RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 ARHGAP5Q13017 1502 aa27.92■■■□□ 2.06
CLTCL1-203ENST00000449918 ZMYM4Q5VZL5 1548 aa27.92■■■□□ 2.06
CLTCL1-203ENST00000449918 ARHGEF40Q8TER5 1519 aa27.92■■■□□ 2.06
CLTCL1-203ENST00000449918 ZFYVE16Q7Z3T8 1539 aa27.88■■■□□ 2.05
CLTCL1-203ENST00000449918 YEATS2Q9ULM3 1422 aa27.85■■■□□ 2.05
CLTCL1-203ENST00000449918 ADAMTSL3P82987 1691 aa27.84■■■□□ 2.05
CLTCL1-203ENST00000449918 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
CLTCL1-203ENST00000449918 ZNF518AQ6AHZ1 1483 aa27.82■■■□□ 2.04
CLTCL1-203ENST00000449918 BCORL1Q5H9F3 1711 aa27.81■■■□□ 2.04
CLTCL1-203ENST00000449918 AFAP1Q8N556 730 aa27.81■■■□□ 2.04
CLTCL1-203ENST00000449918 PTPRMP28827 1452 aa27.81■■■□□ 2.04
CLTCL1-203ENST00000449918 MYT1LQ9UL68 1186 aa27.79■■■□□ 2.04
CLTCL1-203ENST00000449918 ATP10AO60312 1499 aa27.77■■■□□ 2.04
CLTCL1-203ENST00000449918 CDC42BPBQ9Y5S2 1711 aa27.76■■■□□ 2.03
CLTCL1-203ENST00000449918 PREX2Q70Z35 1606 aa27.76■■■□□ 2.03
CLTCL1-203ENST00000449918 MTUS2Q5JR59 1369 aa27.75■■■□□ 2.03
CLTCL1-203ENST00000449918 HECW2Q9P2P5 1572 aa27.75■■■□□ 2.03
CLTCL1-203ENST00000449918 LOC105371045A0A1W2PR82 267 aa27.73■■■□□ 2.03
CLTCL1-203ENST00000449918 C9orf84Q5VXU9 1444 aa27.73■■■□□ 2.03
CLTCL1-203ENST00000449918 MADDQ8WXG6 1647 aa27.72■■■□□ 2.03
CLTCL1-203ENST00000449918 MLECQ14165 292 aa27.72■■■□□ 2.03
CLTCL1-203ENST00000449918 ZNF777Q9ULD5 760 aaPredicted RBP27.72■■■□□ 2.03
CLTCL1-203ENST00000449918 KDM5CP41229 1560 aa27.71■■■□□ 2.03
CLTCL1-203ENST00000449918 GPATCH8Q9UKJ3 1502 aaKnown RBP27.7■■■□□ 2.02
CLTCL1-203ENST00000449918 ABCC1P33527 1531 aa27.69■■■□□ 2.02
CLTCL1-203ENST00000449918 CFDP1Q9UEE9 299 aaPredicted RBP27.69■■■□□ 2.02
CLTCL1-203ENST00000449918 CCNB3Q8WWL7 1395 aa27.69■■■□□ 2.02
CLTCL1-203ENST00000449918 TRAPPC8Q9Y2L5 1435 aa27.68■■■□□ 2.02
CLTCL1-203ENST00000449918 MLH3Q9UHC1 1453 aa27.68■■■□□ 2.02
CLTCL1-203ENST00000449918 ARHGEF12Q9NZN5 1544 aa27.67■■■□□ 2.02
CLTCL1-203ENST00000449918 CDC42BPAQ5VT25 1732 aa27.67■■■□□ 2.02
CLTCL1-203ENST00000449918 SIGLEC1Q9BZZ2 1709 aa27.64■■■□□ 2.02
CLTCL1-203ENST00000449918 RIMS1Q86UR5 1692 aaKnown RBP27.62■■■□□ 2.01
CLTCL1-203ENST00000449918 ITSN2Q9NZM3 1697 aa27.6■■■□□ 2.01
CLTCL1-203ENST00000449918 PLEKHH2Q8IVE3 1493 aa27.6■■■□□ 2.01
CLTCL1-203ENST00000449918 HNRNPMP52272 730 aaKnown RBP eCLIP27.6■■■□□ 2.01
CLTCL1-203ENST00000449918 PLPPR3Q6T4P5 718 aa27.6■■■□□ 2.01
CLTCL1-203ENST00000449918 KIAA1107Q9UPP5 1409 aa27.59■■■□□ 2.01
CLTCL1-203ENST00000449918 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
CLTCL1-203ENST00000449918 SAMD9LQ8IVG5 1584 aa27.58■■■□□ 2.01
CLTCL1-203ENST00000449918 DIP2CQ9Y2E4 1556 aa27.57■■■□□ 2
CLTCL1-203ENST00000449918 SPAG9O60271 1321 aaKnown RBP27.56■■■□□ 2
CLTCL1-203ENST00000449918 REREQ9P2R6 1566 aa27.55■■■□□ 2
CLTCL1-203ENST00000449918 VPS8Q8N3P4 1428 aa27.54■■■□□ 2
CLTCL1-203ENST00000449918 SYCP2Q9BX26 1530 aa27.54■■■□□ 2
CLTCL1-203ENST00000449918 ABCA6Q8N139 1617 aa27.52■■■□□ 2
CLTCL1-203ENST00000449918 FER1L4A9Z1Z3 1794 aa27.51■■□□□ 1.99
CLTCL1-203ENST00000449918 TIAM1Q13009 1591 aa27.49■■□□□ 1.99
CLTCL1-203ENST00000449918 ESF1Q9H501 851 aaKnown RBP27.49■■□□□ 1.99
CLTCL1-203ENST00000449918 AGLP35573 1532 aa27.49■■□□□ 1.99
CLTCL1-203ENST00000449918 KIDINS220Q9ULH0 1771 aa27.48■■□□□ 1.99
CLTCL1-203ENST00000449918 LMTK3Q96Q04 1460 aa27.48■■□□□ 1.99
CLTCL1-203ENST00000449918 ZNF644Q9H582 1327 aaPredicted RBP27.47■■□□□ 1.99
CLTCL1-203ENST00000449918 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
CLTCL1-203ENST00000449918 CEBPAP49715 358 aaPredicted RBP27.44■■□□□ 1.98
CLTCL1-203ENST00000449918 SUPT6HQ7KZ85 1726 aaKnown RBP27.42■■□□□ 1.98
CLTCL1-203ENST00000449918 ATP7AQ04656 1500 aa27.41■■□□□ 1.98
CLTCL1-203ENST00000449918 LRRC9Q6ZRR7 1453 aa27.39■■□□□ 1.98
CLTCL1-203ENST00000449918 MBD5Q9P267 1494 aa27.39■■□□□ 1.98
CLTCL1-203ENST00000449918 RSPH4AQ5TD94 716 aa27.39■■□□□ 1.98
CLTCL1-203ENST00000449918 HSPA2P54652 639 aa27.38■■□□□ 1.97
CLTCL1-203ENST00000449918 MAP3K1Q13233 1512 aa27.36■■□□□ 1.97
CLTCL1-203ENST00000449918 A2MP01023 1474 aa27.36■■□□□ 1.97
CLTCL1-203ENST00000449918 INO80Q9ULG1 1556 aaPredicted RBP27.35■■□□□ 1.97
CLTCL1-203ENST00000449918 CNTLNQ9NXG0 1405 aa27.35■■□□□ 1.97
CLTCL1-203ENST00000449918 RTEL1-TNFRSF6BF6WH68 1400 aa27.33■■□□□ 1.97
CLTCL1-203ENST00000449918 APLP2Q06481 763 aa27.33■■□□□ 1.97
CLTCL1-203ENST00000449918 KANK4Q5T7N3 995 aaPredicted RBP27.33■■□□□ 1.97
CLTCL1-203ENST00000449918 CAMSAP2Q08AD1 1489 aa27.31■■□□□ 1.96
CLTCL1-203ENST00000449918 ILDR1Q86SU0 546 aaPredicted RBP27.29■■□□□ 1.96
CLTCL1-203ENST00000449918 CCDC141Q6ZP82 1450 aa27.29■■□□□ 1.96
CLTCL1-203ENST00000449918 GGT6Q6P531 493 aa27.28■■□□□ 1.96
CLTCL1-203ENST00000449918 PLXNC1O60486 1568 aa27.27■■□□□ 1.96
CLTCL1-203ENST00000449918 UHRF1BP1Q6BDS2 1440 aa27.27■■□□□ 1.96
CLTCL1-203ENST00000449918 TSPY4P0CV99 314 aa27.27■■□□□ 1.96
CLTCL1-203ENST00000449918 TSPY10P0CW01 314 aa27.27■■□□□ 1.96
CLTCL1-203ENST00000449918 PPP6R1Q9UPN7 881 aa27.27■■□□□ 1.96
CLTCL1-203ENST00000449918 PREX1Q8TCU6 1659 aa27.25■■□□□ 1.95
CLTCL1-203ENST00000449918 ZMYM3Q14202 1370 aa27.24■■□□□ 1.95
CLTCL1-203ENST00000449918 DHX29Q7Z478 1369 aaKnown RBP27.24■■□□□ 1.95
CLTCL1-203ENST00000449918 SETD1BQ9UPS6 1966 aaKnown RBP27.24■■□□□ 1.95
CLTCL1-203ENST00000449918 C3P01024 1663 aa27.24■■□□□ 1.95
CLTCL1-203ENST00000449918 ADGBQ8N7X0 1667 aa27.24■■□□□ 1.95
CLTCL1-203ENST00000449918 MIA2Q96PC5 1412 aa27.21■■□□□ 1.95
CLTCL1-203ENST00000449918 ARHGEF5Q12774 1597 aa27.19■■□□□ 1.94
CLTCL1-203ENST00000449918 MYOM3Q5VTT5 1437 aa27.19■■□□□ 1.94
CLTCL1-203ENST00000449918 NPATQ14207 1427 aa27.17■■□□□ 1.94
CLTCL1-203ENST00000449918 KIF3BO15066 747 aa27.17■■□□□ 1.94
CLTCL1-203ENST00000449918 MROH2AA6NES4 1674 aa27.17■■□□□ 1.94
CLTCL1-203ENST00000449918 DMRT2Q9Y5R5 561 aa27.16■■□□□ 1.94
CLTCL1-203ENST00000449918 CLTCQ00610 1675 aaKnown RBP27.11■■□□□ 1.93
CLTCL1-203ENST00000449918 FBXO41Q8TF61 875 aa27.09■■□□□ 1.93
CLTCL1-203ENST00000449918 PTPRKQ15262 1439 aa27.07■■□□□ 1.92
CLTCL1-203ENST00000449918 WASHC2CQ9Y4E1 1318 aa27.06■■□□□ 1.92
CLTCL1-203ENST00000449918 MAST1Q9Y2H9 1570 aa27.05■■□□□ 1.92
CLTCL1-203ENST00000449918 FAM135AQ9P2D6 1515 aa27.01■■□□□ 1.91
CLTCL1-203ENST00000449918 STRCQ7RTU9 1775 aa27■■□□□ 1.91
CLTCL1-203ENST00000449918 KDM5DQ9BY66 1539 aa26.99■■□□□ 1.91
CLTCL1-203ENST00000449918 CERKQ8TCT0 537 aa26.98■■□□□ 1.91
CLTCL1-203ENST00000449918 PTPRTO14522 1441 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms