RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
SCN10A-201ENST00000449082 RGS3P49796 1198 aa13.1□□□□□ -0.31
SCN10A-201ENST00000449082 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
SCN10A-201ENST00000449082 NUP155O75694 1391 aa13.09□□□□□ -0.31
SCN10A-201ENST00000449082 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
SCN10A-201ENST00000449082 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
SCN10A-201ENST00000449082 ROCK2O75116 1388 aaKnown RBP13.06□□□□□ -0.32
SCN10A-201ENST00000449082 GLIPR1L2Q4G1C9 344 aa13.06□□□□□ -0.32
SCN10A-201ENST00000449082 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
SCN10A-201ENST00000449082 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
SCN10A-201ENST00000449082 KIF3BO15066 747 aa13.06□□□□□ -0.32
SCN10A-201ENST00000449082 PTMAP06454 111 aaKnown RBP13.06□□□□□ -0.32
SCN10A-201ENST00000449082 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
SCN10A-201ENST00000449082 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
SCN10A-201ENST00000449082 TPRNQ4KMQ1 711 aa13.05□□□□□ -0.32
SCN10A-201ENST00000449082 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
SCN10A-201ENST00000449082 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
SCN10A-201ENST00000449082 EIF3AQ14152 1382 aaKnown RBP13.05□□□□□ -0.32
SCN10A-201ENST00000449082 CALD1Q05682 793 aaKnown RBP13.05□□□□□ -0.32
SCN10A-201ENST00000449082 KANK4Q5T7N3 995 aaPredicted RBP13.05□□□□□ -0.32
SCN10A-201ENST00000449082 FOXD1Q16676 465 aa13.05□□□□□ -0.32
SCN10A-201ENST00000449082 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
SCN10A-201ENST00000449082 NAP1L2Q9ULW6 460 aaPredicted RBP13.04□□□□□ -0.32
SCN10A-201ENST00000449082 HSP90AB1P08238 724 aaKnown RBP13.04□□□□□ -0.32
SCN10A-201ENST00000449082 TAOK2Q9UL54 1235 aa13.04□□□□□ -0.32
SCN10A-201ENST00000449082 SPAG9O60271 1321 aaKnown RBP13.03□□□□□ -0.32
SCN10A-201ENST00000449082 CFAP44Q96MT7 982 aa13.02□□□□□ -0.32
SCN10A-201ENST00000449082 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.32
SCN10A-201ENST00000449082 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.32
SCN10A-201ENST00000449082 CCER2I3L3R5 266 aa13.02□□□□□ -0.33
SCN10A-201ENST00000449082 HNRNPMP52272 730 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCN10A-201ENST00000449082 MCCP23508 829 aa13.01□□□□□ -0.33
SCN10A-201ENST00000449082 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
SCN10A-201ENST00000449082 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
SCN10A-201ENST00000449082 WASHC2CQ9Y4E1 1318 aa13.01□□□□□ -0.33
SCN10A-201ENST00000449082 U2AF1L5P0DN76 240 aaPredicted RBP13□□□□□ -0.33
SCN10A-201ENST00000449082 U2AF1Q01081 240 aaKnown RBP eCLIP13□□□□□ -0.33
SCN10A-201ENST00000449082 JPH4Q96JJ6 628 aa13□□□□□ -0.33
SCN10A-201ENST00000449082 RALBP1Q15311 655 aa12.99□□□□□ -0.33
SCN10A-201ENST00000449082 TERF2IPQ9NYB0 399 aa12.99□□□□□ -0.33
SCN10A-201ENST00000449082 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
SCN10A-201ENST00000449082 GOLGA6L6A8MZA4 724 aa12.97□□□□□ -0.33
SCN10A-201ENST00000449082 WIZO95785 1651 aa12.97□□□□□ -0.33
SCN10A-201ENST00000449082 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
SCN10A-201ENST00000449082 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
SCN10A-201ENST00000449082 HSCBQ8IWL3 235 aa12.96□□□□□ -0.33
SCN10A-201ENST00000449082 GOLGA6L4A6NEF3 574 aa12.96□□□□□ -0.34
SCN10A-201ENST00000449082 NGDNQ8NEJ9 315 aaKnown RBP12.96□□□□□ -0.34
SCN10A-201ENST00000449082 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
SCN10A-201ENST00000449082 DNTTIP2Q5QJE6 756 aaKnown RBP12.95□□□□□ -0.34
SCN10A-201ENST00000449082 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
SCN10A-201ENST00000449082 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
SCN10A-201ENST00000449082 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
SCN10A-201ENST00000449082 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
SCN10A-201ENST00000449082 STK31Q9BXU1 1019 aa12.93□□□□□ -0.34
SCN10A-201ENST00000449082 KIAA1211Q6ZU35 1233 aa12.93□□□□□ -0.34
SCN10A-201ENST00000449082 NRDCO43847 1150 aa12.92□□□□□ -0.34
SCN10A-201ENST00000449082 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
SCN10A-201ENST00000449082 NUTM2DQ5VT03 806 aaPredicted RBP12.92□□□□□ -0.34
SCN10A-201ENST00000449082 HDAC5Q9UQL6 1122 aa12.91□□□□□ -0.34
SCN10A-201ENST00000449082 APBB1O00213 710 aa12.9□□□□□ -0.34
SCN10A-201ENST00000449082 AMPHP49418 695 aa12.9□□□□□ -0.34
SCN10A-201ENST00000449082 ITPRIPQ8IWB1 547 aa12.9□□□□□ -0.34
SCN10A-201ENST00000449082 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
SCN10A-201ENST00000449082 RWDD1Q9H446 243 aaPredicted RBP12.89□□□□□ -0.35
SCN10A-201ENST00000449082 LMOD3Q0VAK6 560 aa12.89□□□□□ -0.35
SCN10A-201ENST00000449082 PTPRGP23470 1445 aa12.89□□□□□ -0.35
SCN10A-201ENST00000449082 GNL2Q13823 731 aaKnown RBP12.89□□□□□ -0.35
SCN10A-201ENST00000449082 NOP58Q9Y2X3 529 aaKnown RBP12.88□□□□□ -0.35
SCN10A-201ENST00000449082 UACAQ9BZF9 1416 aa12.88□□□□□ -0.35
SCN10A-201ENST00000449082 L3MBTL2Q969R5 705 aa12.88□□□□□ -0.35
SCN10A-201ENST00000449082 RCAN3Q9UKA8 241 aa12.88□□□□□ -0.35
SCN10A-201ENST00000449082 GORABQ5T7V8 394 aa12.87□□□□□ -0.35
SCN10A-201ENST00000449082 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
SCN10A-201ENST00000449082 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
SCN10A-201ENST00000449082 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
SCN10A-201ENST00000449082 GPATCH3Q96I76 525 aa12.86□□□□□ -0.35
SCN10A-201ENST00000449082 TRAK1Q9UPV9 953 aa12.86□□□□□ -0.35
SCN10A-201ENST00000449082 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
SCN10A-201ENST00000449082 CYB5RLQ6IPT4 315 aa12.86□□□□□ -0.35
SCN10A-201ENST00000449082 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
SCN10A-201ENST00000449082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCN10A-201ENST00000449082 ERICH6BQ5W0A0 696 aa12.85□□□□□ -0.35
SCN10A-201ENST00000449082 HMMRO75330 724 aa12.85□□□□□ -0.35
SCN10A-201ENST00000449082 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
SCN10A-201ENST00000449082 CLSTN1O94985 981 aa12.85□□□□□ -0.35
SCN10A-201ENST00000449082 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
SCN10A-201ENST00000449082 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
SCN10A-201ENST00000449082 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
SCN10A-201ENST00000449082 NUTM2FA1L443 756 aa12.84□□□□□ -0.35
SCN10A-201ENST00000449082 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
SCN10A-201ENST00000449082 G3V3G9 751 aa12.82□□□□□ -0.36
SCN10A-201ENST00000449082 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
SCN10A-201ENST00000449082 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
SCN10A-201ENST00000449082 SLC4A10Q6U841 1118 aa12.8□□□□□ -0.36
SCN10A-201ENST00000449082 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
SCN10A-201ENST00000449082 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
SCN10A-201ENST00000449082 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
SCN10A-201ENST00000449082 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
SCN10A-201ENST00000449082 COG3Q96JB2 828 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms