RNA–Protein interactions for RNA: ENST00000447698.5

STRADB-204, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 4

Gene STRADB, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-204ENST00000447698 CDC42BPBQ9Y5S2 1711 aa37.19■■■■□ 3.54
STRADB-204ENST00000447698 VPS8Q8N3P4 1428 aa37.18■■■■□ 3.54
STRADB-204ENST00000447698 MTUS2Q5JR59 1369 aa37.17■■■■□ 3.54
STRADB-204ENST00000447698 PREX2Q70Z35 1606 aa37.14■■■■□ 3.54
STRADB-204ENST00000447698 CDC42BPAQ5VT25 1732 aa37.13■■■■□ 3.54
STRADB-204ENST00000447698 POGZQ7Z3K3 1410 aa37.1■■■■□ 3.53
STRADB-204ENST00000447698 ZMYM4Q5VZL5 1548 aa37.05■■■■□ 3.52
STRADB-204ENST00000447698 EHBP1L1Q8N3D4 1523 aa37.05■■■■□ 3.52
STRADB-204ENST00000447698 GPATCH8Q9UKJ3 1502 aaKnown RBP37.05■■■■□ 3.52
STRADB-204ENST00000447698 ARHGEF40Q8TER5 1519 aa37.01■■■■□ 3.52
STRADB-204ENST00000447698 TIAM1Q13009 1591 aa37.01■■■■□ 3.52
STRADB-204ENST00000447698 CCNB3Q8WWL7 1395 aa37.01■■■■□ 3.51
STRADB-204ENST00000447698 YEATS2Q9ULM3 1422 aa37■■■■□ 3.51
STRADB-204ENST00000447698 AFAP1Q8N556 730 aa36.99■■■■□ 3.51
STRADB-204ENST00000447698 ZNF777Q9ULD5 760 aaPredicted RBP36.99■■■■□ 3.51
STRADB-204ENST00000447698 ZFYVE16Q7Z3T8 1539 aa36.97■■■■□ 3.51
STRADB-204ENST00000447698 ABCC1P33527 1531 aa36.96■■■■□ 3.51
STRADB-204ENST00000447698 ARHGEF12Q9NZN5 1544 aa36.96■■■■□ 3.51
STRADB-204ENST00000447698 ZNF518AQ6AHZ1 1483 aa36.95■■■■□ 3.51
STRADB-204ENST00000447698 MAGI2Q86UL8 1455 aa36.95■■■■□ 3.51
STRADB-204ENST00000447698 CFDP1Q9UEE9 299 aaPredicted RBP36.94■■■■□ 3.5
STRADB-204ENST00000447698 ARID4BQ4LE39 1312 aaPredicted RBP36.92■■■■□ 3.5
STRADB-204ENST00000447698 SAMD9LQ8IVG5 1584 aa36.91■■■■□ 3.5
STRADB-204ENST00000447698 ITSN2Q9NZM3 1697 aa36.91■■■■□ 3.5
STRADB-204ENST00000447698 TRAPPC8Q9Y2L5 1435 aa36.91■■■■□ 3.5
STRADB-204ENST00000447698 KDM5CP41229 1560 aa36.89■■■■□ 3.5
STRADB-204ENST00000447698 SUPT6HQ7KZ85 1726 aaKnown RBP36.88■■■■□ 3.49
STRADB-204ENST00000447698 NCOA2Q15596 1464 aa36.87■■■■□ 3.49
STRADB-204ENST00000447698 LRRC9Q6ZRR7 1453 aa36.87■■■■□ 3.49
STRADB-204ENST00000447698 KANK4Q5T7N3 995 aaPredicted RBP36.85■■■■□ 3.49
STRADB-204ENST00000447698 MYT1LQ9UL68 1186 aa36.85■■■■□ 3.49
STRADB-204ENST00000447698 MAP3K1Q13233 1512 aa36.84■■■■□ 3.49
STRADB-204ENST00000447698 SIGLEC1Q9BZZ2 1709 aa36.83■■■■□ 3.49
STRADB-204ENST00000447698 HNRNPMP52272 730 aaKnown RBP eCLIP36.83■■■■□ 3.49
STRADB-204ENST00000447698 SYCP2Q9BX26 1530 aa36.83■■■■□ 3.49
STRADB-204ENST00000447698 HECW2Q9P2P5 1572 aa36.81■■■■□ 3.48
STRADB-204ENST00000447698 BCORL1Q5H9F3 1711 aa36.8■■■■□ 3.48
STRADB-204ENST00000447698 ATP10AO60312 1499 aa36.8■■■■□ 3.48
STRADB-204ENST00000447698 ZNF644Q9H582 1327 aaPredicted RBP36.8■■■■□ 3.48
STRADB-204ENST00000447698 ADAMTSL3P82987 1691 aa36.79■■■■□ 3.48
STRADB-204ENST00000447698 MLH3Q9UHC1 1453 aa36.76■■■■□ 3.48
STRADB-204ENST00000447698 KIAA1107Q9UPP5 1409 aa36.76■■■■□ 3.47
STRADB-204ENST00000447698 PLEKHH2Q8IVE3 1493 aa36.75■■■■□ 3.47
STRADB-204ENST00000447698 APLP2Q06481 763 aa36.74■■■■□ 3.47
STRADB-204ENST00000447698 C9orf84Q5VXU9 1444 aa36.74■■■■□ 3.47
STRADB-204ENST00000447698 DIP2CQ9Y2E4 1556 aa36.72■■■■□ 3.47
STRADB-204ENST00000447698 ABCA6Q8N139 1617 aa36.7■■■■□ 3.47
STRADB-204ENST00000447698 KIDINS220Q9ULH0 1771 aa36.7■■■■□ 3.47
STRADB-204ENST00000447698 MLECQ14165 292 aa36.69■■■■□ 3.46
STRADB-204ENST00000447698 MADDQ8WXG6 1647 aa36.68■■■■□ 3.46
STRADB-204ENST00000447698 SPAG9O60271 1321 aaKnown RBP36.66■■■■□ 3.46
STRADB-204ENST00000447698 MBD5Q9P267 1494 aa36.63■■■■□ 3.45
STRADB-204ENST00000447698 PTPRMP28827 1452 aa36.62■■■■□ 3.45
STRADB-204ENST00000447698 CAMSAP2Q08AD1 1489 aa36.61■■■■□ 3.45
STRADB-204ENST00000447698 RIMS1Q86UR5 1692 aaKnown RBP36.58■■■■□ 3.45
STRADB-204ENST00000447698 REREQ9P2R6 1566 aa36.57■■■■□ 3.45
STRADB-204ENST00000447698 ATP7AQ04656 1500 aa36.57■■■■□ 3.44
STRADB-204ENST00000447698 INO80Q9ULG1 1556 aaPredicted RBP36.55■■■■□ 3.44
STRADB-204ENST00000447698 MYOM3Q5VTT5 1437 aa36.53■■■■□ 3.44
STRADB-204ENST00000447698 FER1L4A9Z1Z3 1794 aa36.5■■■■□ 3.43
STRADB-204ENST00000447698 CCDC141Q6ZP82 1450 aa36.48■■■■□ 3.43
STRADB-204ENST00000447698 AGLP35573 1532 aa36.48■■■■□ 3.43
STRADB-204ENST00000447698 MIA2Q96PC5 1412 aa36.46■■■■□ 3.43
STRADB-204ENST00000447698 PLPPR3Q6T4P5 718 aa36.46■■■■□ 3.43
STRADB-204ENST00000447698 RSPH4AQ5TD94 716 aa36.44■■■■□ 3.42
STRADB-204ENST00000447698 ARHGEF5Q12774 1597 aa36.42■■■■□ 3.42
STRADB-204ENST00000447698 RTEL1-TNFRSF6BF6WH68 1400 aa36.42■■■■□ 3.42
STRADB-204ENST00000447698 A2MP01023 1474 aa36.41■■■■□ 3.42
STRADB-204ENST00000447698 ADGBQ8N7X0 1667 aa36.37■■■■□ 3.41
STRADB-204ENST00000447698 PLXNC1O60486 1568 aa36.36■■■■□ 3.41
STRADB-204ENST00000447698 TSPY4P0CV99 314 aa36.34■■■■□ 3.41
STRADB-204ENST00000447698 TSPY10P0CW01 314 aa36.34■■■■□ 3.41
STRADB-204ENST00000447698 PTPN23Q9H3S7 1636 aa36.32■■■■□ 3.4
STRADB-204ENST00000447698 CEBPAP49715 358 aaPredicted RBP36.3■■■■□ 3.4
STRADB-204ENST00000447698 FGD6Q6ZV73 1430 aa36.3■■■■□ 3.4
STRADB-204ENST00000447698 ESF1Q9H501 851 aaKnown RBP36.27■■■■□ 3.4
STRADB-204ENST00000447698 DHX29Q7Z478 1369 aaKnown RBP36.27■■■■□ 3.4
STRADB-204ENST00000447698 GGT6Q6P531 493 aa36.23■■■■□ 3.39
STRADB-204ENST00000447698 MAST1Q9Y2H9 1570 aa36.22■■■■□ 3.39
STRADB-204ENST00000447698 TCOF1Q13428 1488 aaKnown RBP36.21■■■■□ 3.39
STRADB-204ENST00000447698 PPARGC1BQ86YN6 1023 aaKnown RBP36.19■■■■□ 3.38
STRADB-204ENST00000447698 ABCC5O15440 1437 aa36.18■■■■□ 3.38
STRADB-204ENST00000447698 C3P01024 1663 aa36.17■■■■□ 3.38
STRADB-204ENST00000447698 CNTLNQ9NXG0 1405 aa36.17■■■■□ 3.38
STRADB-204ENST00000447698 KIF3BO15066 747 aa36.16■■■■□ 3.38
STRADB-204ENST00000447698 LMTK3Q96Q04 1460 aa36.16■■■■□ 3.38
STRADB-204ENST00000447698 DAPK1P53355 1430 aa36.13■■■■□ 3.37
STRADB-204ENST00000447698 CROCC2H7BZ55 1655 aa36.13■■■■□ 3.37
STRADB-204ENST00000447698 DNMT1P26358 1616 aaKnown RBP36.12■■■■□ 3.37
STRADB-204ENST00000447698 CLTCQ00610 1675 aaKnown RBP36.12■■■■□ 3.37
STRADB-204ENST00000447698 FAM50AQ14320 339 aaKnown RBP36.1■■■■□ 3.37
STRADB-204ENST00000447698 SETD1BQ9UPS6 1966 aaKnown RBP36.08■■■■□ 3.37
STRADB-204ENST00000447698 MROH2AA6NES4 1674 aa36.08■■■■□ 3.37
STRADB-204ENST00000447698 SHANK2Q9UPX8 1470 aa36.08■■■■□ 3.37
STRADB-204ENST00000447698 ZMYM3Q14202 1370 aa36.08■■■■□ 3.37
STRADB-204ENST00000447698 HSPA2P54652 639 aa36.06■■■■□ 3.36
STRADB-204ENST00000447698 PPP6R1Q9UPN7 881 aa36.06■■■■□ 3.36
STRADB-204ENST00000447698 CHIC2Q9UKJ5 165 aa36.04■■■■□ 3.36
STRADB-204ENST00000447698 PREX1Q8TCU6 1659 aa36.03■■■■□ 3.36
STRADB-204ENST00000447698 RRP7BPQ9NSQ0 103 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms