RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 ANP32BQ92688 251 aaKnown RBP11.5□□□□□ -0.57
MCF2L2-203ENST00000447025 FKBP8Q14318 412 aa11.49□□□□□ -0.57
MCF2L2-203ENST00000447025 HDAC5Q9UQL6 1122 aa11.49□□□□□ -0.57
MCF2L2-203ENST00000447025 FBLN2P98095 1184 aa11.49□□□□□ -0.57
MCF2L2-203ENST00000447025 AXDND1Q5T1B0 1012 aaPredicted RBP11.49□□□□□ -0.57
MCF2L2-203ENST00000447025 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
MCF2L2-203ENST00000447025 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
MCF2L2-203ENST00000447025 EIF4G1Q04637 1599 aaKnown RBP11.48□□□□□ -0.57
MCF2L2-203ENST00000447025 SMAP1Q8IYB5 467 aaPredicted RBP11.46□□□□□ -0.58
MCF2L2-203ENST00000447025 SLC52A1Q9NWF4 448 aa11.46□□□□□ -0.58
MCF2L2-203ENST00000447025 DNAJC2Q99543 621 aaKnown RBP11.45□□□□□ -0.58
MCF2L2-203ENST00000447025 PSEN1P49768 467 aa11.44□□□□□ -0.58
MCF2L2-203ENST00000447025 UTP14CQ5TAP6 766 aaKnown RBP11.42□□□□□ -0.58
MCF2L2-203ENST00000447025 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
MCF2L2-203ENST00000447025 VGLL3A8MV65 326 aa11.41□□□□□ -0.58
MCF2L2-203ENST00000447025 ANAPC15P60006 121 aa11.41□□□□□ -0.58
MCF2L2-203ENST00000447025 CWC22Q9HCG8 908 aaKnown RBP11.41□□□□□ -0.58
MCF2L2-203ENST00000447025 OS9Q13438 667 aaPredicted RBP11.41□□□□□ -0.58
MCF2L2-203ENST00000447025 SENP3Q9H4L4 574 aaPredicted RBP11.4□□□□□ -0.58
MCF2L2-203ENST00000447025 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
MCF2L2-203ENST00000447025 APPP05067 770 aa11.4□□□□□ -0.58
MCF2L2-203ENST00000447025 GSE1Q14687 1217 aa11.39□□□□□ -0.59
MCF2L2-203ENST00000447025 MAFGO15525 162 aa11.39□□□□□ -0.59
MCF2L2-203ENST00000447025 GPATCH11Q8N954 259 aa11.39□□□□□ -0.59
MCF2L2-203ENST00000447025 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
MCF2L2-203ENST00000447025 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
MCF2L2-203ENST00000447025 ITGAEP38570 1179 aa11.36□□□□□ -0.59
MCF2L2-203ENST00000447025 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
MCF2L2-203ENST00000447025 SOX12O15370 315 aa11.35□□□□□ -0.59
MCF2L2-203ENST00000447025 ADRA2BP18089 450 aa11.35□□□□□ -0.59
MCF2L2-203ENST00000447025 IPO9Q96P70 1041 aaKnown RBP11.34□□□□□ -0.59
MCF2L2-203ENST00000447025 PNNQ9H307 717 aaKnown RBP11.33□□□□□ -0.6
MCF2L2-203ENST00000447025 CEP120Q8N960 986 aa11.32□□□□□ -0.6
MCF2L2-203ENST00000447025 TRIM44Q96DX7 344 aaPredicted RBP11.32□□□□□ -0.6
MCF2L2-203ENST00000447025 RRAGDQ9NQL2 400 aaPredicted RBP11.32□□□□□ -0.6
MCF2L2-203ENST00000447025 CARD10Q9BWT7 1032 aa11.31□□□□□ -0.6
MCF2L2-203ENST00000447025 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
MCF2L2-203ENST00000447025 TPM2P07951 284 aa11.31□□□□□ -0.6
MCF2L2-203ENST00000447025 NBPF20Q3BBV1 942 aa11.31□□□□□ -0.6
MCF2L2-203ENST00000447025 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
MCF2L2-203ENST00000447025 MAPK8IP2Q13387 824 aaPredicted RBP11.3□□□□□ -0.6
MCF2L2-203ENST00000447025 MAP7D2Q96T17 732 aa11.3□□□□□ -0.6
MCF2L2-203ENST00000447025 DMTNQ08495 405 aa11.29□□□□□ -0.6
MCF2L2-203ENST00000447025 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
MCF2L2-203ENST00000447025 TAF3Q5VWG9 929 aa11.29□□□□□ -0.6
MCF2L2-203ENST00000447025 EGFL6Q8IUX8 553 aa11.29□□□□□ -0.6
MCF2L2-203ENST00000447025 CLCN1P35523 988 aa11.28□□□□□ -0.6
MCF2L2-203ENST00000447025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.6
MCF2L2-203ENST00000447025 KIF20AO95235 890 aa11.27□□□□□ -0.6
MCF2L2-203ENST00000447025 SH3BP1Q9Y3L3 701 aa11.27□□□□□ -0.6
MCF2L2-203ENST00000447025 SLC20A2Q08357 652 aa11.27□□□□□ -0.61
MCF2L2-203ENST00000447025 ANP32AP39687 249 aaKnown RBP11.26□□□□□ -0.61
MCF2L2-203ENST00000447025 DNTTIP2Q5QJE6 756 aaKnown RBP11.25□□□□□ -0.61
MCF2L2-203ENST00000447025 TNNT2P45379 298 aaPredicted RBP11.25□□□□□ -0.61
MCF2L2-203ENST00000447025 CCDC27Q2M243 656 aa11.25□□□□□ -0.61
MCF2L2-203ENST00000447025 RALBP1Q15311 655 aa11.24□□□□□ -0.61
MCF2L2-203ENST00000447025 NBPF11Q86T75 865 aa11.24□□□□□ -0.61
MCF2L2-203ENST00000447025 YY1AP1Q9H869 796 aa11.24□□□□□ -0.61
MCF2L2-203ENST00000447025 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
MCF2L2-203ENST00000447025 NBPF1Q3BBV0 1214 aa11.23□□□□□ -0.61
MCF2L2-203ENST00000447025 TTC36A6NLP5 189 aa11.23□□□□□ -0.61
MCF2L2-203ENST00000447025 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
MCF2L2-203ENST00000447025 NGEFQ8N5V2 710 aa11.21□□□□□ -0.61
MCF2L2-203ENST00000447025 GEMIN8Q9NWZ8 242 aaKnown RBP11.21□□□□□ -0.61
MCF2L2-203ENST00000447025 ERCC6Q03468 1493 aa11.21□□□□□ -0.62
MCF2L2-203ENST00000447025 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
MCF2L2-203ENST00000447025 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
MCF2L2-203ENST00000447025 DCAF11Q8TEB1 546 aa11.2□□□□□ -0.62
MCF2L2-203ENST00000447025 FRAT1Q92837 279 aaPredicted RBP11.2□□□□□ -0.62
MCF2L2-203ENST00000447025 ZBTB7CA1YPR0 619 aa11.19□□□□□ -0.62
MCF2L2-203ENST00000447025 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
MCF2L2-203ENST00000447025 E9PSI1 815 aa11.18□□□□□ -0.62
MCF2L2-203ENST00000447025 IRF6O14896 467 aa11.17□□□□□ -0.62
MCF2L2-203ENST00000447025 SEMA3FQ13275 785 aa11.17□□□□□ -0.62
MCF2L2-203ENST00000447025 CDCA8Q53HL2 280 aa11.17□□□□□ -0.62
MCF2L2-203ENST00000447025 HSP90AB3PQ58FF7 597 aa11.17□□□□□ -0.62
MCF2L2-203ENST00000447025 LETM1O95202 739 aaPredicted RBP11.17□□□□□ -0.62
MCF2L2-203ENST00000447025 FAM177A1Q8N128 213 aaPredicted RBP11.17□□□□□ -0.62
MCF2L2-203ENST00000447025 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
MCF2L2-203ENST00000447025 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
MCF2L2-203ENST00000447025 GTPBP4Q9BZE4 634 aaKnown RBP11.16□□□□□ -0.62
MCF2L2-203ENST00000447025 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
MCF2L2-203ENST00000447025 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.14□□□□□ -0.63
MCF2L2-203ENST00000447025 MTERF4Q7Z6M4 381 aaKnown RBP11.13□□□□□ -0.63
MCF2L2-203ENST00000447025 GOLGA6L3A6NEY3 463 aa11.13□□□□□ -0.63
MCF2L2-203ENST00000447025 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
MCF2L2-203ENST00000447025 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
MCF2L2-203ENST00000447025 NBPF9Q3BBW0 867 aa11.12□□□□□ -0.63
MCF2L2-203ENST00000447025 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
MCF2L2-203ENST00000447025 ZSCAN20P17040 1043 aaPredicted RBP11.12□□□□□ -0.63
MCF2L2-203ENST00000447025 ZNF428Q96B54 188 aa11.12□□□□□ -0.63
MCF2L2-203ENST00000447025 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
MCF2L2-203ENST00000447025 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
MCF2L2-203ENST00000447025 WIZO95785 1651 aa11.09□□□□□ -0.63
MCF2L2-203ENST00000447025 CASC1Q6TDU7 716 aa11.09□□□□□ -0.63
MCF2L2-203ENST00000447025 OTUD6BQ8N6M0 293 aa11.09□□□□□ -0.63
MCF2L2-203ENST00000447025 MPNDQ8N594 471 aa11.09□□□□□ -0.63
MCF2L2-203ENST00000447025 KDM4AO75164 1064 aa11.08□□□□□ -0.64
MCF2L2-203ENST00000447025 AEBP1Q8IUX7 1158 aa11.07□□□□□ -0.64
MCF2L2-203ENST00000447025 BANK1Q8NDB2 785 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms