RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 AKNAQ7Z591 1439 aa16.96■□□□□ 0.3
LINC01004-202ENST00000450686 FANCAO15360 1455 aa16.95■□□□□ 0.3
LINC01004-202ENST00000450686 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
LINC01004-202ENST00000450686 DENND4BO75064 1496 aaPredicted RBP16.94■□□□□ 0.3
LINC01004-202ENST00000450686 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
LINC01004-202ENST00000450686 UBTFP17480 764 aaKnown RBP16.93■□□□□ 0.3
LINC01004-202ENST00000450686 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
LINC01004-202ENST00000450686 CFAP74Q9C0B2 1584 aa16.91■□□□□ 0.3
LINC01004-202ENST00000450686 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
LINC01004-202ENST00000450686 KIF14Q15058 1648 aa16.89■□□□□ 0.29
LINC01004-202ENST00000450686 LRRIQ1Q96JM4 1722 aa16.88■□□□□ 0.29
LINC01004-202ENST00000450686 ZFYVE16Q7Z3T8 1539 aa16.88■□□□□ 0.29
LINC01004-202ENST00000450686 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
LINC01004-202ENST00000450686 ZMYM4Q5VZL5 1548 aa16.87■□□□□ 0.29
LINC01004-202ENST00000450686 MLECQ14165 292 aa16.86■□□□□ 0.29
LINC01004-202ENST00000450686 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
LINC01004-202ENST00000450686 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
LINC01004-202ENST00000450686 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
LINC01004-202ENST00000450686 SCAPERQ9BY12 1400 aa16.84■□□□□ 0.29
LINC01004-202ENST00000450686 PLCH2O75038 1416 aa16.83■□□□□ 0.28
LINC01004-202ENST00000450686 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
LINC01004-202ENST00000450686 POGZQ7Z3K3 1410 aa16.83■□□□□ 0.28
LINC01004-202ENST00000450686 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
LINC01004-202ENST00000450686 HSPA2P54652 639 aa16.82■□□□□ 0.28
LINC01004-202ENST00000450686 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
LINC01004-202ENST00000450686 FER1L4A9Z1Z3 1794 aa16.81■□□□□ 0.28
LINC01004-202ENST00000450686 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
LINC01004-202ENST00000450686 ARHGAP5Q13017 1502 aa16.77■□□□□ 0.28
LINC01004-202ENST00000450686 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
LINC01004-202ENST00000450686 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
LINC01004-202ENST00000450686 CDC42BPBQ9Y5S2 1711 aa16.75■□□□□ 0.27
LINC01004-202ENST00000450686 EFCAB2Q5VUJ9 269 aa16.74■□□□□ 0.27
LINC01004-202ENST00000450686 AFAP1Q8N556 730 aa16.73■□□□□ 0.27
LINC01004-202ENST00000450686 ATP10AO60312 1499 aa16.73■□□□□ 0.27
LINC01004-202ENST00000450686 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
LINC01004-202ENST00000450686 CEBPAP49715 358 aaPredicted RBP16.72■□□□□ 0.27
LINC01004-202ENST00000450686 ARHGEF12Q9NZN5 1544 aa16.71■□□□□ 0.27
LINC01004-202ENST00000450686 FBXO41Q8TF61 875 aa16.71■□□□□ 0.27
LINC01004-202ENST00000450686 CDK11AQ9UQ88 783 aaPredicted RBP16.71■□□□□ 0.27
LINC01004-202ENST00000450686 CLIP1P30622 1438 aa16.7■□□□□ 0.26
LINC01004-202ENST00000450686 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
LINC01004-202ENST00000450686 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
LINC01004-202ENST00000450686 KDM5CP41229 1560 aa16.69■□□□□ 0.26
LINC01004-202ENST00000450686 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
LINC01004-202ENST00000450686 PREX2Q70Z35 1606 aa16.69■□□□□ 0.26
LINC01004-202ENST00000450686 ZNF518AQ6AHZ1 1483 aa16.68■□□□□ 0.26
LINC01004-202ENST00000450686 CASKIN1Q8WXD9 1431 aa16.67■□□□□ 0.26
LINC01004-202ENST00000450686 TRAPPC8Q9Y2L5 1435 aa16.67■□□□□ 0.26
LINC01004-202ENST00000450686 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
LINC01004-202ENST00000450686 ABCC1P33527 1531 aa16.66■□□□□ 0.26
LINC01004-202ENST00000450686 ITSN2Q9NZM3 1697 aa16.66■□□□□ 0.26
LINC01004-202ENST00000450686 PREX1Q8TCU6 1659 aa16.64■□□□□ 0.25
LINC01004-202ENST00000450686 CCDC18Q5T9S5 1454 aa16.63■□□□□ 0.25
LINC01004-202ENST00000450686 KIDINS220Q9ULH0 1771 aa16.61■□□□□ 0.25
LINC01004-202ENST00000450686 C3P01024 1663 aa16.6■□□□□ 0.25
LINC01004-202ENST00000450686 ZNF777Q9ULD5 760 aaPredicted RBP16.6■□□□□ 0.25
LINC01004-202ENST00000450686 FYCO1Q9BQS8 1478 aa16.6■□□□□ 0.25
LINC01004-202ENST00000450686 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
LINC01004-202ENST00000450686 MLH3Q9UHC1 1453 aa16.59■□□□□ 0.25
LINC01004-202ENST00000450686 STRCQ7RTU9 1775 aa16.59■□□□□ 0.25
LINC01004-202ENST00000450686 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.24
LINC01004-202ENST00000450686 REREQ9P2R6 1566 aa16.57■□□□□ 0.24
LINC01004-202ENST00000450686 HNRNPMP52272 730 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC01004-202ENST00000450686 CERKQ8TCT0 537 aa16.54■□□□□ 0.24
LINC01004-202ENST00000450686 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
LINC01004-202ENST00000450686 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
LINC01004-202ENST00000450686 SUPT6HQ7KZ85 1726 aaKnown RBP16.53■□□□□ 0.24
LINC01004-202ENST00000450686 AGLP35573 1532 aa16.52■□□□□ 0.24
LINC01004-202ENST00000450686 SETD1BQ9UPS6 1966 aaKnown RBP16.5■□□□□ 0.23
LINC01004-202ENST00000450686 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
LINC01004-202ENST00000450686 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
LINC01004-202ENST00000450686 ATP7AQ04656 1500 aa16.48■□□□□ 0.23
LINC01004-202ENST00000450686 ZNF644Q9H582 1327 aaPredicted RBP16.47■□□□□ 0.23
LINC01004-202ENST00000450686 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
LINC01004-202ENST00000450686 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
LINC01004-202ENST00000450686 CFDP1Q9UEE9 299 aaPredicted RBP16.46■□□□□ 0.23
LINC01004-202ENST00000450686 CCNB3Q8WWL7 1395 aa16.46■□□□□ 0.23
LINC01004-202ENST00000450686 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
LINC01004-202ENST00000450686 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
LINC01004-202ENST00000450686 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
LINC01004-202ENST00000450686 MROH2AA6NES4 1674 aa16.42■□□□□ 0.22
LINC01004-202ENST00000450686 A2MP01023 1474 aa16.42■□□□□ 0.22
LINC01004-202ENST00000450686 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
LINC01004-202ENST00000450686 CAMSAP1Q5T5Y3 1602 aa16.41■□□□□ 0.22
LINC01004-202ENST00000450686 ZMYM3Q14202 1370 aa16.4■□□□□ 0.22
LINC01004-202ENST00000450686 NCOA1Q15788 1441 aa16.4■□□□□ 0.22
LINC01004-202ENST00000450686 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
LINC01004-202ENST00000450686 KIAA1107Q9UPP5 1409 aa16.4■□□□□ 0.22
LINC01004-202ENST00000450686 EHBP1L1Q8N3D4 1523 aa16.4■□□□□ 0.22
LINC01004-202ENST00000450686 GGT6Q6P531 493 aa16.39■□□□□ 0.21
LINC01004-202ENST00000450686 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
LINC01004-202ENST00000450686 MYO3AQ8NEV4 1616 aa16.38■□□□□ 0.21
LINC01004-202ENST00000450686 LTBP4Q8N2S1 1624 aa16.37■□□□□ 0.21
LINC01004-202ENST00000450686 PTPRTO14522 1441 aa16.37■□□□□ 0.21
LINC01004-202ENST00000450686 NCKAP5LQ9HCH0 1330 aa16.37■□□□□ 0.21
LINC01004-202ENST00000450686 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
LINC01004-202ENST00000450686 MBD5Q9P267 1494 aa16.36■□□□□ 0.21
LINC01004-202ENST00000450686 NPATQ14207 1427 aa16.35■□□□□ 0.21
LINC01004-202ENST00000450686 PTPRKQ15262 1439 aa16.35■□□□□ 0.21
LINC01004-202ENST00000450686 ZNF142P52746 1687 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms