RNA–Protein interactions for RNA: ENST00000450454.6

TCEA3-203, Transcript of transcription elongation factor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA3, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-203ENST00000450454 ZMYM4Q5VZL5 1548 aa18.68■□□□□ 0.58
TCEA3-203ENST00000450454 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
TCEA3-203ENST00000450454 MAGI2Q86UL8 1455 aa18.66■□□□□ 0.58
TCEA3-203ENST00000450454 ARHGAP5Q13017 1502 aa18.65■□□□□ 0.58
TCEA3-203ENST00000450454 ZFYVE16Q7Z3T8 1539 aa18.65■□□□□ 0.58
TCEA3-203ENST00000450454 ADAMTSL3P82987 1691 aa18.63■□□□□ 0.57
TCEA3-203ENST00000450454 YEATS2Q9ULM3 1422 aa18.62■□□□□ 0.57
TCEA3-203ENST00000450454 BCORL1Q5H9F3 1711 aa18.62■□□□□ 0.57
TCEA3-203ENST00000450454 PTPRMP28827 1452 aa18.59■□□□□ 0.57
TCEA3-203ENST00000450454 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
TCEA3-203ENST00000450454 HECW2Q9P2P5 1572 aa18.59■□□□□ 0.57
TCEA3-203ENST00000450454 PREX2Q70Z35 1606 aa18.58■□□□□ 0.56
TCEA3-203ENST00000450454 CDC42BPBQ9Y5S2 1711 aa18.57■□□□□ 0.56
TCEA3-203ENST00000450454 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
TCEA3-203ENST00000450454 MADDQ8WXG6 1647 aa18.57■□□□□ 0.56
TCEA3-203ENST00000450454 ATP10AO60312 1499 aa18.55■□□□□ 0.56
TCEA3-203ENST00000450454 AFAP1Q8N556 730 aa18.55■□□□□ 0.56
TCEA3-203ENST00000450454 KDM5CP41229 1560 aa18.53■□□□□ 0.56
TCEA3-203ENST00000450454 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
TCEA3-203ENST00000450454 C9orf84Q5VXU9 1444 aa18.53■□□□□ 0.56
TCEA3-203ENST00000450454 ABCC1P33527 1531 aa18.52■□□□□ 0.55
TCEA3-203ENST00000450454 CDC42BPAQ5VT25 1732 aa18.51■□□□□ 0.55
TCEA3-203ENST00000450454 SIGLEC1Q9BZZ2 1709 aa18.51■□□□□ 0.55
TCEA3-203ENST00000450454 MTUS2Q5JR59 1369 aa18.51■□□□□ 0.55
TCEA3-203ENST00000450454 RIMS1Q86UR5 1692 aaKnown RBP18.5■□□□□ 0.55
TCEA3-203ENST00000450454 MLECQ14165 292 aa18.5■□□□□ 0.55
TCEA3-203ENST00000450454 ARHGEF12Q9NZN5 1544 aa18.49■□□□□ 0.55
TCEA3-203ENST00000450454 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
TCEA3-203ENST00000450454 ZNF777Q9ULD5 760 aaPredicted RBP18.49■□□□□ 0.55
TCEA3-203ENST00000450454 TRAPPC8Q9Y2L5 1435 aa18.48■□□□□ 0.55
TCEA3-203ENST00000450454 MLH3Q9UHC1 1453 aa18.48■□□□□ 0.55
TCEA3-203ENST00000450454 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
TCEA3-203ENST00000450454 CCNB3Q8WWL7 1395 aa18.47■□□□□ 0.55
TCEA3-203ENST00000450454 CFDP1Q9UEE9 299 aaPredicted RBP18.46■□□□□ 0.55
TCEA3-203ENST00000450454 DIP2CQ9Y2E4 1556 aa18.45■□□□□ 0.54
TCEA3-203ENST00000450454 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
TCEA3-203ENST00000450454 SAMD9LQ8IVG5 1584 aa18.44■□□□□ 0.54
TCEA3-203ENST00000450454 REREQ9P2R6 1566 aa18.43■□□□□ 0.54
TCEA3-203ENST00000450454 FER1L4A9Z1Z3 1794 aa18.43■□□□□ 0.54
TCEA3-203ENST00000450454 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
TCEA3-203ENST00000450454 PLEKHH2Q8IVE3 1493 aa18.42■□□□□ 0.54
TCEA3-203ENST00000450454 ABCA6Q8N139 1617 aa18.42■□□□□ 0.54
TCEA3-203ENST00000450454 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
TCEA3-203ENST00000450454 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
TCEA3-203ENST00000450454 KIAA1107Q9UPP5 1409 aa18.4■□□□□ 0.54
TCEA3-203ENST00000450454 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.53
TCEA3-203ENST00000450454 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
TCEA3-203ENST00000450454 SPAG9O60271 1321 aaKnown RBP18.38■□□□□ 0.53
TCEA3-203ENST00000450454 TIAM1Q13009 1591 aa18.38■□□□□ 0.53
TCEA3-203ENST00000450454 VPS8Q8N3P4 1428 aa18.38■□□□□ 0.53
TCEA3-203ENST00000450454 AGLP35573 1532 aa18.38■□□□□ 0.53
TCEA3-203ENST00000450454 ESF1Q9H501 851 aaKnown RBP18.34■□□□□ 0.53
TCEA3-203ENST00000450454 ATP7AQ04656 1500 aa18.33■□□□□ 0.52
TCEA3-203ENST00000450454 SUPT6HQ7KZ85 1726 aaKnown RBP18.33■□□□□ 0.52
TCEA3-203ENST00000450454 NCOA2Q15596 1464 aa18.33■□□□□ 0.52
TCEA3-203ENST00000450454 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
TCEA3-203ENST00000450454 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
TCEA3-203ENST00000450454 INO80Q9ULG1 1556 aaPredicted RBP18.31■□□□□ 0.52
TCEA3-203ENST00000450454 HSPA2P54652 639 aa18.3■□□□□ 0.52
TCEA3-203ENST00000450454 MBD5Q9P267 1494 aa18.28■□□□□ 0.52
TCEA3-203ENST00000450454 LRRC9Q6ZRR7 1453 aa18.28■□□□□ 0.52
TCEA3-203ENST00000450454 A2MP01023 1474 aa18.27■□□□□ 0.52
TCEA3-203ENST00000450454 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.51
TCEA3-203ENST00000450454 PREX1Q8TCU6 1659 aa18.26■□□□□ 0.51
TCEA3-203ENST00000450454 ILDR1Q86SU0 546 aaPredicted RBP18.25■□□□□ 0.51
TCEA3-203ENST00000450454 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
TCEA3-203ENST00000450454 CAMSAP2Q08AD1 1489 aa18.25■□□□□ 0.51
TCEA3-203ENST00000450454 RTEL1-TNFRSF6BF6WH68 1400 aa18.25■□□□□ 0.51
TCEA3-203ENST00000450454 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
TCEA3-203ENST00000450454 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
TCEA3-203ENST00000450454 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
TCEA3-203ENST00000450454 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
TCEA3-203ENST00000450454 C3P01024 1663 aa18.23■□□□□ 0.51
TCEA3-203ENST00000450454 ADGBQ8N7X0 1667 aa18.22■□□□□ 0.51
TCEA3-203ENST00000450454 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
TCEA3-203ENST00000450454 SETD1BQ9UPS6 1966 aaKnown RBP18.21■□□□□ 0.51
TCEA3-203ENST00000450454 APLP2Q06481 763 aa18.19■□□□□ 0.5
TCEA3-203ENST00000450454 GGT6Q6P531 493 aa18.19■□□□□ 0.5
TCEA3-203ENST00000450454 MROH2AA6NES4 1674 aa18.18■□□□□ 0.5
TCEA3-203ENST00000450454 DHX29Q7Z478 1369 aaKnown RBP18.18■□□□□ 0.5
TCEA3-203ENST00000450454 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
TCEA3-203ENST00000450454 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
TCEA3-203ENST00000450454 ARHGEF5Q12774 1597 aa18.17■□□□□ 0.5
TCEA3-203ENST00000450454 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
TCEA3-203ENST00000450454 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
TCEA3-203ENST00000450454 NPATQ14207 1427 aa18.15■□□□□ 0.5
TCEA3-203ENST00000450454 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
TCEA3-203ENST00000450454 MIA2Q96PC5 1412 aa18.14■□□□□ 0.5
TCEA3-203ENST00000450454 CLTCQ00610 1675 aaKnown RBP18.14■□□□□ 0.49
TCEA3-203ENST00000450454 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
TCEA3-203ENST00000450454 KIF3BO15066 747 aa18.11■□□□□ 0.49
TCEA3-203ENST00000450454 FBXO41Q8TF61 875 aa18.11■□□□□ 0.49
TCEA3-203ENST00000450454 PTPRKQ15262 1439 aa18.08■□□□□ 0.48
TCEA3-203ENST00000450454 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
TCEA3-203ENST00000450454 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
TCEA3-203ENST00000450454 FAM135AQ9P2D6 1515 aa18.06■□□□□ 0.48
TCEA3-203ENST00000450454 KDM5DQ9BY66 1539 aa18.04■□□□□ 0.48
TCEA3-203ENST00000450454 WASHC2CQ9Y4E1 1318 aa18.04■□□□□ 0.48
TCEA3-203ENST00000450454 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
TCEA3-203ENST00000450454 PTPRTO14522 1441 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms