RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
BCRP3-201ENST00000447261 HECW2Q9P2P5 1572 aa25.18■■□□□ 1.62
BCRP3-201ENST00000447261 ADAMTSL3P82987 1691 aa25.17■■□□□ 1.62
BCRP3-201ENST00000447261 ARHGAP5Q13017 1502 aa25.16■■□□□ 1.62
BCRP3-201ENST00000447261 ZFYVE16Q7Z3T8 1539 aa25.16■■□□□ 1.62
BCRP3-201ENST00000447261 BCORL1Q5H9F3 1711 aa25.16■■□□□ 1.62
BCRP3-201ENST00000447261 POGZQ7Z3K3 1410 aa25.16■■□□□ 1.62
BCRP3-201ENST00000447261 FYCO1Q9BQS8 1478 aa25.15■■□□□ 1.62
BCRP3-201ENST00000447261 YEATS2Q9ULM3 1422 aa25.14■■□□□ 1.62
BCRP3-201ENST00000447261 PTPRMP28827 1452 aa25.12■■□□□ 1.61
BCRP3-201ENST00000447261 MAGI2Q86UL8 1455 aa25.12■■□□□ 1.61
BCRP3-201ENST00000447261 MADDQ8WXG6 1647 aa25.11■■□□□ 1.61
BCRP3-201ENST00000447261 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.6
BCRP3-201ENST00000447261 MYT1LQ9UL68 1186 aa25.05■■□□□ 1.6
BCRP3-201ENST00000447261 PREX2Q70Z35 1606 aa25.05■■□□□ 1.6
BCRP3-201ENST00000447261 ZNF518AQ6AHZ1 1483 aa25.05■■□□□ 1.6
BCRP3-201ENST00000447261 SIGLEC1Q9BZZ2 1709 aa25.05■■□□□ 1.6
BCRP3-201ENST00000447261 MLECQ14165 292 aa25.04■■□□□ 1.6
BCRP3-201ENST00000447261 AFAP1Q8N556 730 aa25.04■■□□□ 1.6
BCRP3-201ENST00000447261 RIMS1Q86UR5 1692 aaKnown RBP25.04■■□□□ 1.6
BCRP3-201ENST00000447261 ATP10AO60312 1499 aa25.02■■□□□ 1.6
BCRP3-201ENST00000447261 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
BCRP3-201ENST00000447261 CDC42BPAQ5VT25 1732 aa24.99■■□□□ 1.59
BCRP3-201ENST00000447261 C9orf84Q5VXU9 1444 aa24.99■■□□□ 1.59
BCRP3-201ENST00000447261 KDM5CP41229 1560 aa24.98■■□□□ 1.59
BCRP3-201ENST00000447261 ZNF777Q9ULD5 760 aaPredicted RBP24.96■■□□□ 1.59
BCRP3-201ENST00000447261 ABCC1P33527 1531 aa24.96■■□□□ 1.59
BCRP3-201ENST00000447261 TRAPPC8Q9Y2L5 1435 aa24.94■■□□□ 1.58
BCRP3-201ENST00000447261 ARHGEF12Q9NZN5 1544 aa24.94■■□□□ 1.58
BCRP3-201ENST00000447261 ITSN2Q9NZM3 1697 aa24.94■■□□□ 1.58
BCRP3-201ENST00000447261 MTUS2Q5JR59 1369 aa24.94■■□□□ 1.58
BCRP3-201ENST00000447261 FER1L4A9Z1Z3 1794 aa24.93■■□□□ 1.58
BCRP3-201ENST00000447261 TRIM26Q12899 539 aaPredicted RBP24.92■■□□□ 1.58
BCRP3-201ENST00000447261 GPATCH8Q9UKJ3 1502 aaKnown RBP24.91■■□□□ 1.58
BCRP3-201ENST00000447261 DIP2CQ9Y2E4 1556 aa24.9■■□□□ 1.58
BCRP3-201ENST00000447261 MLH3Q9UHC1 1453 aa24.89■■□□□ 1.57
BCRP3-201ENST00000447261 CCNB3Q8WWL7 1395 aa24.89■■□□□ 1.57
BCRP3-201ENST00000447261 ABCA6Q8N139 1617 aa24.88■■□□□ 1.57
BCRP3-201ENST00000447261 SAMD9LQ8IVG5 1584 aa24.87■■□□□ 1.57
BCRP3-201ENST00000447261 CFDP1Q9UEE9 299 aaPredicted RBP24.87■■□□□ 1.57
BCRP3-201ENST00000447261 SYCP2Q9BX26 1530 aa24.85■■□□□ 1.57
BCRP3-201ENST00000447261 LMTK3Q96Q04 1460 aa24.84■■□□□ 1.57
BCRP3-201ENST00000447261 PCGF6Q9BYE7 350 aa24.84■■□□□ 1.57
BCRP3-201ENST00000447261 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
BCRP3-201ENST00000447261 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
BCRP3-201ENST00000447261 EHBP1L1Q8N3D4 1523 aa24.82■■□□□ 1.56
BCRP3-201ENST00000447261 REREQ9P2R6 1566 aa24.81■■□□□ 1.56
BCRP3-201ENST00000447261 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
BCRP3-201ENST00000447261 SPAG9O60271 1321 aaKnown RBP24.79■■□□□ 1.56
BCRP3-201ENST00000447261 CEBPAP49715 358 aaPredicted RBP24.78■■□□□ 1.56
BCRP3-201ENST00000447261 PLEKHH2Q8IVE3 1493 aa24.78■■□□□ 1.56
BCRP3-201ENST00000447261 HSPA2P54652 639 aa24.77■■□□□ 1.56
BCRP3-201ENST00000447261 ILDR1Q86SU0 546 aaPredicted RBP24.77■■□□□ 1.56
BCRP3-201ENST00000447261 KIAA1107Q9UPP5 1409 aa24.76■■□□□ 1.55
BCRP3-201ENST00000447261 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
BCRP3-201ENST00000447261 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
BCRP3-201ENST00000447261 AGLP35573 1532 aa24.75■■□□□ 1.55
BCRP3-201ENST00000447261 ZNF644Q9H582 1327 aaPredicted RBP24.73■■□□□ 1.55
BCRP3-201ENST00000447261 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
BCRP3-201ENST00000447261 SUPT6HQ7KZ85 1726 aaKnown RBP24.69■■□□□ 1.54
BCRP3-201ENST00000447261 INO80Q9ULG1 1556 aaPredicted RBP24.67■■□□□ 1.54
BCRP3-201ENST00000447261 NCOA2Q15596 1464 aa24.67■■□□□ 1.54
BCRP3-201ENST00000447261 PREX1Q8TCU6 1659 aa24.67■■□□□ 1.54
BCRP3-201ENST00000447261 C3P01024 1663 aa24.64■■□□□ 1.54
BCRP3-201ENST00000447261 A2MP01023 1474 aa24.64■■□□□ 1.53
BCRP3-201ENST00000447261 SETD1BQ9UPS6 1966 aaKnown RBP24.63■■□□□ 1.53
BCRP3-201ENST00000447261 MBD5Q9P267 1494 aa24.62■■□□□ 1.53
BCRP3-201ENST00000447261 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
BCRP3-201ENST00000447261 UHRF1BP1Q6BDS2 1440 aa24.6■■□□□ 1.53
BCRP3-201ENST00000447261 APLP2Q06481 763 aa24.6■■□□□ 1.53
BCRP3-201ENST00000447261 CAMSAP2Q08AD1 1489 aa24.59■■□□□ 1.53
BCRP3-201ENST00000447261 LRRC9Q6ZRR7 1453 aa24.59■■□□□ 1.53
BCRP3-201ENST00000447261 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
BCRP3-201ENST00000447261 ADGBQ8N7X0 1667 aa24.57■■□□□ 1.52
BCRP3-201ENST00000447261 GGT6Q6P531 493 aa24.57■■□□□ 1.52
BCRP3-201ENST00000447261 CCDC141Q6ZP82 1450 aa24.55■■□□□ 1.52
BCRP3-201ENST00000447261 RTEL1-TNFRSF6BF6WH68 1400 aa24.54■■□□□ 1.52
BCRP3-201ENST00000447261 KANK4Q5T7N3 995 aaPredicted RBP24.54■■□□□ 1.52
BCRP3-201ENST00000447261 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
BCRP3-201ENST00000447261 MROH2AA6NES4 1674 aa24.52■■□□□ 1.52
BCRP3-201ENST00000447261 CLTCQ00610 1675 aaKnown RBP24.52■■□□□ 1.52
BCRP3-201ENST00000447261 ZMYM3Q14202 1370 aa24.52■■□□□ 1.52
BCRP3-201ENST00000447261 RSPH4AQ5TD94 716 aa24.51■■□□□ 1.51
BCRP3-201ENST00000447261 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
BCRP3-201ENST00000447261 FBXO41Q8TF61 875 aa24.5■■□□□ 1.51
BCRP3-201ENST00000447261 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
BCRP3-201ENST00000447261 TSPY4P0CV99 314 aa24.46■■□□□ 1.51
BCRP3-201ENST00000447261 TSPY10P0CW01 314 aa24.46■■□□□ 1.51
BCRP3-201ENST00000447261 STRCQ7RTU9 1775 aa24.46■■□□□ 1.51
BCRP3-201ENST00000447261 ARHGEF5Q12774 1597 aa24.46■■□□□ 1.51
BCRP3-201ENST00000447261 NPATQ14207 1427 aa24.46■■□□□ 1.51
BCRP3-201ENST00000447261 KIF3BO15066 747 aa24.44■■□□□ 1.5
BCRP3-201ENST00000447261 PPP6R1Q9UPN7 881 aa24.44■■□□□ 1.5
BCRP3-201ENST00000447261 DMRT2Q9Y5R5 561 aa24.44■■□□□ 1.5
BCRP3-201ENST00000447261 MYOM3Q5VTT5 1437 aa24.42■■□□□ 1.5
BCRP3-201ENST00000447261 PTPRKQ15262 1439 aa24.39■■□□□ 1.49
BCRP3-201ENST00000447261 MIA2Q96PC5 1412 aa24.39■■□□□ 1.49
BCRP3-201ENST00000447261 CERKQ8TCT0 537 aa24.38■■□□□ 1.49
BCRP3-201ENST00000447261 MYO3AQ8NEV4 1616 aa24.35■■□□□ 1.49
BCRP3-201ENST00000447261 CAMSAP1Q5T5Y3 1602 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms