RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
SMPD4-211ENST00000449159 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
SMPD4-211ENST00000449159 BCORL1Q5H9F3 1711 aa16.74■□□□□ 0.27
SMPD4-211ENST00000449159 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
SMPD4-211ENST00000449159 ARHGEF40Q8TER5 1519 aa16.73■□□□□ 0.27
SMPD4-211ENST00000449159 NEO1Q92859 1461 aa16.73■□□□□ 0.27
SMPD4-211ENST00000449159 RICTORQ6R327 1708 aa16.72■□□□□ 0.27
SMPD4-211ENST00000449159 PLCH2O75038 1416 aa16.71■□□□□ 0.27
SMPD4-211ENST00000449159 FANCAO15360 1455 aa16.71■□□□□ 0.27
SMPD4-211ENST00000449159 NCOA2Q15596 1464 aa16.71■□□□□ 0.27
SMPD4-211ENST00000449159 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
SMPD4-211ENST00000449159 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
SMPD4-211ENST00000449159 APLP2Q06481 763 aa16.7■□□□□ 0.26
SMPD4-211ENST00000449159 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
SMPD4-211ENST00000449159 GPATCH8Q9UKJ3 1502 aaKnown RBP16.69■□□□□ 0.26
SMPD4-211ENST00000449159 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
SMPD4-211ENST00000449159 PTPRMP28827 1452 aa16.67■□□□□ 0.26
SMPD4-211ENST00000449159 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
SMPD4-211ENST00000449159 RIMS1Q86UR5 1692 aaKnown RBP16.66■□□□□ 0.26
SMPD4-211ENST00000449159 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
SMPD4-211ENST00000449159 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
SMPD4-211ENST00000449159 ZMYM4Q5VZL5 1548 aa16.63■□□□□ 0.25
SMPD4-211ENST00000449159 ABCC1P33527 1531 aa16.61■□□□□ 0.25
SMPD4-211ENST00000449159 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
SMPD4-211ENST00000449159 FER1L4A9Z1Z3 1794 aa16.59■□□□□ 0.25
SMPD4-211ENST00000449159 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
SMPD4-211ENST00000449159 SIGLEC1Q9BZZ2 1709 aa16.59■□□□□ 0.25
SMPD4-211ENST00000449159 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-211ENST00000449159 ZNF777Q9ULD5 760 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-211ENST00000449159 MYOM3Q5VTT5 1437 aa16.58■□□□□ 0.24
SMPD4-211ENST00000449159 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.24
SMPD4-211ENST00000449159 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.24
SMPD4-211ENST00000449159 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
SMPD4-211ENST00000449159 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
SMPD4-211ENST00000449159 DENND4BO75064 1496 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-211ENST00000449159 RAPGEF3O95398 923 aa16.57■□□□□ 0.24
SMPD4-211ENST00000449159 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
SMPD4-211ENST00000449159 POGZQ7Z3K3 1410 aa16.56■□□□□ 0.24
SMPD4-211ENST00000449159 CAMSAP2Q08AD1 1489 aa16.55■□□□□ 0.24
SMPD4-211ENST00000449159 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-211ENST00000449159 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
SMPD4-211ENST00000449159 KDM5CP41229 1560 aa16.52■□□□□ 0.24
SMPD4-211ENST00000449159 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.23
SMPD4-211ENST00000449159 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
SMPD4-211ENST00000449159 PLEKHH2Q8IVE3 1493 aa16.51■□□□□ 0.23
SMPD4-211ENST00000449159 MIA2Q96PC5 1412 aa16.51■□□□□ 0.23
SMPD4-211ENST00000449159 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-211ENST00000449159 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
SMPD4-211ENST00000449159 KIAA1107Q9UPP5 1409 aa16.5■□□□□ 0.23
SMPD4-211ENST00000449159 MAGI2Q86UL8 1455 aa16.49■□□□□ 0.23
SMPD4-211ENST00000449159 MBD5Q9P267 1494 aa16.49■□□□□ 0.23
SMPD4-211ENST00000449159 HNRNPMP52272 730 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMPD4-211ENST00000449159 AFAP1Q8N556 730 aa16.48■□□□□ 0.23
SMPD4-211ENST00000449159 PREX1Q8TCU6 1659 aa16.48■□□□□ 0.23
SMPD4-211ENST00000449159 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
SMPD4-211ENST00000449159 YEATS2Q9ULM3 1422 aa16.46■□□□□ 0.23
SMPD4-211ENST00000449159 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
SMPD4-211ENST00000449159 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
SMPD4-211ENST00000449159 KIDINS220Q9ULH0 1771 aa16.46■□□□□ 0.22
SMPD4-211ENST00000449159 ABCA6Q8N139 1617 aa16.45■□□□□ 0.22
SMPD4-211ENST00000449159 INO80Q9ULG1 1556 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-211ENST00000449159 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
SMPD4-211ENST00000449159 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
SMPD4-211ENST00000449159 CCDC141Q6ZP82 1450 aa16.43■□□□□ 0.22
SMPD4-211ENST00000449159 MLH3Q9UHC1 1453 aa16.42■□□□□ 0.22
SMPD4-211ENST00000449159 ATP7AQ04656 1500 aa16.42■□□□□ 0.22
SMPD4-211ENST00000449159 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
SMPD4-211ENST00000449159 C9orf84Q5VXU9 1444 aa16.4■□□□□ 0.22
SMPD4-211ENST00000449159 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
SMPD4-211ENST00000449159 ADGBQ8N7X0 1667 aa16.38■□□□□ 0.21
SMPD4-211ENST00000449159 MYT1LQ9UL68 1186 aa16.38■□□□□ 0.21
SMPD4-211ENST00000449159 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
SMPD4-211ENST00000449159 MAST1Q9Y2H9 1570 aa16.37■□□□□ 0.21
SMPD4-211ENST00000449159 ABCC5O15440 1437 aa16.36■□□□□ 0.21
SMPD4-211ENST00000449159 DAPK1P53355 1430 aa16.36■□□□□ 0.21
SMPD4-211ENST00000449159 REREQ9P2R6 1566 aa16.36■□□□□ 0.21
SMPD4-211ENST00000449159 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
SMPD4-211ENST00000449159 ATP10AO60312 1499 aa16.35■□□□□ 0.21
SMPD4-211ENST00000449159 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
SMPD4-211ENST00000449159 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
SMPD4-211ENST00000449159 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
SMPD4-211ENST00000449159 PLXNC1O60486 1568 aa16.32■□□□□ 0.2
SMPD4-211ENST00000449159 C3P01024 1663 aa16.32■□□□□ 0.2
SMPD4-211ENST00000449159 STRCQ7RTU9 1775 aa16.31■□□□□ 0.2
SMPD4-211ENST00000449159 PTPRKQ15262 1439 aa16.3■□□□□ 0.2
SMPD4-211ENST00000449159 TSPY4P0CV99 314 aa16.3■□□□□ 0.2
SMPD4-211ENST00000449159 TSPY10P0CW01 314 aa16.3■□□□□ 0.2
SMPD4-211ENST00000449159 HSPA2P54652 639 aa16.3■□□□□ 0.2
SMPD4-211ENST00000449159 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
SMPD4-211ENST00000449159 A2MP01023 1474 aa16.29■□□□□ 0.2
SMPD4-211ENST00000449159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMPD4-211ENST00000449159 MLECQ14165 292 aa16.28■□□□□ 0.2
SMPD4-211ENST00000449159 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.2
SMPD4-211ENST00000449159 AGLP35573 1532 aa16.26■□□□□ 0.19
SMPD4-211ENST00000449159 MROH2AA6NES4 1674 aa16.25■□□□□ 0.19
SMPD4-211ENST00000449159 ADGRL2O95490 1459 aa16.25■□□□□ 0.19
SMPD4-211ENST00000449159 ITGAEP38570 1179 aa16.25■□□□□ 0.19
SMPD4-211ENST00000449159 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
SMPD4-211ENST00000449159 SETD1BQ9UPS6 1966 aaKnown RBP16.24■□□□□ 0.19
SMPD4-211ENST00000449159 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms