RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
CCDC171-203ENST00000449575 TEX14Q8IWB6 1497 aa15.3■□□□□ 0.04
CCDC171-203ENST00000449575 PHLDB1Q86UU1 1377 aa15.29■□□□□ 0.04
CCDC171-203ENST00000449575 ITSN2Q9NZM3 1697 aa15.28■□□□□ 0.04
CCDC171-203ENST00000449575 ARAP3Q8WWN8 1544 aa15.27■□□□□ 0.03
CCDC171-203ENST00000449575 SAMD9LQ8IVG5 1584 aa15.27■□□□□ 0.03
CCDC171-203ENST00000449575 KDM6BO15054 1643 aa15.27■□□□□ 0.03
CCDC171-203ENST00000449575 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.03
CCDC171-203ENST00000449575 ZNF777Q9ULD5 760 aaPredicted RBP15.27■□□□□ 0.03
CCDC171-203ENST00000449575 ZNF644Q9H582 1327 aaPredicted RBP15.26■□□□□ 0.03
CCDC171-203ENST00000449575 AKNAQ7Z591 1439 aa15.26■□□□□ 0.03
CCDC171-203ENST00000449575 NEO1Q92859 1461 aa15.25■□□□□ 0.03
CCDC171-203ENST00000449575 EFCAB2Q5VUJ9 269 aa15.25■□□□□ 0.03
CCDC171-203ENST00000449575 CFDP1Q9UEE9 299 aaPredicted RBP15.25■□□□□ 0.03
CCDC171-203ENST00000449575 CFAP74Q9C0B2 1584 aa15.24■□□□□ 0.03
CCDC171-203ENST00000449575 ARHGEF12Q9NZN5 1544 aa15.24■□□□□ 0.03
CCDC171-203ENST00000449575 MYOM3Q5VTT5 1437 aa15.23■□□□□ 0.03
CCDC171-203ENST00000449575 ADGRL1O94910 1474 aa15.23■□□□□ 0.03
CCDC171-203ENST00000449575 RAPGEF3O95398 923 aa15.23■□□□□ 0.03
CCDC171-203ENST00000449575 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
CCDC171-203ENST00000449575 FRMPD1Q5SYB0 1578 aa15.22■□□□□ 0.03
CCDC171-203ENST00000449575 ABCC1P33527 1531 aa15.22■□□□□ 0.03
CCDC171-203ENST00000449575 SCAPERQ9BY12 1400 aa15.21■□□□□ 0.03
CCDC171-203ENST00000449575 SYCP2Q9BX26 1530 aa15.21■□□□□ 0.03
CCDC171-203ENST00000449575 HNRNPMP52272 730 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCDC171-203ENST00000449575 CAMSAP2Q08AD1 1489 aa15.19■□□□□ 0.02
CCDC171-203ENST00000449575 PTPN23Q9H3S7 1636 aa15.18■□□□□ 0.02
CCDC171-203ENST00000449575 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
CCDC171-203ENST00000449575 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
CCDC171-203ENST00000449575 AFAP1Q8N556 730 aa15.17■□□□□ 0.02
CCDC171-203ENST00000449575 DENND4BO75064 1496 aaPredicted RBP15.17■□□□□ 0.02
CCDC171-203ENST00000449575 POGZQ7Z3K3 1410 aa15.15■□□□□ 0.02
CCDC171-203ENST00000449575 MIA2Q96PC5 1412 aa15.15■□□□□ 0.02
CCDC171-203ENST00000449575 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
CCDC171-203ENST00000449575 SLC24A1O60721 1099 aa15.13■□□□□ 0.01
CCDC171-203ENST00000449575 KIAA1107Q9UPP5 1409 aa15.12■□□□□ 0.01
CCDC171-203ENST00000449575 KDM5CP41229 1560 aa15.12■□□□□ 0.01
CCDC171-203ENST00000449575 TCOF1Q13428 1488 aaKnown RBP15.11■□□□□ 0.01
CCDC171-203ENST00000449575 ZNF518AQ6AHZ1 1483 aa15.11■□□□□ 0.01
CCDC171-203ENST00000449575 PLEKHH2Q8IVE3 1493 aa15.11■□□□□ 0.01
CCDC171-203ENST00000449575 FAM50AQ14320 339 aaKnown RBP15.11■□□□□ 0.01
CCDC171-203ENST00000449575 KIDINS220Q9ULH0 1771 aa15.1■□□□□ 0.01
CCDC171-203ENST00000449575 YEATS2Q9ULM3 1422 aa15.1■□□□□ 0.01
CCDC171-203ENST00000449575 ZMYM4Q5VZL5 1548 aa15.09■□□□□ 0.01
CCDC171-203ENST00000449575 ARHGEF5Q12774 1597 aa15.09■□□□□ 0.01
CCDC171-203ENST00000449575 HECW2Q9P2P5 1572 aa15.08■□□□□ 0
CCDC171-203ENST00000449575 SIGLEC1Q9BZZ2 1709 aa15.08■□□□□ 0
CCDC171-203ENST00000449575 CROCC2H7BZ55 1655 aa15.07■□□□□ 0
CCDC171-203ENST00000449575 CCDC141Q6ZP82 1450 aa15.07■□□□□ 0
CCDC171-203ENST00000449575 DNMT1P26358 1616 aaKnown RBP15.07■□□□□ 0
CCDC171-203ENST00000449575 ABCA6Q8N139 1617 aa15.06■□□□□ 0
CCDC171-203ENST00000449575 RRBP1Q9P2E9 1410 aaKnown RBP15.06■□□□□ 0
CCDC171-203ENST00000449575 INO80Q9ULG1 1556 aaPredicted RBP15.06■□□□□ 0
CCDC171-203ENST00000449575 ABCC5O15440 1437 aa15.06■□□□□ 0
CCDC171-203ENST00000449575 ZFYVE16Q7Z3T8 1539 aa15.05■□□□□ -0
CCDC171-203ENST00000449575 MYT1LQ9UL68 1186 aa15.05■□□□□ -0
CCDC171-203ENST00000449575 ATP7AQ04656 1500 aa15.05■□□□□ -0
CCDC171-203ENST00000449575 ARHGEF40Q8TER5 1519 aa15.04■□□□□ -0
CCDC171-203ENST00000449575 DAPK1P53355 1430 aa15.04■□□□□ -0
CCDC171-203ENST00000449575 SPAG9O60271 1321 aaKnown RBP15.04■□□□□ -0
CCDC171-203ENST00000449575 MLH3Q9UHC1 1453 aa15.04■□□□□ -0
CCDC171-203ENST00000449575 PTPRKQ15262 1439 aa15.04■□□□□ -0
CCDC171-203ENST00000449575 DIP2CQ9Y2E4 1556 aa15.04■□□□□ -0
CCDC171-203ENST00000449575 ITGAEP38570 1179 aa15.03■□□□□ -0
CCDC171-203ENST00000449575 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
CCDC171-203ENST00000449575 ADGBQ8N7X0 1667 aa15.02■□□□□ -0
CCDC171-203ENST00000449575 MAGI2Q86UL8 1455 aa15.01□□□□□ -0.01
CCDC171-203ENST00000449575 C9orf84Q5VXU9 1444 aa15.01□□□□□ -0.01
CCDC171-203ENST00000449575 MAST1Q9Y2H9 1570 aa15□□□□□ -0.01
CCDC171-203ENST00000449575 TSPY4P0CV99 314 aa14.99□□□□□ -0.01
CCDC171-203ENST00000449575 TSPY10P0CW01 314 aa14.99□□□□□ -0.01
CCDC171-203ENST00000449575 RSPH4AQ5TD94 716 aa14.99□□□□□ -0.01
CCDC171-203ENST00000449575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC171-203ENST00000449575 ATP10AO60312 1499 aa14.97□□□□□ -0.01
CCDC171-203ENST00000449575 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
CCDC171-203ENST00000449575 SHANK2Q9UPX8 1470 aa14.97□□□□□ -0.01
CCDC171-203ENST00000449575 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
CCDC171-203ENST00000449575 PLXNC1O60486 1568 aa14.95□□□□□ -0.02
CCDC171-203ENST00000449575 A2MP01023 1474 aa14.93□□□□□ -0.02
CCDC171-203ENST00000449575 NCOA1Q15788 1441 aa14.93□□□□□ -0.02
CCDC171-203ENST00000449575 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
CCDC171-203ENST00000449575 REREQ9P2R6 1566 aa14.92□□□□□ -0.02
CCDC171-203ENST00000449575 ADGRL2O95490 1459 aa14.92□□□□□ -0.02
CCDC171-203ENST00000449575 KIF15Q9NS87 1388 aa14.91□□□□□ -0.02
CCDC171-203ENST00000449575 MLECQ14165 292 aa14.91□□□□□ -0.02
CCDC171-203ENST00000449575 BCORL1Q5H9F3 1711 aa14.9□□□□□ -0.02
CCDC171-203ENST00000449575 ANKRD30AQ9BXX3 1397 aa14.89□□□□□ -0.03
CCDC171-203ENST00000449575 DHX29Q7Z478 1369 aaKnown RBP14.89□□□□□ -0.03
CCDC171-203ENST00000449575 DUOX2Q9NRD8 1548 aa14.88□□□□□ -0.03
CCDC171-203ENST00000449575 AGLP35573 1532 aa14.87□□□□□ -0.03
CCDC171-203ENST00000449575 ROCK1Q13464 1354 aa14.86□□□□□ -0.03
CCDC171-203ENST00000449575 KIF3BO15066 747 aa14.86□□□□□ -0.03
CCDC171-203ENST00000449575 KDM4FA0A1W2PPD8 638 aa14.85□□□□□ -0.03
CCDC171-203ENST00000449575 ADAMTSL3P82987 1691 aa14.85□□□□□ -0.03
CCDC171-203ENST00000449575 MADDQ8WXG6 1647 aa14.85□□□□□ -0.03
CCDC171-203ENST00000449575 GCC2Q8IWJ2 1684 aa14.84□□□□□ -0.03
CCDC171-203ENST00000449575 GGT6Q6P531 493 aa14.84□□□□□ -0.03
CCDC171-203ENST00000449575 FER1L4A9Z1Z3 1794 aa14.83□□□□□ -0.03
CCDC171-203ENST00000449575 NAIPQ13075 1403 aa14.83□□□□□ -0.04
CCDC171-203ENST00000449575 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms