -0.85
USP46-202ENST00000451218 CFAP74Q9C0B2 1584 aa9.77□□□□□ -0.85
USP46-202ENST00000451218 PLEKHD1A6NEE1 506 aa9.76□□□□□ -0.85
USP46-202ENST00000451218 ZNF316A6NFI3 1004 aaPredicted RBP9.76□□□□□ -0.85
USP46-202ENST00000451218 CDK11AQ9UQ88 783 aaPredicted RBP9.76□□□□□ -0.85
USP46-202ENST00000451218 PLEKHH2Q8IVE3 1493 aa9.76□□□□□ -0.85
USP46-202ENST00000451218 ERBINQ96RT1 1412 aa9.76□□□□□ -0.85
USP46-202ENST00000451218 MROH2AA6NES4 1674 aa9.75□□□□□ -0.85
USP46-202ENST00000451218 TET3O43151 1660 aa9.75□□□□□ -0.85
USP46-202ENST00000451218 MPHOSPH9Q99550 1183 aa9.75□□□□□ -0.85
USP46-202ENST00000451218 RTEL1-TNFRSF6BF6WH68 1400 aa9.75□□□□□ -0.85
USP46-202ENST00000451218 PPP1R15AO75807 674 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms