RNA–Protein interactions for RNA: ENST00000451091.2

PABPC4-207, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-207ENST00000451091 EFCAB2Q5VUJ9 269 aa36.51■■■■□ 3.44
PABPC4-207ENST00000451091 GPATCH8Q9UKJ3 1502 aaKnown RBP36.49■■■■□ 3.43
PABPC4-207ENST00000451091 CCNB3Q8WWL7 1395 aa36.48■■■■□ 3.43
PABPC4-207ENST00000451091 AKNAQ7Z591 1439 aa36.48■■■■□ 3.43
PABPC4-207ENST00000451091 NCOA2Q15596 1464 aa36.47■■■■□ 3.43
PABPC4-207ENST00000451091 COL17A1Q9UMD9 1497 aaPredicted RBP36.47■■■■□ 3.43
PABPC4-207ENST00000451091 ARHGAP5Q13017 1502 aa36.46■■■■□ 3.43
PABPC4-207ENST00000451091 ITSN2Q9NZM3 1697 aa36.41■■■■□ 3.42
PABPC4-207ENST00000451091 CFDP1Q9UEE9 299 aaPredicted RBP36.35■■■■□ 3.41
PABPC4-207ENST00000451091 ADGRL1O94910 1474 aa36.35■■■■□ 3.41
PABPC4-207ENST00000451091 DENND4BO75064 1496 aaPredicted RBP36.32■■■■□ 3.41
PABPC4-207ENST00000451091 SCAPERQ9BY12 1400 aa36.3■■■■□ 3.4
PABPC4-207ENST00000451091 RICTORQ6R327 1708 aa36.28■■■■□ 3.4
PABPC4-207ENST00000451091 PLEKHH2Q8IVE3 1493 aa36.26■■■■□ 3.4
PABPC4-207ENST00000451091 ABCC1P33527 1531 aa36.26■■■■□ 3.4
PABPC4-207ENST00000451091 SAMD9LQ8IVG5 1584 aa36.26■■■■□ 3.39
PABPC4-207ENST00000451091 KIAA1107Q9UPP5 1409 aa36.25■■■■□ 3.39
PABPC4-207ENST00000451091 FRMPD1Q5SYB0 1578 aa36.24■■■■□ 3.39
PABPC4-207ENST00000451091 RAPGEF3O95398 923 aa36.24■■■■□ 3.39
PABPC4-207ENST00000451091 MYOM3Q5VTT5 1437 aa36.24■■■■□ 3.39
PABPC4-207ENST00000451091 MIA2Q96PC5 1412 aa36.23■■■■□ 3.39
PABPC4-207ENST00000451091 POGZQ7Z3K3 1410 aa36.22■■■■□ 3.39
PABPC4-207ENST00000451091 ZNF777Q9ULD5 760 aaPredicted RBP36.2■■■■□ 3.39
PABPC4-207ENST00000451091 ZNF518AQ6AHZ1 1483 aa36.18■■■■□ 3.38
PABPC4-207ENST00000451091 ZMYM4Q5VZL5 1548 aa36.18■■■■□ 3.38
PABPC4-207ENST00000451091 ARHGEF12Q9NZN5 1544 aa36.18■■■■□ 3.38
PABPC4-207ENST00000451091 MAGI2Q86UL8 1455 aa36.13■■■■□ 3.37
PABPC4-207ENST00000451091 KDM5CP41229 1560 aa36.13■■■■□ 3.37
PABPC4-207ENST00000451091 SYCP2Q9BX26 1530 aa36.12■■■■□ 3.37
PABPC4-207ENST00000451091 ZNF644Q9H582 1327 aaPredicted RBP36.11■■■■□ 3.37
PABPC4-207ENST00000451091 CAMSAP2Q08AD1 1489 aa36.1■■■■□ 3.37
PABPC4-207ENST00000451091 TRAPPC8Q9Y2L5 1435 aa36.09■■■■□ 3.37
PABPC4-207ENST00000451091 MBD5Q9P267 1494 aa36.08■■■■□ 3.37
PABPC4-207ENST00000451091 HNRNPMP52272 730 aaKnown RBP eCLIP36.08■■■■□ 3.372e-6■■■■□ 26
PABPC4-207ENST00000451091 RSPH4AQ5TD94 716 aa36.08■■■■□ 3.37
PABPC4-207ENST00000451091 AFAP1Q8N556 730 aa36.08■■■■□ 3.37
PABPC4-207ENST00000451091 FGD6Q6ZV73 1430 aa36.05■■■■□ 3.36
PABPC4-207ENST00000451091 MLH3Q9UHC1 1453 aa36.04■■■■□ 3.36
PABPC4-207ENST00000451091 ARHGEF5Q12774 1597 aa36.01■■■■□ 3.35
PABPC4-207ENST00000451091 PTPN23Q9H3S7 1636 aa36.01■■■■□ 3.35
PABPC4-207ENST00000451091 TCOF1Q13428 1488 aaKnown RBP35.99■■■■□ 3.35
PABPC4-207ENST00000451091 HECW2Q9P2P5 1572 aa35.99■■■■□ 3.35
PABPC4-207ENST00000451091 ZFYVE16Q7Z3T8 1539 aa35.98■■■■□ 3.35
PABPC4-207ENST00000451091 ARHGEF40Q8TER5 1519 aa35.98■■■■□ 3.35
PABPC4-207ENST00000451091 PPARGC1BQ86YN6 1023 aaKnown RBP35.96■■■■□ 3.35
PABPC4-207ENST00000451091 CCDC141Q6ZP82 1450 aa35.95■■■■□ 3.35
PABPC4-207ENST00000451091 SPAG9O60271 1321 aaKnown RBP35.92■■■■□ 3.34
PABPC4-207ENST00000451091 KIDINS220Q9ULH0 1771 aa35.92■■■■□ 3.34
PABPC4-207ENST00000451091 YEATS2Q9ULM3 1422 aa35.91■■■■□ 3.34
PABPC4-207ENST00000451091 RTEL1-TNFRSF6BF6WH68 1400 aa35.9■■■■□ 3.34
PABPC4-207ENST00000451091 INO80Q9ULG1 1556 aaPredicted RBP35.89■■■■□ 3.34
PABPC4-207ENST00000451091 ATP10AO60312 1499 aa35.87■■■■□ 3.33
PABPC4-207ENST00000451091 ATP7AQ04656 1500 aa35.86■■■■□ 3.33
PABPC4-207ENST00000451091 TSPY4P0CV99 314 aa35.84■■■■□ 3.33
PABPC4-207ENST00000451091 TSPY10P0CW01 314 aa35.84■■■■□ 3.33
PABPC4-207ENST00000451091 DIP2CQ9Y2E4 1556 aa35.84■■■■□ 3.33
PABPC4-207ENST00000451091 MYT1LQ9UL68 1186 aa35.83■■■■□ 3.33
PABPC4-207ENST00000451091 REREQ9P2R6 1566 aa35.82■■■■□ 3.32
PABPC4-207ENST00000451091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.82■■■■□ 3.32
PABPC4-207ENST00000451091 ABCA6Q8N139 1617 aa35.82■■■■□ 3.32
PABPC4-207ENST00000451091 MAST1Q9Y2H9 1570 aa35.81■■■■□ 3.32
PABPC4-207ENST00000451091 DNMT1P26358 1616 aaKnown RBP35.81■■■■□ 3.32
PABPC4-207ENST00000451091 C9orf84Q5VXU9 1444 aa35.81■■■■□ 3.32
PABPC4-207ENST00000451091 ABCC5O15440 1437 aa35.77■■■■□ 3.32
PABPC4-207ENST00000451091 RRBP1Q9P2E9 1410 aaKnown RBP35.76■■■■□ 3.32
PABPC4-207ENST00000451091 CROCC2H7BZ55 1655 aa35.76■■■■□ 3.32
PABPC4-207ENST00000451091 SHANK2Q9UPX8 1470 aa35.76■■■■□ 3.32
PABPC4-207ENST00000451091 DAPK1P53355 1430 aa35.75■■■■□ 3.31
PABPC4-207ENST00000451091 FAM50AQ14320 339 aaKnown RBP35.74■■■■□ 3.31
PABPC4-207ENST00000451091 ADGBQ8N7X0 1667 aa35.72■■■■□ 3.31
PABPC4-207ENST00000451091 AGLP35573 1532 aa35.69■■■■□ 3.3
PABPC4-207ENST00000451091 SIGLEC1Q9BZZ2 1709 aa35.69■■■■□ 3.3
PABPC4-207ENST00000451091 PLXNC1O60486 1568 aa35.66■■■■□ 3.3
PABPC4-207ENST00000451091 A2MP01023 1474 aa35.66■■■■□ 3.3
PABPC4-207ENST00000451091 ARID4BQ4LE39 1312 aaPredicted RBP35.63■■■■□ 3.29
PABPC4-207ENST00000451091 BCORL1Q5H9F3 1711 aa35.63■■■■□ 3.29
PABPC4-207ENST00000451091 DHX29Q7Z478 1369 aaKnown RBP35.62■■■■□ 3.29
PABPC4-207ENST00000451091 ADGRL2O95490 1459 aa35.58■■■■□ 3.29
PABPC4-207ENST00000451091 KDM4FA0A1W2PPD8 638 aa35.57■■■■□ 3.28
PABPC4-207ENST00000451091 ANKRD30AQ9BXX3 1397 aa35.56■■■■□ 3.28
PABPC4-207ENST00000451091 ADAMTSL3P82987 1691 aa35.56■■■■□ 3.28
PABPC4-207ENST00000451091 NCOA1Q15788 1441 aa35.54■■■■□ 3.28
PABPC4-207ENST00000451091 DUOX2Q9NRD8 1548 aa35.52■■■■□ 3.28
PABPC4-207ENST00000451091 PTPRKQ15262 1439 aa35.51■■■■□ 3.28
PABPC4-207ENST00000451091 CHIC2Q9UKJ5 165 aa35.5■■■■□ 3.27
PABPC4-207ENST00000451091 ROCK1Q13464 1354 aa35.5■■■■□ 3.27
PABPC4-207ENST00000451091 KIF15Q9NS87 1388 aa35.49■■■■□ 3.27
PABPC4-207ENST00000451091 RRP7BPQ9NSQ0 103 aa35.46■■■■□ 3.27
PABPC4-207ENST00000451091 EIF2AK4Q9P2K8 1649 aaKnown RBP35.45■■■■□ 3.27
PABPC4-207ENST00000451091 ERBINQ96RT1 1412 aa35.43■■■■□ 3.26
PABPC4-207ENST00000451091 PPP6R1Q9UPN7 881 aa35.43■■■■□ 3.26
PABPC4-207ENST00000451091 MLECQ14165 292 aa35.41■■■■□ 3.26
PABPC4-207ENST00000451091 MADDQ8WXG6 1647 aa35.39■■■■□ 3.26
PABPC4-207ENST00000451091 KIF3BO15066 747 aa35.39■■■■□ 3.26
PABPC4-207ENST00000451091 ITGAEP38570 1179 aa35.38■■■■□ 3.25
PABPC4-207ENST00000451091 FER1L4A9Z1Z3 1794 aa35.37■■■■□ 3.25
PABPC4-207ENST00000451091 RNF17Q9BXT8 1623 aaKnown RBP35.34■■■■□ 3.25
PABPC4-207ENST00000451091 FAM135AQ9P2D6 1515 aa35.32■■■■□ 3.25
PABPC4-207ENST00000451091 GGT6Q6P531 493 aa35.32■■■■□ 3.24
PABPC4-207ENST00000451091 CNTLNQ9NXG0 1405 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms