RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 EPRSP07814 1512 aaKnown RBP10.48□□□□□ -0.73
RFC4-209ENST00000448497 CCNB3Q8WWL7 1395 aa10.48□□□□□ -0.73
RFC4-209ENST00000448497 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
RFC4-209ENST00000448497 JPH4Q96JJ6 628 aa10.47□□□□□ -0.73
RFC4-209ENST00000448497 TTBK1Q5TCY1 1321 aaPredicted RBP10.47□□□□□ -0.73
RFC4-209ENST00000448497 SPDYE1Q8NFV5 336 aaPredicted RBP10.45□□□□□ -0.74
RFC4-209ENST00000448497 ABCA8O94911 1581 aa10.44□□□□□ -0.74
RFC4-209ENST00000448497 NUP153P49790 1475 aaKnown RBP10.44□□□□□ -0.74
RFC4-209ENST00000448497 MTUS2Q5JR59 1369 aa10.44□□□□□ -0.74
RFC4-209ENST00000448497 PHLDB1Q86UU1 1377 aa10.44□□□□□ -0.74
RFC4-209ENST00000448497 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
RFC4-209ENST00000448497 MAGI3Q5TCQ9 1506 aa10.43□□□□□ -0.74
RFC4-209ENST00000448497 CLASP1Q7Z460 1538 aa10.43□□□□□ -0.74
RFC4-209ENST00000448497 NCOA2Q15596 1464 aa10.42□□□□□ -0.74
RFC4-209ENST00000448497 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
RFC4-209ENST00000448497 MYOM3Q5VTT5 1437 aa10.41□□□□□ -0.74
RFC4-209ENST00000448497 FGD6Q6ZV73 1430 aa10.41□□□□□ -0.74
RFC4-209ENST00000448497 PRG4Q92954 1404 aaPredicted RBP10.4□□□□□ -0.75
RFC4-209ENST00000448497 CDK13Q14004 1512 aaKnown RBP10.39□□□□□ -0.75
RFC4-209ENST00000448497 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
RFC4-209ENST00000448497 TCOF1Q13428 1488 aaKnown RBP10.38□□□□□ -0.75
RFC4-209ENST00000448497 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
RFC4-209ENST00000448497 CLSPNQ9HAW4 1339 aa10.37□□□□□ -0.75
RFC4-209ENST00000448497 PLB1Q6P1J6 1458 aa10.37□□□□□ -0.75
RFC4-209ENST00000448497 PTPN23Q9H3S7 1636 aa10.36□□□□□ -0.75
RFC4-209ENST00000448497 CDK11AQ9UQ88 783 aaPredicted RBP10.36□□□□□ -0.75
RFC4-209ENST00000448497 ITSN2Q9NZM3 1697 aa10.35□□□□□ -0.75
RFC4-209ENST00000448497 PTPRGP23470 1445 aa10.35□□□□□ -0.75
RFC4-209ENST00000448497 TROQ12816 1431 aaPredicted RBP10.35□□□□□ -0.75
RFC4-209ENST00000448497 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
RFC4-209ENST00000448497 CCER1Q8TC90 406 aaPredicted RBP10.35□□□□□ -0.75
RFC4-209ENST00000448497 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
RFC4-209ENST00000448497 ATP10BO94823 1461 aa10.33□□□□□ -0.76
RFC4-209ENST00000448497 UHRF1BP1LA0JNW5 1464 aa10.32□□□□□ -0.76
RFC4-209ENST00000448497 AKNAQ7Z591 1439 aa10.32□□□□□ -0.76
RFC4-209ENST00000448497 UACAQ9BZF9 1416 aa10.32□□□□□ -0.76
RFC4-209ENST00000448497 SETD5Q9C0A6 1442 aa10.32□□□□□ -0.76
RFC4-209ENST00000448497 PITPNM1O00562 1244 aa10.31□□□□□ -0.76
RFC4-209ENST00000448497 ABCC2Q92887 1545 aa10.31□□□□□ -0.76
RFC4-209ENST00000448497 ERCC6L2Q5T890 1561 aa10.31□□□□□ -0.76
RFC4-209ENST00000448497 KIF14Q15058 1648 aa10.3□□□□□ -0.76
RFC4-209ENST00000448497 PLEKHG5O94827 1062 aa10.29□□□□□ -0.76
RFC4-209ENST00000448497 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
RFC4-209ENST00000448497 CDC42BPAQ5VT25 1732 aa10.29□□□□□ -0.76
RFC4-209ENST00000448497 DNMT1P26358 1616 aaKnown RBP10.29□□□□□ -0.76
RFC4-209ENST00000448497 GCC2Q8IWJ2 1684 aa10.28□□□□□ -0.76
RFC4-209ENST00000448497 DHX57Q6P158 1386 aaKnown RBP10.28□□□□□ -0.76
RFC4-209ENST00000448497 HFM1A2PYH4 1435 aa10.28□□□□□ -0.76
RFC4-209ENST00000448497 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
RFC4-209ENST00000448497 ABCC10Q5T3U5 1492 aa10.28□□□□□ -0.76
RFC4-209ENST00000448497 GPATCH8Q9UKJ3 1502 aaKnown RBP10.27□□□□□ -0.77
RFC4-209ENST00000448497 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
RFC4-209ENST00000448497 KDM5BQ9UGL1 1544 aa10.26□□□□□ -0.77
RFC4-209ENST00000448497 ACIN1Q9UKV3 1341 aaKnown RBP10.26□□□□□ -0.77
RFC4-209ENST00000448497 PTPRKQ15262 1439 aa10.25□□□□□ -0.77
RFC4-209ENST00000448497 PLEKHD1A6NEE1 506 aa10.25□□□□□ -0.77
RFC4-209ENST00000448497 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
RFC4-209ENST00000448497 CROCC2H7BZ55 1655 aa10.25□□□□□ -0.77
RFC4-209ENST00000448497 MIER1Q8N108 512 aa10.24□□□□□ -0.77
RFC4-209ENST00000448497 ROCK1Q13464 1354 aa10.24□□□□□ -0.77
RFC4-209ENST00000448497 NAIPQ13075 1403 aa10.24□□□□□ -0.77
RFC4-209ENST00000448497 ZCCHC11Q5TAX3 1644 aaKnown RBP10.23□□□□□ -0.77
RFC4-209ENST00000448497 PREX2Q70Z35 1606 aa10.23□□□□□ -0.77
RFC4-209ENST00000448497 ADGBQ8N7X0 1667 aa10.23□□□□□ -0.77
RFC4-209ENST00000448497 ZBTB47Q9UFB7 747 aaPredicted RBP10.23□□□□□ -0.77
RFC4-209ENST00000448497 DAPK1P53355 1430 aa10.22□□□□□ -0.77
RFC4-209ENST00000448497 CAMSAP2Q08AD1 1489 aa10.22□□□□□ -0.77
RFC4-209ENST00000448497 CDC42BPBQ9Y5S2 1711 aa10.21□□□□□ -0.77
RFC4-209ENST00000448497 ITGAEP38570 1179 aa10.21□□□□□ -0.77
RFC4-209ENST00000448497 MAPKBP1O60336 1514 aa10.21□□□□□ -0.78
RFC4-209ENST00000448497 ARHGEF5Q12774 1597 aa10.21□□□□□ -0.78
RFC4-209ENST00000448497 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
RFC4-209ENST00000448497 CHRDL2Q6WN34 429 aa10.2□□□□□ -0.78
RFC4-209ENST00000448497 MYO5CQ9NQX4 1742 aa10.2□□□□□ -0.78
RFC4-209ENST00000448497 SHANK2Q9UPX8 1470 aa10.2□□□□□ -0.78
RFC4-209ENST00000448497 ABCC5O15440 1437 aa10.19□□□□□ -0.78
RFC4-209ENST00000448497 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
RFC4-209ENST00000448497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.18□□□□□ -0.78
RFC4-209ENST00000448497 ARAP3Q8WWN8 1544 aa10.18□□□□□ -0.78
RFC4-209ENST00000448497 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
RFC4-209ENST00000448497 CFDP1Q9UEE9 299 aaPredicted RBP10.18□□□□□ -0.78
RFC4-209ENST00000448497 TTC37Q6PGP7 1564 aa10.17□□□□□ -0.78
RFC4-209ENST00000448497 SAMD9LQ8IVG5 1584 aa10.15□□□□□ -0.78
RFC4-209ENST00000448497 MAST1Q9Y2H9 1570 aa10.15□□□□□ -0.78
RFC4-209ENST00000448497 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
RFC4-209ENST00000448497 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
RFC4-209ENST00000448497 PLEKHH2Q8IVE3 1493 aa10.15□□□□□ -0.78
RFC4-209ENST00000448497 AMER1Q5JTC6 1135 aaPredicted RBP10.14□□□□□ -0.79
RFC4-209ENST00000448497 RSPH4AQ5TD94 716 aa10.14□□□□□ -0.79
RFC4-209ENST00000448497 CREBZFQ9NS37 354 aa10.14□□□□□ -0.79
RFC4-209ENST00000448497 MBD5Q9P267 1494 aa10.14□□□□□ -0.79
RFC4-209ENST00000448497 NCOA1Q15788 1441 aa10.14□□□□□ -0.79
RFC4-209ENST00000448497 KIAA1107Q9UPP5 1409 aa10.14□□□□□ -0.79
RFC4-209ENST00000448497 ZNF644Q9H582 1327 aaPredicted RBP10.13□□□□□ -0.79
RFC4-209ENST00000448497 FXR2P51116 673 aaKnown RBP eCLIP10.13□□□□□ -0.79
RFC4-209ENST00000448497 ABCA9Q8IUA7 1624 aa10.13□□□□□ -0.79
RFC4-209ENST00000448497 WDR7Q9Y4E6 1490 aa10.12□□□□□ -0.79
RFC4-209ENST00000448497 KDM6BO15054 1643 aa10.12□□□□□ -0.79
RFC4-209ENST00000448497 PLCH2O75038 1416 aa10.12□□□□□ -0.79
RFC4-209ENST00000448497 CCDC141Q6ZP82 1450 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms