RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 RRP7BPQ9NSQ0 103 aa8.64□□□□□ -1.03
PROM1-201ENST00000447510 PHLDB1Q86UU1 1377 aa8.64□□□□□ -1.03
PROM1-201ENST00000447510 ARHGAP5Q13017 1502 aa8.64□□□□□ -1.03
PROM1-201ENST00000447510 MYOM3Q5VTT5 1437 aa8.64□□□□□ -1.03
PROM1-201ENST00000447510 MAP3K1Q13233 1512 aa8.64□□□□□ -1.03
PROM1-201ENST00000447510 KIF14Q15058 1648 aa8.63□□□□□ -1.03
PROM1-201ENST00000447510 ARID4BQ4LE39 1312 aaPredicted RBP8.63□□□□□ -1.03
PROM1-201ENST00000447510 ZCCHC11Q5TAX3 1644 aaKnown RBP8.63□□□□□ -1.03
PROM1-201ENST00000447510 SPAG9O60271 1321 aaKnown RBP8.62□□□□□ -1.03
PROM1-201ENST00000447510 SUPT6HQ7KZ85 1726 aaKnown RBP8.62□□□□□ -1.03
PROM1-201ENST00000447510 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
PROM1-201ENST00000447510 RSPH4AQ5TD94 716 aa8.61□□□□□ -1.03
PROM1-201ENST00000447510 FGD6Q6ZV73 1430 aa8.61□□□□□ -1.03
PROM1-201ENST00000447510 AFAP1Q8N556 730 aa8.61□□□□□ -1.03
PROM1-201ENST00000447510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.61□□□□□ -1.03
PROM1-201ENST00000447510 RAPGEF3O95398 923 aa8.61□□□□□ -1.03
PROM1-201ENST00000447510 PLPPR3Q6T4P5 718 aa8.59□□□□□ -1.03
PROM1-201ENST00000447510 SCAPERQ9BY12 1400 aa8.59□□□□□ -1.03
PROM1-201ENST00000447510 FANCAO15360 1455 aa8.58□□□□□ -1.04
PROM1-201ENST00000447510 PLCH2O75038 1416 aa8.58□□□□□ -1.04
PROM1-201ENST00000447510 MLECQ14165 292 aa8.58□□□□□ -1.04
PROM1-201ENST00000447510 MAGI3Q5TCQ9 1506 aa8.58□□□□□ -1.04
PROM1-201ENST00000447510 GPATCH8Q9UKJ3 1502 aaKnown RBP8.58□□□□□ -1.04
PROM1-201ENST00000447510 CFAP43Q8NDM7 1665 aa8.58□□□□□ -1.04
PROM1-201ENST00000447510 MIA2Q96PC5 1412 aa8.58□□□□□ -1.04
PROM1-201ENST00000447510 ABCC10Q5T3U5 1492 aa8.57□□□□□ -1.04
PROM1-201ENST00000447510 TEX14Q8IWB6 1497 aa8.57□□□□□ -1.04
PROM1-201ENST00000447510 ANP32EQ9BTT0 268 aa8.57□□□□□ -1.04
PROM1-201ENST00000447510 ADGRL1O94910 1474 aa8.56□□□□□ -1.04
PROM1-201ENST00000447510 AKNAQ7Z591 1439 aa8.56□□□□□ -1.04
PROM1-201ENST00000447510 PLEKHH2Q8IVE3 1493 aa8.56□□□□□ -1.04
PROM1-201ENST00000447510 MAPKBP1O60336 1514 aa8.55□□□□□ -1.04
PROM1-201ENST00000447510 ANKRD30AQ9BXX3 1397 aa8.55□□□□□ -1.04
PROM1-201ENST00000447510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.55□□□□□ -1.04
PROM1-201ENST00000447510 GGT6Q6P531 493 aa8.55□□□□□ -1.04
PROM1-201ENST00000447510 KIF3BO15066 747 aa8.54□□□□□ -1.04
PROM1-201ENST00000447510 DENND4BO75064 1496 aaPredicted RBP8.53□□□□□ -1.04
PROM1-201ENST00000447510 CAMSAP2Q08AD1 1489 aa8.53□□□□□ -1.04
PROM1-201ENST00000447510 PRKCSHP14314 528 aaPredicted RBP8.53□□□□□ -1.04
PROM1-201ENST00000447510 TSPOAP1O95153 1857 aa8.53□□□□□ -1.04
PROM1-201ENST00000447510 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.05
PROM1-201ENST00000447510 RRBP1Q9P2E9 1410 aaKnown RBP8.52□□□□□ -1.05
PROM1-201ENST00000447510 LRRIQ1Q96JM4 1722 aa8.51□□□□□ -1.05
PROM1-201ENST00000447510 PTPN23Q9H3S7 1636 aa8.51□□□□□ -1.05
PROM1-201ENST00000447510 ITSN2Q9NZM3 1697 aa8.51□□□□□ -1.05
PROM1-201ENST00000447510 CCDC141Q6ZP82 1450 aa8.5□□□□□ -1.05
PROM1-201ENST00000447510 C9orf84Q5VXU9 1444 aa8.5□□□□□ -1.05
PROM1-201ENST00000447510 SLC4A1APQ9BWU0 796 aaKnown RBP8.5□□□□□ -1.05
PROM1-201ENST00000447510 KIF15Q9NS87 1388 aa8.5□□□□□ -1.05
PROM1-201ENST00000447510 BCANQ96GW7 911 aa8.5□□□□□ -1.05
PROM1-201ENST00000447510 DAPK1P53355 1430 aa8.49□□□□□ -1.05
PROM1-201ENST00000447510 NEO1Q92859 1461 aa8.49□□□□□ -1.05
PROM1-201ENST00000447510 TRAPPC8Q9Y2L5 1435 aa8.49□□□□□ -1.05
PROM1-201ENST00000447510 SYCP2Q9BX26 1530 aa8.49□□□□□ -1.05
PROM1-201ENST00000447510 MYO5CQ9NQX4 1742 aa8.49□□□□□ -1.05
PROM1-201ENST00000447510 MIER1Q8N108 512 aa8.49□□□□□ -1.05
PROM1-201ENST00000447510 KIAA1107Q9UPP5 1409 aa8.49□□□□□ -1.05
PROM1-201ENST00000447510 ABCC5O15440 1437 aa8.48□□□□□ -1.05
PROM1-201ENST00000447510 DIP2BQ9P265 1576 aa8.48□□□□□ -1.05
PROM1-201ENST00000447510 KANK1Q14678 1352 aa8.48□□□□□ -1.05
PROM1-201ENST00000447510 SETD5Q9C0A6 1442 aa8.48□□□□□ -1.05
PROM1-201ENST00000447510 ABCA9Q8IUA7 1624 aa8.47□□□□□ -1.05
PROM1-201ENST00000447510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.47□□□□□ -1.05
PROM1-201ENST00000447510 ZNF518AQ6AHZ1 1483 aa8.47□□□□□ -1.05
PROM1-201ENST00000447510 WASHC2CQ9Y4E1 1318 aa8.47□□□□□ -1.05
PROM1-201ENST00000447510 ZNF316A6NFI3 1004 aaPredicted RBP8.46□□□□□ -1.05
PROM1-201ENST00000447510 CHGAP10645 457 aaKnown RBP8.46□□□□□ -1.05
PROM1-201ENST00000447510 NUP155O75694 1391 aa8.46□□□□□ -1.05
PROM1-201ENST00000447510 STAG3Q9UJ98 1225 aa8.46□□□□□ -1.06
PROM1-201ENST00000447510 GLI2P10070 1586 aa8.45□□□□□ -1.06
PROM1-201ENST00000447510 RAB3GAP2Q9H2M9 1393 aa8.45□□□□□ -1.06
PROM1-201ENST00000447510 ANKRD50Q9ULJ7 1429 aa8.45□□□□□ -1.06
PROM1-201ENST00000447510 PREX2Q70Z35 1606 aa8.45□□□□□ -1.06
PROM1-201ENST00000447510 CFAP74Q9C0B2 1584 aa8.44□□□□□ -1.06
PROM1-201ENST00000447510 POGZQ7Z3K3 1410 aa8.44□□□□□ -1.06
PROM1-201ENST00000447510 CDC42BPAQ5VT25 1732 aa8.44□□□□□ -1.06
PROM1-201ENST00000447510 TCOF1Q13428 1488 aaKnown RBP8.44□□□□□ -1.06
PROM1-201ENST00000447510 SAMD9LQ8IVG5 1584 aa8.43□□□□□ -1.06
PROM1-201ENST00000447510 ARAP3Q8WWN8 1544 aa8.43□□□□□ -1.06
PROM1-201ENST00000447510 NCOA1Q15788 1441 aa8.42□□□□□ -1.06
PROM1-201ENST00000447510 PKD2Q13563 968 aa8.42□□□□□ -1.06
PROM1-201ENST00000447510 PTPRKQ15262 1439 aa8.42□□□□□ -1.06
PROM1-201ENST00000447510 ERICH6Q7L0X2 663 aa8.42□□□□□ -1.06
PROM1-201ENST00000447510 ABCC1P33527 1531 aa8.42□□□□□ -1.06
PROM1-201ENST00000447510 MBD5Q9P267 1494 aa8.42□□□□□ -1.06
PROM1-201ENST00000447510 TSHZ2Q9NRE2 1034 aa8.42□□□□□ -1.06
PROM1-201ENST00000447510 ROCK1Q13464 1354 aa8.41□□□□□ -1.06
PROM1-201ENST00000447510 ARHGEF12Q9NZN5 1544 aa8.41□□□□□ -1.06
PROM1-201ENST00000447510 CDC42BPBQ9Y5S2 1711 aa8.41□□□□□ -1.06
PROM1-201ENST00000447510 KDM6BO15054 1643 aa8.41□□□□□ -1.06
PROM1-201ENST00000447510 FOXD1Q16676 465 aa8.41□□□□□ -1.06
PROM1-201ENST00000447510 DHX29Q7Z478 1369 aaKnown RBP8.41□□□□□ -1.06
PROM1-201ENST00000447510 MPHOSPH9Q99550 1183 aa8.41□□□□□ -1.06
PROM1-201ENST00000447510 SUPT16HQ9Y5B9 1047 aaKnown RBP8.4□□□□□ -1.06
PROM1-201ENST00000447510 YEATS2Q9ULM3 1422 aa8.4□□□□□ -1.06
PROM1-201ENST00000447510 RTEL1-TNFRSF6BF6WH68 1400 aa8.4□□□□□ -1.07
PROM1-201ENST00000447510 A2MP01023 1474 aa8.4□□□□□ -1.07
PROM1-201ENST00000447510 MAP3K4Q9Y6R4 1608 aa8.39□□□□□ -1.07
PROM1-201ENST00000447510 HFM1A2PYH4 1435 aa8.39□□□□□ -1.07
PROM1-201ENST00000447510 ZNF326Q5BKZ1 582 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms