RNA–Protein interactions for RNA: ENST00000450882.1

MRPL28-206, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-206ENST00000450882 SUPT6HQ7KZ85 1726 aaKnown RBP25.49■■□□□ 1.67
MRPL28-206ENST00000450882 PREX2Q70Z35 1606 aa25.49■■□□□ 1.67
MRPL28-206ENST00000450882 KANK4Q5T7N3 995 aaPredicted RBP25.47■■□□□ 1.67
MRPL28-206ENST00000450882 CDC42BPAQ5VT25 1732 aa25.46■■□□□ 1.67
MRPL28-206ENST00000450882 ADGRL1O94910 1474 aa25.46■■□□□ 1.67
MRPL28-206ENST00000450882 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
MRPL28-206ENST00000450882 GPATCH8Q9UKJ3 1502 aaKnown RBP25.45■■□□□ 1.66
MRPL28-206ENST00000450882 NCOA2Q15596 1464 aa25.44■■□□□ 1.66
MRPL28-206ENST00000450882 DENND4BO75064 1496 aaPredicted RBP25.43■■□□□ 1.66
MRPL28-206ENST00000450882 RAPGEF3O95398 923 aa25.43■■□□□ 1.66
MRPL28-206ENST00000450882 CFDP1Q9UEE9 299 aaPredicted RBP25.42■■□□□ 1.66
MRPL28-206ENST00000450882 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
MRPL28-206ENST00000450882 SCAPERQ9BY12 1400 aa25.41■■□□□ 1.66
MRPL28-206ENST00000450882 ITSN2Q9NZM3 1697 aa25.4■■□□□ 1.66
MRPL28-206ENST00000450882 POGZQ7Z3K3 1410 aa25.34■■□□□ 1.65
MRPL28-206ENST00000450882 FRMPD1Q5SYB0 1578 aa25.34■■□□□ 1.65
MRPL28-206ENST00000450882 RICTORQ6R327 1708 aa25.33■■□□□ 1.65
MRPL28-206ENST00000450882 ABCC1P33527 1531 aa25.32■■□□□ 1.64
MRPL28-206ENST00000450882 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
MRPL28-206ENST00000450882 PLEKHH2Q8IVE3 1493 aa25.3■■□□□ 1.64
MRPL28-206ENST00000450882 ZNF518AQ6AHZ1 1483 aa25.29■■□□□ 1.64
MRPL28-206ENST00000450882 SYCP2Q9BX26 1530 aa25.27■■□□□ 1.64
MRPL28-206ENST00000450882 MYT1LQ9UL68 1186 aa25.26■■□□□ 1.63
MRPL28-206ENST00000450882 MYOM3Q5VTT5 1437 aa25.26■■□□□ 1.63
MRPL28-206ENST00000450882 ZMYM4Q5VZL5 1548 aa25.26■■□□□ 1.63
MRPL28-206ENST00000450882 ARHGEF12Q9NZN5 1544 aa25.26■■□□□ 1.63
MRPL28-206ENST00000450882 HNRNPMP52272 730 aaKnown RBP eCLIP25.25■■□□□ 1.63
MRPL28-206ENST00000450882 AFAP1Q8N556 730 aa25.25■■□□□ 1.63
MRPL28-206ENST00000450882 ZNF644Q9H582 1327 aaPredicted RBP25.25■■□□□ 1.63
MRPL28-206ENST00000450882 KIAA1107Q9UPP5 1409 aa25.24■■□□□ 1.63
MRPL28-206ENST00000450882 TRAPPC8Q9Y2L5 1435 aa25.24■■□□□ 1.63
MRPL28-206ENST00000450882 CAMSAP2Q08AD1 1489 aa25.22■■□□□ 1.63
MRPL28-206ENST00000450882 ZFYVE16Q7Z3T8 1539 aa25.22■■□□□ 1.63
MRPL28-206ENST00000450882 MAGI2Q86UL8 1455 aa25.21■■□□□ 1.63
MRPL28-206ENST00000450882 KDM5CP41229 1560 aa25.2■■□□□ 1.62
MRPL28-206ENST00000450882 PPARGC1BQ86YN6 1023 aaKnown RBP25.2■■□□□ 1.62
MRPL28-206ENST00000450882 ARHGEF40Q8TER5 1519 aa25.2■■□□□ 1.62
MRPL28-206ENST00000450882 MIA2Q96PC5 1412 aa25.2■■□□□ 1.62
MRPL28-206ENST00000450882 YEATS2Q9ULM3 1422 aa25.17■■□□□ 1.62
MRPL28-206ENST00000450882 HECW2Q9P2P5 1572 aa25.17■■□□□ 1.62
MRPL28-206ENST00000450882 SPAG9O60271 1321 aaKnown RBP25.15■■□□□ 1.62
MRPL28-206ENST00000450882 MLH3Q9UHC1 1453 aa25.14■■□□□ 1.61
MRPL28-206ENST00000450882 MBD5Q9P267 1494 aa25.13■■□□□ 1.61
MRPL28-206ENST00000450882 ARID4BQ4LE39 1312 aaPredicted RBP25.12■■□□□ 1.61
MRPL28-206ENST00000450882 FGD6Q6ZV73 1430 aa25.12■■□□□ 1.61
MRPL28-206ENST00000450882 CCDC141Q6ZP82 1450 aa25.11■■□□□ 1.61
MRPL28-206ENST00000450882 RSPH4AQ5TD94 716 aa25.11■■□□□ 1.61
MRPL28-206ENST00000450882 PTPN23Q9H3S7 1636 aa25.1■■□□□ 1.61
MRPL28-206ENST00000450882 ATP10AO60312 1499 aa25.09■■□□□ 1.61
MRPL28-206ENST00000450882 ARHGEF5Q12774 1597 aa25.07■■□□□ 1.6
MRPL28-206ENST00000450882 ATP7AQ04656 1500 aa25.07■■□□□ 1.6
MRPL28-206ENST00000450882 DIP2CQ9Y2E4 1556 aa25.06■■□□□ 1.6
MRPL28-206ENST00000450882 KIDINS220Q9ULH0 1771 aa25.06■■□□□ 1.6
MRPL28-206ENST00000450882 C9orf84Q5VXU9 1444 aa25.06■■□□□ 1.6
MRPL28-206ENST00000450882 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
MRPL28-206ENST00000450882 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
MRPL28-206ENST00000450882 ABCA6Q8N139 1617 aa25.05■■□□□ 1.6
MRPL28-206ENST00000450882 INO80Q9ULG1 1556 aaPredicted RBP25.04■■□□□ 1.6
MRPL28-206ENST00000450882 TCOF1Q13428 1488 aaKnown RBP25.03■■□□□ 1.6
MRPL28-206ENST00000450882 FAM50AQ14320 339 aaKnown RBP25.03■■□□□ 1.6
MRPL28-206ENST00000450882 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
MRPL28-206ENST00000450882 KDM4FA0A1W2PPD8 638 aa24.98■■□□□ 1.59
MRPL28-206ENST00000450882 REREQ9P2R6 1566 aa24.97■■□□□ 1.59
MRPL28-206ENST00000450882 MLECQ14165 292 aa24.95■■□□□ 1.58
MRPL28-206ENST00000450882 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
MRPL28-206ENST00000450882 SIGLEC1Q9BZZ2 1709 aa24.95■■□□□ 1.58
MRPL28-206ENST00000450882 ABCC5O15440 1437 aa24.94■■□□□ 1.58
MRPL28-206ENST00000450882 DAPK1P53355 1430 aa24.94■■□□□ 1.58
MRPL28-206ENST00000450882 DNMT1P26358 1616 aaKnown RBP24.94■■□□□ 1.58
MRPL28-206ENST00000450882 BCORL1Q5H9F3 1711 aa24.93■■□□□ 1.58
MRPL28-206ENST00000450882 A2MP01023 1474 aa24.93■■□□□ 1.58
MRPL28-206ENST00000450882 ADGBQ8N7X0 1667 aa24.93■■□□□ 1.58
MRPL28-206ENST00000450882 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
MRPL28-206ENST00000450882 CROCC2H7BZ55 1655 aa24.91■■□□□ 1.58
MRPL28-206ENST00000450882 SHANK2Q9UPX8 1470 aa24.91■■□□□ 1.58
MRPL28-206ENST00000450882 AGLP35573 1532 aa24.89■■□□□ 1.57
MRPL28-206ENST00000450882 CHIC2Q9UKJ5 165 aa24.87■■□□□ 1.57
MRPL28-206ENST00000450882 ADAMTSL3P82987 1691 aa24.87■■□□□ 1.57
MRPL28-206ENST00000450882 DHX29Q7Z478 1369 aaKnown RBP24.86■■□□□ 1.57
MRPL28-206ENST00000450882 PLXNC1O60486 1568 aa24.85■■□□□ 1.57
MRPL28-206ENST00000450882 MADDQ8WXG6 1647 aa24.84■■□□□ 1.57
MRPL28-206ENST00000450882 ITGAEP38570 1179 aa24.83■■□□□ 1.57
MRPL28-206ENST00000450882 ANKRD30AQ9BXX3 1397 aa24.82■■□□□ 1.56
MRPL28-206ENST00000450882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.82■■□□□ 1.56
MRPL28-206ENST00000450882 ESF1Q9H501 851 aaKnown RBP24.82■■□□□ 1.56
MRPL28-206ENST00000450882 RRBP1Q9P2E9 1410 aaKnown RBP24.82■■□□□ 1.56
MRPL28-206ENST00000450882 KIF15Q9NS87 1388 aa24.81■■□□□ 1.56
MRPL28-206ENST00000450882 RRP7BPQ9NSQ0 103 aa24.81■■□□□ 1.56
MRPL28-206ENST00000450882 FER1L4A9Z1Z3 1794 aa24.8■■□□□ 1.56
MRPL28-206ENST00000450882 RIMS1Q86UR5 1692 aaKnown RBP24.79■■□□□ 1.56
MRPL28-206ENST00000450882 DUOX2Q9NRD8 1548 aa24.78■■□□□ 1.56
MRPL28-206ENST00000450882 KIF3BO15066 747 aa24.78■■□□□ 1.56
MRPL28-206ENST00000450882 GGT6Q6P531 493 aa24.78■■□□□ 1.56
MRPL28-206ENST00000450882 ADGRL2O95490 1459 aa24.75■■□□□ 1.55
MRPL28-206ENST00000450882 PTPRMP28827 1452 aa24.75■■□□□ 1.55
MRPL28-206ENST00000450882 PLPPR3Q6T4P5 718 aa24.74■■□□□ 1.55
MRPL28-206ENST00000450882 NCOA1Q15788 1441 aa24.74■■□□□ 1.55
MRPL28-206ENST00000450882 PTPRKQ15262 1439 aa24.73■■□□□ 1.55
MRPL28-206ENST00000450882 ERBINQ96RT1 1412 aa24.7■■□□□ 1.55
MRPL28-206ENST00000450882 EIF2AK4Q9P2K8 1649 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms