RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 RIMBP2O15034 1052 aa7.69□□□□□ -1.18
PTPN12-208ENST00000447995 NLRP6P59044 892 aa7.68□□□□□ -1.18
PTPN12-208ENST00000447995 ZSWIM6Q9HCJ5 1215 aa7.68□□□□□ -1.18
PTPN12-208ENST00000447995 ERBB3P21860 1342 aa7.68□□□□□ -1.18
PTPN12-208ENST00000447995 MFRPQ9BY79 579 aa7.67□□□□□ -1.18
PTPN12-208ENST00000447995 VARS2Q5ST30 1063 aaKnown RBP7.66□□□□□ -1.18
PTPN12-208ENST00000447995 TAOK2Q9UL54 1235 aa7.66□□□□□ -1.18
PTPN12-208ENST00000447995 STK24Q9Y6E0 443 aa7.66□□□□□ -1.18
PTPN12-208ENST00000447995 GPR153Q6NV75 609 aa7.65□□□□□ -1.18
PTPN12-208ENST00000447995 ECM2O94769 699 aaPredicted RBP7.64□□□□□ -1.19
PTPN12-208ENST00000447995 STK25O00506 426 aa7.63□□□□□ -1.19
PTPN12-208ENST00000447995 PKD2Q13563 968 aa7.62□□□□□ -1.19
PTPN12-208ENST00000447995 KIF3CO14782 793 aa7.61□□□□□ -1.19
PTPN12-208ENST00000447995 RGL2O15211 777 aa7.61□□□□□ -1.19
PTPN12-208ENST00000447995 ZNF687Q8N1G0 1237 aa7.6□□□□□ -1.19
PTPN12-208ENST00000447995 ARSIQ5FYB1 569 aa7.59□□□□□ -1.19
PTPN12-208ENST00000447995 KHSRPQ92945 711 aaKnown RBP eCLIP7.59□□□□□ -1.191e-8■■■■□ 19.9
PTPN12-208ENST00000447995 C2orf72A6NCS6 295 aa7.58□□□□□ -1.2
PTPN12-208ENST00000447995 ZNF316A6NFI3 1004 aaPredicted RBP7.56□□□□□ -1.2
PTPN12-208ENST00000447995 RNF166Q96A37 237 aaPredicted RBP7.56□□□□□ -1.2
PTPN12-208ENST00000447995 NUDT7P0C024 238 aa7.52□□□□□ -1.21
PTPN12-208ENST00000447995 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
PTPN12-208ENST00000447995 PPP1R37O75864 691 aa7.51□□□□□ -1.21
PTPN12-208ENST00000447995 SLC34A2O95436 690 aa7.51□□□□□ -1.21
PTPN12-208ENST00000447995 PCDHGA4Q9Y5G9 962 aa7.5□□□□□ -1.21
PTPN12-208ENST00000447995 PTGER2P43116 358 aa7.49□□□□□ -1.21
PTPN12-208ENST00000447995 TMC2Q8TDI7 906 aa7.49□□□□□ -1.21
PTPN12-208ENST00000447995 LSM11P83369 360 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTPN12-208ENST00000447995 LHX6Q9UPM6 363 aa7.48□□□□□ -1.21
PTPN12-208ENST00000447995 POTEEQ6S8J3 1075 aa7.47□□□□□ -1.21
PTPN12-208ENST00000447995 PBX2P40425 430 aa7.46□□□□□ -1.22
PTPN12-208ENST00000447995 HS6ST3Q8IZP7 471 aa7.46□□□□□ -1.22
PTPN12-208ENST00000447995 ANKRD13DQ6ZTN6 518 aa7.45□□□□□ -1.22
PTPN12-208ENST00000447995 KDM4FA0A1W2PPD8 638 aa7.42□□□□□ -1.22
PTPN12-208ENST00000447995 AXIN2Q9Y2T1 843 aa7.42□□□□□ -1.22
PTPN12-208ENST00000447995 PTCD2Q8WV60 388 aaKnown RBP7.41□□□□□ -1.22
PTPN12-208ENST00000447995 FOXK1P85037 733 aa7.4□□□□□ -1.22
PTPN12-208ENST00000447995 PLPP6Q8IY26 295 aa7.39□□□□□ -1.23
PTPN12-208ENST00000447995 PSDA5PKW4 1024 aaPredicted RBP7.38□□□□□ -1.23
PTPN12-208ENST00000447995 DSG2Q14126 1118 aa7.38□□□□□ -1.23
PTPN12-208ENST00000447995 DNAJC5Q9H3Z4 198 aa7.38□□□□□ -1.23
PTPN12-208ENST00000447995 GPHNQ9NQX3 736 aaPredicted RBP7.38□□□□□ -1.23
PTPN12-208ENST00000447995 NKX1-1Q15270 411 aaPredicted RBP7.37□□□□□ -1.23
PTPN12-208ENST00000447995 CCDC180Q9P1Z9 1646 aa7.37□□□□□ -1.23
PTPN12-208ENST00000447995 ARHGAP33O14559 1287 aa7.36□□□□□ -1.23
PTPN12-208ENST00000447995 CHGAP10645 457 aaKnown RBP7.36□□□□□ -1.23
PTPN12-208ENST00000447995 ADGRD1Q6QNK2 874 aa7.36□□□□□ -1.23
PTPN12-208ENST00000447995 DMRTA1Q5VZB9 504 aa7.34□□□□□ -1.23
PTPN12-208ENST00000447995 PSEN2P49810 448 aa7.33□□□□□ -1.24
PTPN12-208ENST00000447995 TK2O00142 265 aa7.32□□□□□ -1.24
PTPN12-208ENST00000447995 PPP4R3BQ5MIZ7 849 aa7.32□□□□□ -1.24
PTPN12-208ENST00000447995 CRISPLD2Q9H0B8 497 aa7.32□□□□□ -1.24
PTPN12-208ENST00000447995 HRO43593 1189 aa7.31□□□□□ -1.24
PTPN12-208ENST00000447995 OXER1Q8TDS5 423 aa7.31□□□□□ -1.24
PTPN12-208ENST00000447995 TBC1D12O60347 775 aa7.29□□□□□ -1.24
PTPN12-208ENST00000447995 PPP1R15BQ5SWA1 713 aa7.28□□□□□ -1.24
PTPN12-208ENST00000447995 UPF1Q92900 1129 aaKnown RBP eCLIP7.28□□□□□ -1.24
PTPN12-208ENST00000447995 RYDENQ9NUL5 291 aaKnown RBP7.28□□□□□ -1.24
PTPN12-208ENST00000447995 HCSTQ9UBK5 93 aa7.28□□□□□ -1.24
PTPN12-208ENST00000447995 NCKAP5LQ9HCH0 1330 aa7.27□□□□□ -1.24
PTPN12-208ENST00000447995 KCNK17Q96T54 332 aa7.27□□□□□ -1.25
PTPN12-208ENST00000447995 PLA2G2EQ9NZK7 142 aa7.26□□□□□ -1.25
PTPN12-208ENST00000447995 ZNF454Q8N9F8 522 aa7.25□□□□□ -1.25
PTPN12-208ENST00000447995 GTPBP6O43824 516 aaPredicted RBP7.23□□□□□ -1.25
PTPN12-208ENST00000447995 FOSBP53539 338 aa7.23□□□□□ -1.25
PTPN12-208ENST00000447995 BCL2L12Q9HB09 334 aa7.23□□□□□ -1.25
PTPN12-208ENST00000447995 VPS9D1Q9Y2B5 631 aa7.23□□□□□ -1.25
PTPN12-208ENST00000447995 KCTD12Q96CX2 325 aaKnown RBP7.22□□□□□ -1.25
PTPN12-208ENST00000447995 JPH4Q96JJ6 628 aa7.21□□□□□ -1.26
PTPN12-208ENST00000447995 KCNH8Q96L42 1107 aa7.21□□□□□ -1.26
PTPN12-208ENST00000447995 ZCCHC6Q5VYS8 1495 aaKnown RBP7.21□□□□□ -1.26
PTPN12-208ENST00000447995 PDE4AP27815 886 aa7.2□□□□□ -1.26
PTPN12-208ENST00000447995 MFSD10Q14728 455 aa7.2□□□□□ -1.26
PTPN12-208ENST00000447995 SLC4A5Q9BY07 1137 aa7.2□□□□□ -1.26
PTPN12-208ENST00000447995 ANO8Q9HCE9 1232 aaPredicted RBP7.19□□□□□ -1.26
PTPN12-208ENST00000447995 EVI5O60447 810 aa7.18□□□□□ -1.26
PTPN12-208ENST00000447995 DDX27Q96GQ7 796 aaKnown RBP7.18□□□□□ -1.26
PTPN12-208ENST00000447995 ZBED2Q9BTP6 218 aa7.18□□□□□ -1.26
PTPN12-208ENST00000447995 PTPREP23469 700 aa7.17□□□□□ -1.26
PTPN12-208ENST00000447995 ADAM33Q9BZ11 813 aa7.17□□□□□ -1.26
PTPN12-208ENST00000447995 BHMG1C9JSJ3 638 aaPredicted RBP7.16□□□□□ -1.26
PTPN12-208ENST00000447995 STAC3Q96MF2 364 aa7.16□□□□□ -1.26
PTPN12-208ENST00000447995 LARP6Q9BRS8 491 aaKnown RBP7.16□□□□□ -1.26
PTPN12-208ENST00000447995 EMILIN3Q9NT22 766 aa7.16□□□□□ -1.26
PTPN12-208ENST00000447995 ZDHHC16Q969W1 377 aa7.15□□□□□ -1.26
PTPN12-208ENST00000447995 THSD4Q6ZMP0 1018 aa7.14□□□□□ -1.27
PTPN12-208ENST00000447995 CADPS2Q86UW7 1296 aa7.14□□□□□ -1.27
PTPN12-208ENST00000447995 PTPN5P54829 565 aa7.12□□□□□ -1.27
PTPN12-208ENST00000447995 PPP1R3GB7ZBB8 358 aa7.11□□□□□ -1.27
PTPN12-208ENST00000447995 MAP3K9P80192 1104 aa7.11□□□□□ -1.27
PTPN12-208ENST00000447995 PCDHGA10Q9Y5H3 936 aa7.11□□□□□ -1.27
PTPN12-208ENST00000447995 DCAF8L2P0C7V8 631 aa7.1□□□□□ -1.27
PTPN12-208ENST00000447995 MRPL50Q8N5N7 158 aaKnown RBP7.1□□□□□ -1.27
PTPN12-208ENST00000447995 IFFO2Q5TF58 517 aa7.09□□□□□ -1.27
PTPN12-208ENST00000447995 WNT2BQ93097 391 aa7.09□□□□□ -1.27
PTPN12-208ENST00000447995 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
PTPN12-208ENST00000447995 DCAF1Q9Y4B6 1507 aa7.09□□□□□ -1.27
PTPN12-208ENST00000447995 COL9A1P20849 921 aa7.08□□□□□ -1.28
PTPN12-208ENST00000447995 PROX2Q3B8N5 592 aa7.08□□□□□ -1.28
PTPN12-208ENST00000447995 SHROOM4Q9ULL8 1493 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms