RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ARHGAP5Q13017 1502 aa27.77■■■□□ 2.04
TRAPPC4-203ENST00000447216 ARAP3Q8WWN8 1544 aa27.72■■■□□ 2.03
TRAPPC4-203ENST00000447216 AEBP2Q6ZN18 517 aaPredicted RBP27.71■■■□□ 2.03
TRAPPC4-203ENST00000447216 CFDP1Q9UEE9 299 aaPredicted RBP27.71■■■□□ 2.03
TRAPPC4-203ENST00000447216 ZNF777Q9ULD5 760 aaPredicted RBP27.69■■■□□ 2.02
TRAPPC4-203ENST00000447216 FANCAO15360 1455 aa27.69■■■□□ 2.02
TRAPPC4-203ENST00000447216 FGD6Q6ZV73 1430 aa27.68■■■□□ 2.02
TRAPPC4-203ENST00000447216 PTPN23Q9H3S7 1636 aa27.67■■■□□ 2.02
TRAPPC4-203ENST00000447216 SAMD9LQ8IVG5 1584 aa27.67■■■□□ 2.02
TRAPPC4-203ENST00000447216 CFAP74Q9C0B2 1584 aa27.67■■■□□ 2.02
TRAPPC4-203ENST00000447216 EFCAB2Q5VUJ9 269 aa27.66■■■□□ 2.02
TRAPPC4-203ENST00000447216 MIA2Q96PC5 1412 aa27.65■■■□□ 2.02
TRAPPC4-203ENST00000447216 ZNF644Q9H582 1327 aaPredicted RBP27.65■■■□□ 2.02
TRAPPC4-203ENST00000447216 TEX14Q8IWB6 1497 aa27.64■■■□□ 2.02
TRAPPC4-203ENST00000447216 CAMSAP2Q08AD1 1489 aa27.63■■■□□ 2.01
TRAPPC4-203ENST00000447216 AKNAQ7Z591 1439 aa27.61■■■□□ 2.01
TRAPPC4-203ENST00000447216 NEO1Q92859 1461 aa27.61■■■□□ 2.01
TRAPPC4-203ENST00000447216 ABCC1P33527 1531 aa27.58■■■□□ 2.01
TRAPPC4-203ENST00000447216 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
TRAPPC4-203ENST00000447216 RRBP1Q9P2E9 1410 aaKnown RBP27.57■■■□□ 2
TRAPPC4-203ENST00000447216 ADGRL1O94910 1474 aa27.57■■■□□ 2
TRAPPC4-203ENST00000447216 SYCP2Q9BX26 1530 aa27.57■■■□□ 2
TRAPPC4-203ENST00000447216 FAM50AQ14320 339 aaKnown RBP27.56■■■□□ 2
TRAPPC4-203ENST00000447216 ARHGEF12Q9NZN5 1544 aa27.55■■■□□ 2
TRAPPC4-203ENST00000447216 PLEKHH2Q8IVE3 1493 aa27.52■■■□□ 2
TRAPPC4-203ENST00000447216 SCAPERQ9BY12 1400 aa27.52■■■□□ 2
TRAPPC4-203ENST00000447216 HNRNPMP52272 730 aaKnown RBP eCLIP27.52■■■□□ 2
TRAPPC4-203ENST00000447216 KIAA1107Q9UPP5 1409 aa27.49■■□□□ 1.99
TRAPPC4-203ENST00000447216 MBD5Q9P267 1494 aa27.47■■□□□ 1.99
TRAPPC4-203ENST00000447216 TRAPPC8Q9Y2L5 1435 aa27.47■■□□□ 1.99
TRAPPC4-203ENST00000447216 RICTORQ6R327 1708 aa27.47■■□□□ 1.99
TRAPPC4-203ENST00000447216 ARHGEF5Q12774 1597 aa27.46■■□□□ 1.99
TRAPPC4-203ENST00000447216 DNMT1P26358 1616 aaKnown RBP27.45■■□□□ 1.99
TRAPPC4-203ENST00000447216 DENND4BO75064 1496 aaPredicted RBP27.45■■□□□ 1.99
TRAPPC4-203ENST00000447216 COL17A1Q9UMD9 1497 aaPredicted RBP27.45■■□□□ 1.99
TRAPPC4-203ENST00000447216 FRMPD1Q5SYB0 1578 aa27.43■■□□□ 1.98
TRAPPC4-203ENST00000447216 CROCC2H7BZ55 1655 aa27.43■■□□□ 1.98
TRAPPC4-203ENST00000447216 KDM6BO15054 1643 aa27.43■■□□□ 1.98
TRAPPC4-203ENST00000447216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.43■■□□□ 1.983e-6■■■■□ 26.4
TRAPPC4-203ENST00000447216 POGZQ7Z3K3 1410 aa27.42■■□□□ 1.98
TRAPPC4-203ENST00000447216 RAPGEF3O95398 923 aa27.42■■□□□ 1.98
TRAPPC4-203ENST00000447216 CCDC141Q6ZP82 1450 aa27.41■■□□□ 1.98
TRAPPC4-203ENST00000447216 ITGAEP38570 1179 aa27.41■■□□□ 1.98
TRAPPC4-203ENST00000447216 AFAP1Q8N556 730 aa27.4■■□□□ 1.98
TRAPPC4-203ENST00000447216 ABCC5O15440 1437 aa27.4■■□□□ 1.98
TRAPPC4-203ENST00000447216 DAPK1P53355 1430 aa27.4■■□□□ 1.98
TRAPPC4-203ENST00000447216 ZNF518AQ6AHZ1 1483 aa27.38■■□□□ 1.97
TRAPPC4-203ENST00000447216 KDM5CP41229 1560 aa27.35■■□□□ 1.97
TRAPPC4-203ENST00000447216 PTPRKQ15262 1439 aa27.34■■□□□ 1.97
TRAPPC4-203ENST00000447216 RSPH4AQ5TD94 716 aa27.33■■□□□ 1.97
TRAPPC4-203ENST00000447216 TRIM26Q12899 539 aaPredicted RBP27.31■■□□□ 1.96
TRAPPC4-203ENST00000447216 CHIC2Q9UKJ5 165 aa27.31■■□□□ 1.96
TRAPPC4-203ENST00000447216 HECW2Q9P2P5 1572 aa27.31■■□□□ 1.96
TRAPPC4-203ENST00000447216 ADGBQ8N7X0 1667 aa27.3■■□□□ 1.96
TRAPPC4-203ENST00000447216 KIDINS220Q9ULH0 1771 aa27.3■■□□□ 1.96
TRAPPC4-203ENST00000447216 SPAG9O60271 1321 aaKnown RBP27.3■■□□□ 1.96
TRAPPC4-203ENST00000447216 C9orf84Q5VXU9 1444 aa27.3■■□□□ 1.96
TRAPPC4-203ENST00000447216 ZMYM4Q5VZL5 1548 aa27.3■■□□□ 1.96
TRAPPC4-203ENST00000447216 INO80Q9ULG1 1556 aaPredicted RBP27.3■■□□□ 1.96
TRAPPC4-203ENST00000447216 MAST1Q9Y2H9 1570 aa27.3■■□□□ 1.96
TRAPPC4-203ENST00000447216 TSPY4P0CV99 314 aa27.29■■□□□ 1.96
TRAPPC4-203ENST00000447216 TSPY10P0CW01 314 aa27.29■■□□□ 1.96
TRAPPC4-203ENST00000447216 SHANK2Q9UPX8 1470 aa27.29■■□□□ 1.96
TRAPPC4-203ENST00000447216 ZFYVE16Q7Z3T8 1539 aa27.28■■□□□ 1.96
TRAPPC4-203ENST00000447216 ATP7AQ04656 1500 aa27.27■■□□□ 1.96
TRAPPC4-203ENST00000447216 MYT1LQ9UL68 1186 aa27.27■■□□□ 1.96
TRAPPC4-203ENST00000447216 MLH3Q9UHC1 1453 aa27.24■■□□□ 1.95
TRAPPC4-203ENST00000447216 ABCA6Q8N139 1617 aa27.23■■□□□ 1.95
TRAPPC4-203ENST00000447216 RTEL1-TNFRSF6BF6WH68 1400 aa27.22■■□□□ 1.95
TRAPPC4-203ENST00000447216 YEATS2Q9ULM3 1422 aa27.21■■□□□ 1.95
TRAPPC4-203ENST00000447216 ADGRL2O95490 1459 aa27.19■■□□□ 1.94
TRAPPC4-203ENST00000447216 PLXNC1O60486 1568 aa27.19■■□□□ 1.94
TRAPPC4-203ENST00000447216 DIP2CQ9Y2E4 1556 aa27.18■■□□□ 1.94
TRAPPC4-203ENST00000447216 MAGI2Q86UL8 1455 aa27.18■■□□□ 1.94
TRAPPC4-203ENST00000447216 ARHGEF40Q8TER5 1519 aa27.17■■□□□ 1.94
TRAPPC4-203ENST00000447216 RRP7BPQ9NSQ0 103 aa27.17■■□□□ 1.94
TRAPPC4-203ENST00000447216 ANKRD30AQ9BXX3 1397 aa27.17■■□□□ 1.94
TRAPPC4-203ENST00000447216 NCOA1Q15788 1441 aa27.16■■□□□ 1.94
TRAPPC4-203ENST00000447216 ROCK1Q13464 1354 aa27.14■■□□□ 1.94
TRAPPC4-203ENST00000447216 KIF15Q9NS87 1388 aa27.12■■□□□ 1.93
TRAPPC4-203ENST00000447216 GCC2Q8IWJ2 1684 aa27.11■■□□□ 1.93
TRAPPC4-203ENST00000447216 PCGF6Q9BYE7 350 aa27.1■■□□□ 1.93
TRAPPC4-203ENST00000447216 ATP10AO60312 1499 aa27.08■■□□□ 1.93
TRAPPC4-203ENST00000447216 SIGLEC1Q9BZZ2 1709 aa27.07■■□□□ 1.92
TRAPPC4-203ENST00000447216 DUOX2Q9NRD8 1548 aa27.07■■□□□ 1.92
TRAPPC4-203ENST00000447216 NAIPQ13075 1403 aa27.07■■□□□ 1.92
TRAPPC4-203ENST00000447216 A2MP01023 1474 aa27.06■■□□□ 1.92
TRAPPC4-203ENST00000447216 HFM1A2PYH4 1435 aa27.05■■□□□ 1.92
TRAPPC4-203ENST00000447216 DHX29Q7Z478 1369 aaKnown RBP27.02■■□□□ 1.92
TRAPPC4-203ENST00000447216 REREQ9P2R6 1566 aa27.01■■□□□ 1.92
TRAPPC4-203ENST00000447216 ANKRD50Q9ULJ7 1429 aa26.99■■□□□ 1.91
TRAPPC4-203ENST00000447216 SETD5Q9C0A6 1442 aa26.98■■□□□ 1.91
TRAPPC4-203ENST00000447216 ERBINQ96RT1 1412 aa26.97■■□□□ 1.91
TRAPPC4-203ENST00000447216 EIF2AK4Q9P2K8 1649 aaKnown RBP26.97■■□□□ 1.91
TRAPPC4-203ENST00000447216 BCORL1Q5H9F3 1711 aa26.93■■□□□ 1.9
TRAPPC4-203ENST00000447216 AGLP35573 1532 aa26.92■■□□□ 1.9
TRAPPC4-203ENST00000447216 KIF3BO15066 747 aa26.92■■□□□ 1.9
TRAPPC4-203ENST00000447216 RAB3GAP2Q9H2M9 1393 aa26.92■■□□□ 1.9
TRAPPC4-203ENST00000447216 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
TRAPPC4-203ENST00000447216 RNF17Q9BXT8 1623 aaKnown RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms