RNA–Protein interactions for RNA: ENST00000449911.2

SSU72P1-201, Transcript of SSU72 pseudogene 1, humanhuman

BASIC

Gene SSU72P1, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72P1-201ENST00000449911 PLEKHD1A6NEE1 506 aa15.33■□□□□ 0.04
SSU72P1-201ENST00000449911 CD109Q6YHK3 1445 aa15.32■□□□□ 0.04
SSU72P1-201ENST00000449911 CASKIN1Q8WXD9 1431 aa15.32■□□□□ 0.04
SSU72P1-201ENST00000449911 CDK13Q14004 1512 aaKnown RBP15.32■□□□□ 0.04
SSU72P1-201ENST00000449911 PCF11O94913 1555 aaKnown RBP15.32■□□□□ 0.04
SSU72P1-201ENST00000449911 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
SSU72P1-201ENST00000449911 FYCO1Q9BQS8 1478 aa15.31■□□□□ 0.04
SSU72P1-201ENST00000449911 KDM6BO15054 1643 aa15.31■□□□□ 0.04
SSU72P1-201ENST00000449911 CCDC18Q5T9S5 1454 aa15.3■□□□□ 0.04
SSU72P1-201ENST00000449911 PPRC1Q5VV67 1664 aaKnown RBP15.29■□□□□ 0.04
SSU72P1-201ENST00000449911 ABCA9Q8IUA7 1624 aa15.28■□□□□ 0.04
SSU72P1-201ENST00000449911 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
SSU72P1-201ENST00000449911 MAGI3Q5TCQ9 1506 aa15.27■□□□□ 0.04
SSU72P1-201ENST00000449911 KIF14Q15058 1648 aa15.22■□□□□ 0.03
SSU72P1-201ENST00000449911 TROQ12816 1431 aaPredicted RBP15.22■□□□□ 0.03
SSU72P1-201ENST00000449911 LRRIQ1Q96JM4 1722 aa15.21■□□□□ 0.03
SSU72P1-201ENST00000449911 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.21■□□□□ 0.03
SSU72P1-201ENST00000449911 PHLDB1Q86UU1 1377 aa15.2■□□□□ 0.02
SSU72P1-201ENST00000449911 TTC37Q6PGP7 1564 aa15.19■□□□□ 0.02
SSU72P1-201ENST00000449911 NEO1Q92859 1461 aa15.19■□□□□ 0.02
SSU72P1-201ENST00000449911 CFAP74Q9C0B2 1584 aa15.19■□□□□ 0.02
SSU72P1-201ENST00000449911 POLA2Q14181 598 aa15.17■□□□□ 0.02
SSU72P1-201ENST00000449911 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
SSU72P1-201ENST00000449911 FANCAO15360 1455 aa15.14■□□□□ 0.01
SSU72P1-201ENST00000449911 ARAP3Q8WWN8 1544 aa15.14■□□□□ 0.01
SSU72P1-201ENST00000449911 ZBTB22O15209 634 aa15.14■□□□□ 0.01
SSU72P1-201ENST00000449911 MYO5CQ9NQX4 1742 aa15.14■□□□□ 0.01
SSU72P1-201ENST00000449911 MTUS2Q5JR59 1369 aa15.13■□□□□ 0.01
SSU72P1-201ENST00000449911 COL17A1Q9UMD9 1497 aaPredicted RBP15.13■□□□□ 0.01
SSU72P1-201ENST00000449911 PLCH2O75038 1416 aa15.12■□□□□ 0.01
SSU72P1-201ENST00000449911 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
SSU72P1-201ENST00000449911 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
SSU72P1-201ENST00000449911 ARHGAP5Q13017 1502 aa15.1■□□□□ 0.01
SSU72P1-201ENST00000449911 EHBP1L1Q8N3D4 1523 aa15.1■□□□□ 0.01
SSU72P1-201ENST00000449911 EFCAB2Q5VUJ9 269 aa15.09■□□□□ 0.01
SSU72P1-201ENST00000449911 DENND4BO75064 1496 aaPredicted RBP15.08■□□□□ 0
SSU72P1-201ENST00000449911 ADGRL1O94910 1474 aa15.08■□□□□ 0
SSU72P1-201ENST00000449911 TIAM1Q13009 1591 aa15.07■□□□□ 0
SSU72P1-201ENST00000449911 PREX2Q70Z35 1606 aa15.06■□□□□ 0
SSU72P1-201ENST00000449911 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
SSU72P1-201ENST00000449911 RAPGEF3O95398 923 aa15.04■□□□□ -0
SSU72P1-201ENST00000449911 SCAPERQ9BY12 1400 aa15.03■□□□□ -0
SSU72P1-201ENST00000449911 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
SSU72P1-201ENST00000449911 MAP3K1Q13233 1512 aa15.02■□□□□ -0
SSU72P1-201ENST00000449911 FRMPD1Q5SYB0 1578 aa15.02□□□□□ -0.01
SSU72P1-201ENST00000449911 POGZQ7Z3K3 1410 aa15.01□□□□□ -0.01
SSU72P1-201ENST00000449911 CDC42BPAQ5VT25 1732 aa15.01□□□□□ -0.01
SSU72P1-201ENST00000449911 SUPT6HQ7KZ85 1726 aaKnown RBP15.01□□□□□ -0.01
SSU72P1-201ENST00000449911 CDC42BPBQ9Y5S2 1711 aa15.01□□□□□ -0.01
SSU72P1-201ENST00000449911 RICTORQ6R327 1708 aa15□□□□□ -0.01
SSU72P1-201ENST00000449911 GPATCH8Q9UKJ3 1502 aaKnown RBP15□□□□□ -0.01
SSU72P1-201ENST00000449911 LRRC9Q6ZRR7 1453 aa15□□□□□ -0.01
SSU72P1-201ENST00000449911 ITSN2Q9NZM3 1697 aa15□□□□□ -0.01
SSU72P1-201ENST00000449911 ZMYM4Q5VZL5 1548 aa14.99□□□□□ -0.01
SSU72P1-201ENST00000449911 ZNF518AQ6AHZ1 1483 aa14.99□□□□□ -0.01
SSU72P1-201ENST00000449911 ABCC1P33527 1531 aa14.98□□□□□ -0.01
SSU72P1-201ENST00000449911 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
SSU72P1-201ENST00000449911 ARHGEF40Q8TER5 1519 aa14.97□□□□□ -0.01
SSU72P1-201ENST00000449911 NCOA2Q15596 1464 aa14.97□□□□□ -0.01
SSU72P1-201ENST00000449911 MAGI2Q86UL8 1455 aa14.97□□□□□ -0.01
SSU72P1-201ENST00000449911 ZNF777Q9ULD5 760 aaPredicted RBP14.97□□□□□ -0.01
SSU72P1-201ENST00000449911 ZFYVE16Q7Z3T8 1539 aa14.97□□□□□ -0.01
SSU72P1-201ENST00000449911 PLEKHH2Q8IVE3 1493 aa14.96□□□□□ -0.01
SSU72P1-201ENST00000449911 POTEHQ6S545 545 aa14.96□□□□□ -0.01
SSU72P1-201ENST00000449911 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
SSU72P1-201ENST00000449911 SAMD9LQ8IVG5 1584 aa14.94□□□□□ -0.02
SSU72P1-201ENST00000449911 KDM5CP41229 1560 aa14.93□□□□□ -0.02
SSU72P1-201ENST00000449911 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
SSU72P1-201ENST00000449911 HECW2Q9P2P5 1572 aa14.92□□□□□ -0.02
SSU72P1-201ENST00000449911 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
SSU72P1-201ENST00000449911 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
SSU72P1-201ENST00000449911 AFAP1Q8N556 730 aa14.91□□□□□ -0.02
SSU72P1-201ENST00000449911 ARID4BQ4LE39 1312 aaPredicted RBP14.91□□□□□ -0.02
SSU72P1-201ENST00000449911 KANK4Q5T7N3 995 aaPredicted RBP14.9□□□□□ -0.02
SSU72P1-201ENST00000449911 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
SSU72P1-201ENST00000449911 ARHGEF12Q9NZN5 1544 aa14.9□□□□□ -0.02
SSU72P1-201ENST00000449911 YEATS2Q9ULM3 1422 aa14.89□□□□□ -0.03
SSU72P1-201ENST00000449911 TRAPPC8Q9Y2L5 1435 aa14.89□□□□□ -0.03
SSU72P1-201ENST00000449911 C9orf84Q5VXU9 1444 aa14.88□□□□□ -0.03
SSU72P1-201ENST00000449911 MLH3Q9UHC1 1453 aa14.88□□□□□ -0.03
SSU72P1-201ENST00000449911 KDM4FA0A1W2PPD8 638 aa14.87□□□□□ -0.03
SSU72P1-201ENST00000449911 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
SSU72P1-201ENST00000449911 ATP10AO60312 1499 aa14.87□□□□□ -0.03
SSU72P1-201ENST00000449911 CAMSAP2Q08AD1 1489 aa14.87□□□□□ -0.03
SSU72P1-201ENST00000449911 MYOM3Q5VTT5 1437 aa14.86□□□□□ -0.03
SSU72P1-201ENST00000449911 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
SSU72P1-201ENST00000449911 MIA2Q96PC5 1412 aa14.84□□□□□ -0.03
SSU72P1-201ENST00000449911 DIP2CQ9Y2E4 1556 aa14.84□□□□□ -0.03
SSU72P1-201ENST00000449911 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
SSU72P1-201ENST00000449911 ABCA6Q8N139 1617 aa14.83□□□□□ -0.04
SSU72P1-201ENST00000449911 CCDC141Q6ZP82 1450 aa14.82□□□□□ -0.04
SSU72P1-201ENST00000449911 ATP7AQ04656 1500 aa14.82□□□□□ -0.04
SSU72P1-201ENST00000449911 RSPH4AQ5TD94 716 aa14.82□□□□□ -0.04
SSU72P1-201ENST00000449911 BCORL1Q5H9F3 1711 aa14.82□□□□□ -0.04
SSU72P1-201ENST00000449911 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
SSU72P1-201ENST00000449911 REREQ9P2R6 1566 aa14.81□□□□□ -0.04
SSU72P1-201ENST00000449911 INO80Q9ULG1 1556 aaPredicted RBP14.81□□□□□ -0.04
SSU72P1-201ENST00000449911 KIDINS220Q9ULH0 1771 aa14.8□□□□□ -0.04
SSU72P1-201ENST00000449911 ARHGEF5Q12774 1597 aa14.8□□□□□ -0.04
SSU72P1-201ENST00000449911 ADAMTSL3P82987 1691 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms