RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 MAGI2Q86UL8 1455 aa35.3■■■■□ 3.24
CPSF7-208ENST00000450000 POGZQ7Z3K3 1410 aa35.3■■■■□ 3.24
CPSF7-208ENST00000450000 ZFYVE16Q7Z3T8 1539 aa35.29■■■■□ 3.24
CPSF7-208ENST00000450000 ZMYM4Q5VZL5 1548 aa35.27■■■■□ 3.24
CPSF7-208ENST00000450000 LRRIQ1Q96JM4 1722 aa35.24■■■■□ 3.23
CPSF7-208ENST00000450000 YEATS2Q9ULM3 1422 aa35.23■■■■□ 3.23
CPSF7-208ENST00000450000 PTPRMP28827 1452 aa35.22■■■■□ 3.23
CPSF7-208ENST00000450000 HECW2Q9P2P5 1572 aa35.2■■■■□ 3.23
CPSF7-208ENST00000450000 ADAMTSL3P82987 1691 aa35.2■■■■□ 3.23
CPSF7-208ENST00000450000 MLECQ14165 292 aa35.19■■■■□ 3.22
CPSF7-208ENST00000450000 BCORL1Q5H9F3 1711 aa35.19■■■■□ 3.22
CPSF7-208ENST00000450000 ZNF518AQ6AHZ1 1483 aa35.17■■■■□ 3.22
CPSF7-208ENST00000450000 AFAP1Q8N556 730 aa35.17■■■■□ 3.22
CPSF7-208ENST00000450000 PLPPR3Q6T4P5 718 aa35.13■■■■□ 3.21
CPSF7-208ENST00000450000 ZNF777Q9ULD5 760 aaPredicted RBP35.13■■■■□ 3.21
CPSF7-208ENST00000450000 ATP10AO60312 1499 aa35.12■■■■□ 3.21
CPSF7-208ENST00000450000 MADDQ8WXG6 1647 aa35.11■■■■□ 3.21
CPSF7-208ENST00000450000 CEP162Q5TB80 1403 aa35.1■■■■□ 3.21
CPSF7-208ENST00000450000 MTUS2Q5JR59 1369 aa35.1■■■■□ 3.21
CPSF7-208ENST00000450000 C9orf84Q5VXU9 1444 aa35.08■■■■□ 3.21
CPSF7-208ENST00000450000 PREX2Q70Z35 1606 aa35.06■■■■□ 3.2
CPSF7-208ENST00000450000 CDC42BPBQ9Y5S2 1711 aa35.04■■■■□ 3.2
CPSF7-208ENST00000450000 CCNB3Q8WWL7 1395 aa35.01■■■■□ 3.2
CPSF7-208ENST00000450000 CFDP1Q9UEE9 299 aaPredicted RBP35.01■■■■□ 3.2
CPSF7-208ENST00000450000 RIMS1Q86UR5 1692 aaKnown RBP35.01■■■■□ 3.19
CPSF7-208ENST00000450000 KDM5CP41229 1560 aa34.98■■■■□ 3.19
CPSF7-208ENST00000450000 TRAPPC8Q9Y2L5 1435 aa34.98■■■■□ 3.19
CPSF7-208ENST00000450000 ABCC1P33527 1531 aa34.97■■■■□ 3.19
CPSF7-208ENST00000450000 LOC105371045A0A1W2PR82 267 aa34.95■■■■□ 3.19
CPSF7-208ENST00000450000 GPATCH8Q9UKJ3 1502 aaKnown RBP34.95■■■■□ 3.19
CPSF7-208ENST00000450000 MLH3Q9UHC1 1453 aa34.94■■■■□ 3.18
CPSF7-208ENST00000450000 CDC42BPAQ5VT25 1732 aa34.93■■■■□ 3.18
CPSF7-208ENST00000450000 ARHGEF12Q9NZN5 1544 aa34.92■■■■□ 3.18
CPSF7-208ENST00000450000 ESF1Q9H501 851 aaKnown RBP34.92■■■■□ 3.18
CPSF7-208ENST00000450000 HNRNPMP52272 730 aaKnown RBP eCLIP34.9■■■■□ 3.18
CPSF7-208ENST00000450000 SIGLEC1Q9BZZ2 1709 aa34.89■■■■□ 3.18
CPSF7-208ENST00000450000 ITSN2Q9NZM3 1697 aa34.88■■■■□ 3.17
CPSF7-208ENST00000450000 SPAG9O60271 1321 aaKnown RBP34.87■■■■□ 3.17
CPSF7-208ENST00000450000 PLEKHH2Q8IVE3 1493 aa34.86■■■■□ 3.17
CPSF7-208ENST00000450000 DIP2CQ9Y2E4 1556 aa34.85■■■■□ 3.17
CPSF7-208ENST00000450000 EHBP1L1Q8N3D4 1523 aa34.85■■■■□ 3.17
CPSF7-208ENST00000450000 FER1L4A9Z1Z3 1794 aa34.84■■■■□ 3.17
CPSF7-208ENST00000450000 SYCP2Q9BX26 1530 aa34.82■■■■□ 3.16
CPSF7-208ENST00000450000 SAMD9LQ8IVG5 1584 aa34.82■■■■□ 3.16
CPSF7-208ENST00000450000 KIAA1107Q9UPP5 1409 aa34.81■■■■□ 3.16
CPSF7-208ENST00000450000 ABCA6Q8N139 1617 aa34.79■■■■□ 3.16
CPSF7-208ENST00000450000 REREQ9P2R6 1566 aa34.78■■■■□ 3.16
CPSF7-208ENST00000450000 LMTK3Q96Q04 1460 aa34.78■■■■□ 3.16
CPSF7-208ENST00000450000 CEBPAP49715 358 aaPredicted RBP34.76■■■■□ 3.16
CPSF7-208ENST00000450000 HSPA2P54652 639 aa34.74■■■■□ 3.15
CPSF7-208ENST00000450000 VPS8Q8N3P4 1428 aa34.72■■■■□ 3.15
CPSF7-208ENST00000450000 AGLP35573 1532 aa34.71■■■■□ 3.15
CPSF7-208ENST00000450000 ILDR1Q86SU0 546 aaPredicted RBP34.71■■■■□ 3.15
CPSF7-208ENST00000450000 KIDINS220Q9ULH0 1771 aa34.7■■■■□ 3.15
CPSF7-208ENST00000450000 ZNF644Q9H582 1327 aaPredicted RBP34.7■■■■□ 3.15
CPSF7-208ENST00000450000 TIAM1Q13009 1591 aa34.69■■■■□ 3.14
CPSF7-208ENST00000450000 ATP7AQ04656 1500 aa34.65■■■■□ 3.14
CPSF7-208ENST00000450000 NCOA2Q15596 1464 aa34.65■■■■□ 3.14
CPSF7-208ENST00000450000 SUPT6HQ7KZ85 1726 aaKnown RBP34.62■■■■□ 3.13
CPSF7-208ENST00000450000 APLP2Q06481 763 aa34.61■■■■□ 3.13
CPSF7-208ENST00000450000 CNTLNQ9NXG0 1405 aa34.61■■■■□ 3.13
CPSF7-208ENST00000450000 RSPH4AQ5TD94 716 aa34.59■■■■□ 3.13
CPSF7-208ENST00000450000 A2MP01023 1474 aa34.58■■■■□ 3.13
CPSF7-208ENST00000450000 UHRF1BP1Q6BDS2 1440 aa34.57■■■■□ 3.13
CPSF7-208ENST00000450000 GGT6Q6P531 493 aa34.56■■■■□ 3.12
CPSF7-208ENST00000450000 LRRC9Q6ZRR7 1453 aa34.54■■■■□ 3.12
CPSF7-208ENST00000450000 INO80Q9ULG1 1556 aaPredicted RBP34.53■■■■□ 3.12
CPSF7-208ENST00000450000 MBD5Q9P267 1494 aa34.53■■■■□ 3.12
CPSF7-208ENST00000450000 PREX1Q8TCU6 1659 aa34.5■■■■□ 3.11
CPSF7-208ENST00000450000 RTEL1-TNFRSF6BF6WH68 1400 aa34.5■■■■□ 3.11
CPSF7-208ENST00000450000 TSPY4P0CV99 314 aa34.5■■■■□ 3.11
CPSF7-208ENST00000450000 TSPY10P0CW01 314 aa34.5■■■■□ 3.11
CPSF7-208ENST00000450000 CAMSAP2Q08AD1 1489 aa34.5■■■■□ 3.11
CPSF7-208ENST00000450000 CCDC141Q6ZP82 1450 aa34.48■■■■□ 3.11
CPSF7-208ENST00000450000 KANK4Q5T7N3 995 aaPredicted RBP34.46■■■■□ 3.11
CPSF7-208ENST00000450000 DMRT2Q9Y5R5 561 aa34.45■■■■□ 3.11
CPSF7-208ENST00000450000 ZMYM3Q14202 1370 aa34.45■■■■□ 3.11
CPSF7-208ENST00000450000 PPP6R1Q9UPN7 881 aa34.44■■■■□ 3.1
CPSF7-208ENST00000450000 MAP3K1Q13233 1512 aa34.44■■■■□ 3.1
CPSF7-208ENST00000450000 C3P01024 1663 aa34.44■■■■□ 3.1
CPSF7-208ENST00000450000 PLXNC1O60486 1568 aa34.42■■■■□ 3.1
CPSF7-208ENST00000450000 SETD1BQ9UPS6 1966 aaKnown RBP34.42■■■■□ 3.1
CPSF7-208ENST00000450000 ADGBQ8N7X0 1667 aa34.41■■■■□ 3.1
CPSF7-208ENST00000450000 DHX29Q7Z478 1369 aaKnown RBP34.41■■■■□ 3.1
CPSF7-208ENST00000450000 FBXO41Q8TF61 875 aa34.39■■■■□ 3.1
CPSF7-208ENST00000450000 KIF3BO15066 747 aa34.38■■■■□ 3.09
CPSF7-208ENST00000450000 NPATQ14207 1427 aa34.35■■■■□ 3.09
CPSF7-208ENST00000450000 MROH2AA6NES4 1674 aa34.32■■■■□ 3.08
CPSF7-208ENST00000450000 MYOM3Q5VTT5 1437 aa34.31■■■■□ 3.08
CPSF7-208ENST00000450000 ARHGEF5Q12774 1597 aa34.31■■■■□ 3.08
CPSF7-208ENST00000450000 MIA2Q96PC5 1412 aa34.3■■■■□ 3.08
CPSF7-208ENST00000450000 CLTCQ00610 1675 aaKnown RBP34.3■■■■□ 3.08
CPSF7-208ENST00000450000 WASHC2CQ9Y4E1 1318 aa34.26■■■■□ 3.07
CPSF7-208ENST00000450000 CERKQ8TCT0 537 aa34.22■■■■□ 3.07
CPSF7-208ENST00000450000 PTPRKQ15262 1439 aa34.21■■■■□ 3.07
CPSF7-208ENST00000450000 PTPRTO14522 1441 aa34.14■■■■□ 3.06
CPSF7-208ENST00000450000 STRCQ7RTU9 1775 aa34.13■■■■□ 3.05
CPSF7-208ENST00000450000 NCOA1Q15788 1441 aa34.13■■■■□ 3.05
CPSF7-208ENST00000450000 KDM5DQ9BY66 1539 aa34.12■■■■□ 3.05
CPSF7-208ENST00000450000 MAST1Q9Y2H9 1570 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms