RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 HECW2Q9P2P5 1572 aa8.79□□□□□ -1
TM9SF4-205ENST00000450829 CCNB3Q8WWL7 1395 aa8.79□□□□□ -1
TM9SF4-205ENST00000450829 PTPN23Q9H3S7 1636 aa8.79□□□□□ -1
TM9SF4-205ENST00000450829 NCOA2Q15596 1464 aa8.78□□□□□ -1
TM9SF4-205ENST00000450829 ARID3CA6NKF2 412 aa8.78□□□□□ -1
TM9SF4-205ENST00000450829 RICTORQ6R327 1708 aa8.77□□□□□ -1
TM9SF4-205ENST00000450829 MTUS2Q5JR59 1369 aa8.77□□□□□ -1.01
TM9SF4-205ENST00000450829 KCNH8Q96L42 1107 aa8.77□□□□□ -1.01
TM9SF4-205ENST00000450829 GCC2Q8IWJ2 1684 aa8.77□□□□□ -1.01
TM9SF4-205ENST00000450829 TTC37Q6PGP7 1564 aa8.77□□□□□ -1.01
TM9SF4-205ENST00000450829 CDC42BPAQ5VT25 1732 aa8.77□□□□□ -1.01
TM9SF4-205ENST00000450829 ARHGEF40Q8TER5 1519 aa8.76□□□□□ -1.01
TM9SF4-205ENST00000450829 CROCC2H7BZ55 1655 aa8.76□□□□□ -1.01
TM9SF4-205ENST00000450829 ADAMTSL3P82987 1691 aa8.76□□□□□ -1.01
TM9SF4-205ENST00000450829 MYOM3Q5VTT5 1437 aa8.76□□□□□ -1.01
TM9SF4-205ENST00000450829 FGD6Q6ZV73 1430 aa8.76□□□□□ -1.01
TM9SF4-205ENST00000450829 NEO1Q92859 1461 aa8.76□□□□□ -1.01
TM9SF4-205ENST00000450829 KIF14Q15058 1648 aa8.76□□□□□ -1.01
TM9SF4-205ENST00000450829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.75□□□□□ -1.01
TM9SF4-205ENST00000450829 BCORL1Q5H9F3 1711 aa8.74□□□□□ -1.01
TM9SF4-205ENST00000450829 CFAP74Q9C0B2 1584 aa8.74□□□□□ -1.01
TM9SF4-205ENST00000450829 ATP1B4Q9UN42 357 aaPredicted RBP8.74□□□□□ -1.01
TM9SF4-205ENST00000450829 TCOF1Q13428 1488 aaKnown RBP8.74□□□□□ -1.01
TM9SF4-205ENST00000450829 SIGLEC1Q9BZZ2 1709 aa8.74□□□□□ -1.01
TM9SF4-205ENST00000450829 ADGBQ8N7X0 1667 aa8.73□□□□□ -1.01
TM9SF4-205ENST00000450829 ZEB1P37275 1124 aaPredicted RBP8.73□□□□□ -1.01
TM9SF4-205ENST00000450829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.73□□□□□ -1.01
TM9SF4-205ENST00000450829 ZMYM4Q5VZL5 1548 aa8.72□□□□□ -1.01
TM9SF4-205ENST00000450829 DNMT1P26358 1616 aaKnown RBP8.72□□□□□ -1.01
TM9SF4-205ENST00000450829 MADDQ8WXG6 1647 aa8.72□□□□□ -1.01
TM9SF4-205ENST00000450829 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.01
TM9SF4-205ENST00000450829 HNRNPUL2Q1KMD3 747 aaKnown RBP8.71□□□□□ -1.02
TM9SF4-205ENST00000450829 PREX2Q70Z35 1606 aa8.71□□□□□ -1.02
TM9SF4-205ENST00000450829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
TM9SF4-205ENST00000450829 MYO5CQ9NQX4 1742 aa8.7□□□□□ -1.02
TM9SF4-205ENST00000450829 CDC42BPBQ9Y5S2 1711 aa8.7□□□□□ -1.02
TM9SF4-205ENST00000450829 RIMS1Q86UR5 1692 aaKnown RBP8.69□□□□□ -1.02
TM9SF4-205ENST00000450829 MIA2Q96PC5 1412 aa8.69□□□□□ -1.02
TM9SF4-205ENST00000450829 FANCAO15360 1455 aa8.69□□□□□ -1.02
TM9SF4-205ENST00000450829 RAPGEF3O95398 923 aa8.68□□□□□ -1.02
TM9SF4-205ENST00000450829 PTPRMP28827 1452 aa8.68□□□□□ -1.02
TM9SF4-205ENST00000450829 DENND4BO75064 1496 aaPredicted RBP8.67□□□□□ -1.02
TM9SF4-205ENST00000450829 CCER1Q8TC90 406 aaPredicted RBP8.67□□□□□ -1.02
TM9SF4-205ENST00000450829 ZFYVE16Q7Z3T8 1539 aa8.66□□□□□ -1.02
TM9SF4-205ENST00000450829 AKNAQ7Z591 1439 aa8.66□□□□□ -1.02
TM9SF4-205ENST00000450829 FER1L4A9Z1Z3 1794 aa8.66□□□□□ -1.02
TM9SF4-205ENST00000450829 POGZQ7Z3K3 1410 aa8.65□□□□□ -1.02
TM9SF4-205ENST00000450829 CAMSAP2Q08AD1 1489 aa8.64□□□□□ -1.03
TM9SF4-205ENST00000450829 SETD5Q9C0A6 1442 aa8.64□□□□□ -1.03
TM9SF4-205ENST00000450829 YEATS2Q9ULM3 1422 aa8.64□□□□□ -1.03
TM9SF4-205ENST00000450829 DHX57Q6P158 1386 aaKnown RBP8.64□□□□□ -1.03
TM9SF4-205ENST00000450829 RAB3GAP2Q9H2M9 1393 aa8.64□□□□□ -1.03
TM9SF4-205ENST00000450829 HFM1A2PYH4 1435 aa8.63□□□□□ -1.03
TM9SF4-205ENST00000450829 PTPRKQ15262 1439 aa8.63□□□□□ -1.03
TM9SF4-205ENST00000450829 FAM50AQ14320 339 aaKnown RBP8.63□□□□□ -1.03
TM9SF4-205ENST00000450829 CDK11AQ9UQ88 783 aaPredicted RBP8.63□□□□□ -1.03
TM9SF4-205ENST00000450829 GPATCH8Q9UKJ3 1502 aaKnown RBP8.63□□□□□ -1.03
TM9SF4-205ENST00000450829 LMTK3Q96Q04 1460 aa8.63□□□□□ -1.03
TM9SF4-205ENST00000450829 PLCH2O75038 1416 aa8.63□□□□□ -1.03
TM9SF4-205ENST00000450829 KDM5CP41229 1560 aa8.62□□□□□ -1.03
TM9SF4-205ENST00000450829 ARHGEF5Q12774 1597 aa8.62□□□□□ -1.03
TM9SF4-205ENST00000450829 SAMD9LQ8IVG5 1584 aa8.62□□□□□ -1.03
TM9SF4-205ENST00000450829 PLEKHD1A6NEE1 506 aa8.62□□□□□ -1.03
TM9SF4-205ENST00000450829 MAGI2Q86UL8 1455 aa8.62□□□□□ -1.03
TM9SF4-205ENST00000450829 ILDR1Q86SU0 546 aaPredicted RBP8.61□□□□□ -1.03
TM9SF4-205ENST00000450829 DAPK1P53355 1430 aa8.61□□□□□ -1.03
TM9SF4-205ENST00000450829 ABCA6Q8N139 1617 aa8.61□□□□□ -1.03
TM9SF4-205ENST00000450829 DIP2CQ9Y2E4 1556 aa8.61□□□□□ -1.03
TM9SF4-205ENST00000450829 ARHGEF12Q9NZN5 1544 aa8.6□□□□□ -1.03
TM9SF4-205ENST00000450829 CLSPNQ9HAW4 1339 aa8.6□□□□□ -1.03
TM9SF4-205ENST00000450829 ITGAEP38570 1179 aa8.6□□□□□ -1.03
TM9SF4-205ENST00000450829 NAIPQ13075 1403 aa8.6□□□□□ -1.03
TM9SF4-205ENST00000450829 SCAPERQ9BY12 1400 aa8.6□□□□□ -1.03
TM9SF4-205ENST00000450829 ABCC1P33527 1531 aa8.59□□□□□ -1.03
TM9SF4-205ENST00000450829 SHANK2Q9UPX8 1470 aa8.59□□□□□ -1.03
TM9SF4-205ENST00000450829 ARHGAP5Q13017 1502 aa8.59□□□□□ -1.03
TM9SF4-205ENST00000450829 ADGRL2O95490 1459 aa8.58□□□□□ -1.04
TM9SF4-205ENST00000450829 REREQ9P2R6 1566 aa8.58□□□□□ -1.04
TM9SF4-205ENST00000450829 MAST1Q9Y2H9 1570 aa8.58□□□□□ -1.04
TM9SF4-205ENST00000450829 ABCC5O15440 1437 aa8.57□□□□□ -1.04
TM9SF4-205ENST00000450829 C9orf84Q5VXU9 1444 aa8.57□□□□□ -1.04
TM9SF4-205ENST00000450829 PREX1Q8TCU6 1659 aa8.57□□□□□ -1.04
TM9SF4-205ENST00000450829 KIDINS220Q9ULH0 1771 aa8.57□□□□□ -1.04
TM9SF4-205ENST00000450829 ROCK1Q13464 1354 aa8.57□□□□□ -1.04
TM9SF4-205ENST00000450829 ATP10AO60312 1499 aa8.57□□□□□ -1.04
TM9SF4-205ENST00000450829 ZNF518AQ6AHZ1 1483 aa8.57□□□□□ -1.04
TM9SF4-205ENST00000450829 ARID4BQ4LE39 1312 aaPredicted RBP8.56□□□□□ -1.04
TM9SF4-205ENST00000450829 SLC24A1O60721 1099 aa8.56□□□□□ -1.04
TM9SF4-205ENST00000450829 PLXNC1O60486 1568 aa8.56□□□□□ -1.04
TM9SF4-205ENST00000450829 SYCP2Q9BX26 1530 aa8.55□□□□□ -1.04
TM9SF4-205ENST00000450829 SETD1BQ9UPS6 1966 aaKnown RBP8.54□□□□□ -1.04
TM9SF4-205ENST00000450829 C3P01024 1663 aa8.54□□□□□ -1.04
TM9SF4-205ENST00000450829 CCDC141Q6ZP82 1450 aa8.53□□□□□ -1.04
TM9SF4-205ENST00000450829 MLH3Q9UHC1 1453 aa8.53□□□□□ -1.04
TM9SF4-205ENST00000450829 EFCAB2Q5VUJ9 269 aa8.53□□□□□ -1.04
TM9SF4-205ENST00000450829 TRAPPC8Q9Y2L5 1435 aa8.53□□□□□ -1.04
TM9SF4-205ENST00000450829 AGLP35573 1532 aa8.52□□□□□ -1.05
TM9SF4-205ENST00000450829 STRCQ7RTU9 1775 aa8.52□□□□□ -1.05
TM9SF4-205ENST00000450829 INO80Q9ULG1 1556 aaPredicted RBP8.52□□□□□ -1.05
TM9SF4-205ENST00000450829 ZNF644Q9H582 1327 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms