RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 GPATCH8Q9UKJ3 1502 aaKnown RBP20.79■□□□□ 0.92
HLA-DOB-207ENST00000447394 PPARGC1BQ86YN6 1023 aaKnown RBP20.79■□□□□ 0.92
HLA-DOB-207ENST00000447394 ARAP3Q8WWN8 1544 aa20.78■□□□□ 0.92
HLA-DOB-207ENST00000447394 CCNB3Q8WWL7 1395 aa20.77■□□□□ 0.92
HLA-DOB-207ENST00000447394 COL17A1Q9UMD9 1497 aaPredicted RBP20.76■□□□□ 0.91
HLA-DOB-207ENST00000447394 SAMD9LQ8IVG5 1584 aa20.76■□□□□ 0.91
HLA-DOB-207ENST00000447394 NEO1Q92859 1461 aa20.75■□□□□ 0.91
HLA-DOB-207ENST00000447394 FRMPD1Q5SYB0 1578 aa20.73■□□□□ 0.91
HLA-DOB-207ENST00000447394 RICTORQ6R327 1708 aa20.73■□□□□ 0.91
HLA-DOB-207ENST00000447394 AKNAQ7Z591 1439 aa20.72■□□□□ 0.91
HLA-DOB-207ENST00000447394 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
HLA-DOB-207ENST00000447394 ABCC1P33527 1531 aa20.71■□□□□ 0.91
HLA-DOB-207ENST00000447394 ADGRL1O94910 1474 aa20.7■□□□□ 0.9
HLA-DOB-207ENST00000447394 ZNF777Q9ULD5 760 aaPredicted RBP20.68■□□□□ 0.9
HLA-DOB-207ENST00000447394 SYCP2Q9BX26 1530 aa20.68■□□□□ 0.9
HLA-DOB-207ENST00000447394 ARHGEF12Q9NZN5 1544 aa20.68■□□□□ 0.9
HLA-DOB-207ENST00000447394 EFCAB2Q5VUJ9 269 aa20.67■□□□□ 0.9
HLA-DOB-207ENST00000447394 MYOM3Q5VTT5 1437 aa20.67■□□□□ 0.9
HLA-DOB-207ENST00000447394 CAMSAP2Q08AD1 1489 aa20.65■□□□□ 0.9
HLA-DOB-207ENST00000447394 SCAPERQ9BY12 1400 aa20.65■□□□□ 0.9
HLA-DOB-207ENST00000447394 ZNF644Q9H582 1327 aaPredicted RBP20.65■□□□□ 0.9
HLA-DOB-207ENST00000447394 CFDP1Q9UEE9 299 aaPredicted RBP20.65■□□□□ 0.9
HLA-DOB-207ENST00000447394 RAPGEF3O95398 923 aa20.63■□□□□ 0.89
HLA-DOB-207ENST00000447394 PTPN23Q9H3S7 1636 aa20.63■□□□□ 0.89
HLA-DOB-207ENST00000447394 DENND4BO75064 1496 aaPredicted RBP20.62■□□□□ 0.89
HLA-DOB-207ENST00000447394 POGZQ7Z3K3 1410 aa20.61■□□□□ 0.89
HLA-DOB-207ENST00000447394 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
HLA-DOB-207ENST00000447394 FGD6Q6ZV73 1430 aa20.59■□□□□ 0.89
HLA-DOB-207ENST00000447394 KDM5CP41229 1560 aa20.58■□□□□ 0.88
HLA-DOB-207ENST00000447394 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.88
HLA-DOB-207ENST00000447394 MIA2Q96PC5 1412 aa20.56■□□□□ 0.88
HLA-DOB-207ENST00000447394 HNRNPMP52272 730 aaKnown RBP eCLIP20.56■□□□□ 0.88
HLA-DOB-207ENST00000447394 PLEKHH2Q8IVE3 1493 aa20.56■□□□□ 0.88
HLA-DOB-207ENST00000447394 ZNF518AQ6AHZ1 1483 aa20.55■□□□□ 0.88
HLA-DOB-207ENST00000447394 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
HLA-DOB-207ENST00000447394 CROCC2H7BZ55 1655 aa20.54■□□□□ 0.88
HLA-DOB-207ENST00000447394 MBD5Q9P267 1494 aa20.54■□□□□ 0.88
HLA-DOB-207ENST00000447394 AFAP1Q8N556 730 aa20.53■□□□□ 0.88
HLA-DOB-207ENST00000447394 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
HLA-DOB-207ENST00000447394 ARHGEF40Q8TER5 1519 aa20.53■□□□□ 0.88
HLA-DOB-207ENST00000447394 KIAA1107Q9UPP5 1409 aa20.53■□□□□ 0.88
HLA-DOB-207ENST00000447394 KIDINS220Q9ULH0 1771 aa20.52■□□□□ 0.88
HLA-DOB-207ENST00000447394 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
HLA-DOB-207ENST00000447394 ABCA6Q8N139 1617 aa20.52■□□□□ 0.88
HLA-DOB-207ENST00000447394 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
HLA-DOB-207ENST00000447394 YEATS2Q9ULM3 1422 aa20.51■□□□□ 0.87
HLA-DOB-207ENST00000447394 SIGLEC1Q9BZZ2 1709 aa20.5■□□□□ 0.87
HLA-DOB-207ENST00000447394 ZFYVE16Q7Z3T8 1539 aa20.5■□□□□ 0.87
HLA-DOB-207ENST00000447394 DNMT1P26358 1616 aaKnown RBP20.49■□□□□ 0.87
HLA-DOB-207ENST00000447394 CCDC141Q6ZP82 1450 aa20.49■□□□□ 0.87
HLA-DOB-207ENST00000447394 DIP2CQ9Y2E4 1556 aa20.47■□□□□ 0.87
HLA-DOB-207ENST00000447394 ATP7AQ04656 1500 aa20.47■□□□□ 0.87
HLA-DOB-207ENST00000447394 ADGBQ8N7X0 1667 aa20.45■□□□□ 0.86
HLA-DOB-207ENST00000447394 FAM50AQ14320 339 aaKnown RBP20.45■□□□□ 0.86
HLA-DOB-207ENST00000447394 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
HLA-DOB-207ENST00000447394 DAPK1P53355 1430 aa20.43■□□□□ 0.86
HLA-DOB-207ENST00000447394 ABCC5O15440 1437 aa20.42■□□□□ 0.86
HLA-DOB-207ENST00000447394 MAGI2Q86UL8 1455 aa20.42■□□□□ 0.86
HLA-DOB-207ENST00000447394 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
HLA-DOB-207ENST00000447394 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
HLA-DOB-207ENST00000447394 SPAG9O60271 1321 aaKnown RBP20.41■□□□□ 0.86
HLA-DOB-207ENST00000447394 RRBP1Q9P2E9 1410 aaKnown RBP20.41■□□□□ 0.86
HLA-DOB-207ENST00000447394 C9orf84Q5VXU9 1444 aa20.38■□□□□ 0.85
HLA-DOB-207ENST00000447394 SHANK2Q9UPX8 1470 aa20.37■□□□□ 0.85
HLA-DOB-207ENST00000447394 PLXNC1O60486 1568 aa20.36■□□□□ 0.85
HLA-DOB-207ENST00000447394 PTPRKQ15262 1439 aa20.36■□□□□ 0.85
HLA-DOB-207ENST00000447394 ATP10AO60312 1499 aa20.35■□□□□ 0.85
HLA-DOB-207ENST00000447394 RTEL1-TNFRSF6BF6WH68 1400 aa20.34■□□□□ 0.85
HLA-DOB-207ENST00000447394 ITGAEP38570 1179 aa20.33■□□□□ 0.85
HLA-DOB-207ENST00000447394 REREQ9P2R6 1566 aa20.33■□□□□ 0.84
HLA-DOB-207ENST00000447394 CHIC2Q9UKJ5 165 aa20.32■□□□□ 0.84
HLA-DOB-207ENST00000447394 RSPH4AQ5TD94 716 aa20.31■□□□□ 0.84
HLA-DOB-207ENST00000447394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.3■□□□□ 0.84
HLA-DOB-207ENST00000447394 BCORL1Q5H9F3 1711 aa20.3■□□□□ 0.84
HLA-DOB-207ENST00000447394 TSPY4P0CV99 314 aa20.29■□□□□ 0.84
HLA-DOB-207ENST00000447394 TSPY10P0CW01 314 aa20.29■□□□□ 0.84
HLA-DOB-207ENST00000447394 A2MP01023 1474 aa20.29■□□□□ 0.84
HLA-DOB-207ENST00000447394 ADGRL2O95490 1459 aa20.26■□□□□ 0.83
HLA-DOB-207ENST00000447394 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
HLA-DOB-207ENST00000447394 MADDQ8WXG6 1647 aa20.24■□□□□ 0.83
HLA-DOB-207ENST00000447394 KIF15Q9NS87 1388 aa20.23■□□□□ 0.83
HLA-DOB-207ENST00000447394 AGLP35573 1532 aa20.23■□□□□ 0.83
HLA-DOB-207ENST00000447394 ADAMTSL3P82987 1691 aa20.23■□□□□ 0.83
HLA-DOB-207ENST00000447394 RRP7BPQ9NSQ0 103 aa20.23■□□□□ 0.83
HLA-DOB-207ENST00000447394 FER1L4A9Z1Z3 1794 aa20.23■□□□□ 0.83
HLA-DOB-207ENST00000447394 DUOX2Q9NRD8 1548 aa20.22■□□□□ 0.83
HLA-DOB-207ENST00000447394 NCOA1Q15788 1441 aa20.22■□□□□ 0.83
HLA-DOB-207ENST00000447394 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
HLA-DOB-207ENST00000447394 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
HLA-DOB-207ENST00000447394 DHX29Q7Z478 1369 aaKnown RBP20.21■□□□□ 0.83
HLA-DOB-207ENST00000447394 RIMS1Q86UR5 1692 aaKnown RBP20.2■□□□□ 0.82
HLA-DOB-207ENST00000447394 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
HLA-DOB-207ENST00000447394 MLECQ14165 292 aa20.2■□□□□ 0.82
HLA-DOB-207ENST00000447394 RNF17Q9BXT8 1623 aaKnown RBP20.18■□□□□ 0.82
HLA-DOB-207ENST00000447394 MROH1Q8NDA8 1641 aa20.17■□□□□ 0.82
HLA-DOB-207ENST00000447394 ROCK1Q13464 1354 aa20.16■□□□□ 0.82
HLA-DOB-207ENST00000447394 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
HLA-DOB-207ENST00000447394 KDM4FA0A1W2PPD8 638 aa20.15■□□□□ 0.82
HLA-DOB-207ENST00000447394 ERBINQ96RT1 1412 aa20.15■□□□□ 0.82
HLA-DOB-207ENST00000447394 CEP152O94986 1710 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms