RNA–Protein interactions for RNA: ENST00000447194.1

LINC01790-201, Transcript of long intergenic non-protein coding RNA 1790, humanhuman

TSL 2 BASIC

Gene LINC01790, Length 2,852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01790-201ENST00000447194 TTLL13PA6NNM8 815 aa3.68□□□□□ -1.82
LINC01790-201ENST00000447194 MKRN3Q13064 507 aaKnown RBP3.68□□□□□ -1.82
LINC01790-201ENST00000447194 HS3ST6Q96QI5 342 aa3.68□□□□□ -1.82
LINC01790-201ENST00000447194 PYGBP11216 843 aa3.68□□□□□ -1.82
LINC01790-201ENST00000447194 TMEM106CQ9BVX2 250 aa3.67□□□□□ -1.82
LINC01790-201ENST00000447194 RNF166Q96A37 237 aaPredicted RBP3.67□□□□□ -1.82
LINC01790-201ENST00000447194 GOLGA2Q08379 1002 aa3.66□□□□□ -1.82
LINC01790-201ENST00000447194 ZSWIM6Q9HCJ5 1215 aa3.66□□□□□ -1.82
LINC01790-201ENST00000447194 PDE4AP27815 886 aa3.66□□□□□ -1.82
LINC01790-201ENST00000447194 STK25O00506 426 aa3.65□□□□□ -1.82
LINC01790-201ENST00000447194 BCL11BQ9C0K0 894 aaPredicted RBP3.65□□□□□ -1.82
LINC01790-201ENST00000447194 STK24Q9Y6E0 443 aa3.65□□□□□ -1.82
LINC01790-201ENST00000447194 CHGAP10645 457 aaKnown RBP3.65□□□□□ -1.83
LINC01790-201ENST00000447194 P3H3Q8IVL6 736 aa3.65□□□□□ -1.83
LINC01790-201ENST00000447194 SPDYE16A6NNV3 312 aaPredicted RBP3.64□□□□□ -1.83
LINC01790-201ENST00000447194 CAMK2BQ13554 666 aa3.64□□□□□ -1.83
LINC01790-201ENST00000447194 MFRPQ9BY79 579 aa3.64□□□□□ -1.83
LINC01790-201ENST00000447194 TRIM35Q9UPQ4 493 aa3.64□□□□□ -1.83
LINC01790-201ENST00000447194 PCDHB8Q9UN66 801 aa3.64□□□□□ -1.83
LINC01790-201ENST00000447194 PLCG2P16885 1265 aa3.63□□□□□ -1.83
LINC01790-201ENST00000447194 SNPHO15079 494 aa3.63□□□□□ -1.83
LINC01790-201ENST00000447194 KDM6BO15054 1643 aa3.62□□□□□ -1.83
LINC01790-201ENST00000447194 NKX1-1Q15270 411 aaPredicted RBP3.62□□□□□ -1.83
LINC01790-201ENST00000447194 SPATA31D1Q6ZQQ2 1576 aa3.62□□□□□ -1.83
LINC01790-201ENST00000447194 ARHGEF1Q92888 912 aaKnown RBP3.61□□□□□ -1.83
LINC01790-201ENST00000447194 CRISPLD2Q9H0B8 497 aa3.61□□□□□ -1.83
LINC01790-201ENST00000447194 KIF3CO14782 793 aa3.61□□□□□ -1.83
LINC01790-201ENST00000447194 EFCAB3Q8N7B9 438 aa3.61□□□□□ -1.83
LINC01790-201ENST00000447194 G3V3G9 751 aa3.61□□□□□ -1.83
LINC01790-201ENST00000447194 PTGER2P43116 358 aa3.61□□□□□ -1.83
LINC01790-201ENST00000447194 PDCD7Q8N8D1 485 aaKnown RBP3.61□□□□□ -1.83
LINC01790-201ENST00000447194 BOLA1Q9Y3E2 137 aa3.61□□□□□ -1.83
LINC01790-201ENST00000447194 TBC1D12O60347 775 aa3.6□□□□□ -1.83
LINC01790-201ENST00000447194 GPHNQ9NQX3 736 aaPredicted RBP3.6□□□□□ -1.83
LINC01790-201ENST00000447194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.6□□□□□ -1.83
LINC01790-201ENST00000447194 DAXXQ9UER7 740 aaPredicted RBP3.6□□□□□ -1.83
LINC01790-201ENST00000447194 MYT1LQ9UL68 1186 aa3.6□□□□□ -1.83
LINC01790-201ENST00000447194 PSDA5PKW4 1024 aaPredicted RBP3.59□□□□□ -1.83
LINC01790-201ENST00000447194 MS4A4AQ96JQ5 239 aa3.59□□□□□ -1.83
LINC01790-201ENST00000447194 CABP2Q9NPB3 220 aa3.59□□□□□ -1.83
LINC01790-201ENST00000447194 SHROOM4Q9ULL8 1493 aa3.59□□□□□ -1.83
LINC01790-201ENST00000447194 ONECUT3O60422 494 aaPredicted RBP3.59□□□□□ -1.84
LINC01790-201ENST00000447194 FOXK1P85037 733 aa3.59□□□□□ -1.84
LINC01790-201ENST00000447194 PAXIP1Q6ZW49 1069 aaPredicted RBP3.58□□□□□ -1.84
LINC01790-201ENST00000447194 SMYD5Q6GMV2 418 aa3.57□□□□□ -1.84
LINC01790-201ENST00000447194 MICALL2Q8IY33 904 aa3.57□□□□□ -1.84
LINC01790-201ENST00000447194 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.57□□□□□ -1.84
LINC01790-201ENST00000447194 PHF8Q9UPP1 1060 aa3.57□□□□□ -1.84
LINC01790-201ENST00000447194 PTCD2Q8WV60 388 aaKnown RBP3.56□□□□□ -1.84
LINC01790-201ENST00000447194 WDR70Q9NW82 654 aa3.56□□□□□ -1.84
LINC01790-201ENST00000447194 ANO8Q9HCE9 1232 aaPredicted RBP3.56□□□□□ -1.84
LINC01790-201ENST00000447194 DOK7Q18PE1 504 aa3.55□□□□□ -1.84
LINC01790-201ENST00000447194 TMC2Q8TDI7 906 aa3.55□□□□□ -1.84
LINC01790-201ENST00000447194 BCANQ96GW7 911 aa3.54□□□□□ -1.84
LINC01790-201ENST00000447194 EPAS1Q99814 870 aa3.54□□□□□ -1.84
LINC01790-201ENST00000447194 ZNF316A6NFI3 1004 aaPredicted RBP3.54□□□□□ -1.84
LINC01790-201ENST00000447194 TULP1O00294 542 aaPredicted RBP3.53□□□□□ -1.84
LINC01790-201ENST00000447194 DCAF8L2P0C7V8 631 aa3.53□□□□□ -1.84
LINC01790-201ENST00000447194 RIMBP2O15034 1052 aa3.53□□□□□ -1.85
LINC01790-201ENST00000447194 OXER1Q8TDS5 423 aa3.53□□□□□ -1.85
LINC01790-201ENST00000447194 DDX27Q96GQ7 796 aaKnown RBP3.53□□□□□ -1.85
LINC01790-201ENST00000447194 SLC4A5Q9BY07 1137 aa3.53□□□□□ -1.85
LINC01790-201ENST00000447194 PLA2G2EQ9NZK7 142 aa3.53□□□□□ -1.85
LINC01790-201ENST00000447194 BICRAQ9NZM4 1560 aa3.53□□□□□ -1.85
LINC01790-201ENST00000447194 HAP1P54257 671 aaPredicted RBP3.52□□□□□ -1.85
LINC01790-201ENST00000447194 E2F4Q16254 413 aa3.52□□□□□ -1.85
LINC01790-201ENST00000447194 PPP1R15BQ5SWA1 713 aa3.51□□□□□ -1.85
LINC01790-201ENST00000447194 CERKQ8TCT0 537 aa3.51□□□□□ -1.85
LINC01790-201ENST00000447194 CFAP44Q96MT7 982 aa3.51□□□□□ -1.85
LINC01790-201ENST00000447194 KDM4FA0A1W2PPD8 638 aa3.51□□□□□ -1.85
LINC01790-201ENST00000447194 C3orf67Q6ZVT6 689 aa3.51□□□□□ -1.85
LINC01790-201ENST00000447194 RBM27Q9P2N5 1060 aaKnown RBP3.51□□□□□ -1.85
LINC01790-201ENST00000447194 NCKAP5LQ9HCH0 1330 aa3.5□□□□□ -1.85
LINC01790-201ENST00000447194 FBXW7Q969H0 707 aa3.5□□□□□ -1.85
LINC01790-201ENST00000447194 PDIA6Q15084 440 aa3.5□□□□□ -1.85
LINC01790-201ENST00000447194 ERBB3P21860 1342 aa3.5□□□□□ -1.85
LINC01790-201ENST00000447194 PBX2P40425 430 aa3.49□□□□□ -1.85
LINC01790-201ENST00000447194 TESPA1A2RU30 521 aaPredicted RBP3.49□□□□□ -1.85
LINC01790-201ENST00000447194 PPP1R37O75864 691 aa3.49□□□□□ -1.85
LINC01790-201ENST00000447194 PHF14O94880 888 aa3.49□□□□□ -1.85
LINC01790-201ENST00000447194 TSHZ2Q9NRE2 1034 aa3.49□□□□□ -1.85
LINC01790-201ENST00000447194 VARS2Q5ST30 1063 aaKnown RBP3.49□□□□□ -1.85
LINC01790-201ENST00000447194 ILDR2Q71H61 639 aa3.49□□□□□ -1.85
LINC01790-201ENST00000447194 HOXB1P14653 301 aaPredicted RBP3.48□□□□□ -1.85
LINC01790-201ENST00000447194 ANKRD13DQ6ZTN6 518 aa3.48□□□□□ -1.85
LINC01790-201ENST00000447194 PLPP6Q8IY26 295 aa3.46□□□□□ -1.85
LINC01790-201ENST00000447194 JPH4Q96JJ6 628 aa3.46□□□□□ -1.85
LINC01790-201ENST00000447194 CADPS2Q86UW7 1296 aa3.46□□□□□ -1.86
LINC01790-201ENST00000447194 KDM2AQ9Y2K7 1162 aa3.46□□□□□ -1.86
LINC01790-201ENST00000447194 LARP6Q9BRS8 491 aaKnown RBP3.45□□□□□ -1.86
LINC01790-201ENST00000447194 TYW1BQ6NUM6 668 aa3.45□□□□□ -1.86
LINC01790-201ENST00000447194 NECTIN2Q92692 538 aa3.45□□□□□ -1.86
LINC01790-201ENST00000447194 IRX2Q9BZI1 471 aaPredicted RBP3.45□□□□□ -1.86
LINC01790-201ENST00000447194 PCDHGA4Q9Y5G9 962 aa3.45□□□□□ -1.86
LINC01790-201ENST00000447194 C2orf72A6NCS6 295 aa3.44□□□□□ -1.86
LINC01790-201ENST00000447194 TK2O00142 265 aa3.44□□□□□ -1.86
LINC01790-201ENST00000447194 HOXB3P14651 431 aaPredicted RBP3.44□□□□□ -1.86
LINC01790-201ENST00000447194 NBR1Q14596 966 aa3.44□□□□□ -1.86
LINC01790-201ENST00000447194 DSG2Q14126 1118 aa3.44□□□□□ -1.86
LINC01790-201ENST00000447194 ZNF710Q8N1W2 664 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms