RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 IGF1RP08069 1367 aa10.32□□□□□ -0.76
HMGN1P36-201ENST00000446623 GABBR2O75899 941 aa10.32□□□□□ -0.76
HMGN1P36-201ENST00000446623 PHF12Q96QT6 1004 aa10.31□□□□□ -0.76
HMGN1P36-201ENST00000446623 NUBP1P53384 320 aa10.3□□□□□ -0.76
HMGN1P36-201ENST00000446623 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
HMGN1P36-201ENST00000446623 ZNF579Q8NAF0 562 aaKnown RBP10.3□□□□□ -0.76
HMGN1P36-201ENST00000446623 KIF27Q86VH2 1401 aa10.3□□□□□ -0.76
HMGN1P36-201ENST00000446623 PTPRGP23470 1445 aa10.29□□□□□ -0.76
HMGN1P36-201ENST00000446623 ABCC2Q92887 1545 aa10.27□□□□□ -0.77
HMGN1P36-201ENST00000446623 PPRC1Q5VV67 1664 aaKnown RBP10.25□□□□□ -0.77
HMGN1P36-201ENST00000446623 GLI2P10070 1586 aa10.25□□□□□ -0.77
HMGN1P36-201ENST00000446623 TTBK1Q5TCY1 1321 aaPredicted RBP10.25□□□□□ -0.77
HMGN1P36-201ENST00000446623 TNIKQ9UKE5 1360 aa10.25□□□□□ -0.77
HMGN1P36-201ENST00000446623 CARMIL2Q6F5E8 1435 aa10.24□□□□□ -0.77
HMGN1P36-201ENST00000446623 ASXL2Q76L83 1435 aa10.24□□□□□ -0.77
HMGN1P36-201ENST00000446623 PLB1Q6P1J6 1458 aa10.24□□□□□ -0.77
HMGN1P36-201ENST00000446623 IQGAP2Q13576 1575 aa10.24□□□□□ -0.77
HMGN1P36-201ENST00000446623 CCDC61Q9Y6R9 512 aa10.24□□□□□ -0.77
HMGN1P36-201ENST00000446623 CARMIL1Q5VZK9 1371 aa10.23□□□□□ -0.77
HMGN1P36-201ENST00000446623 UHRF1BP1LA0JNW5 1464 aa10.23□□□□□ -0.77
HMGN1P36-201ENST00000446623 GALR2O43603 387 aaPredicted RBP10.22□□□□□ -0.77
HMGN1P36-201ENST00000446623 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
HMGN1P36-201ENST00000446623 FAM212AQ96EL1 285 aa10.22□□□□□ -0.77
HMGN1P36-201ENST00000446623 ADGRL1O94910 1474 aa10.22□□□□□ -0.77
HMGN1P36-201ENST00000446623 DISP1Q96F81 1524 aa10.21□□□□□ -0.78
HMGN1P36-201ENST00000446623 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
HMGN1P36-201ENST00000446623 UACAQ9BZF9 1416 aa10.2□□□□□ -0.78
HMGN1P36-201ENST00000446623 COL17A1Q9UMD9 1497 aaPredicted RBP10.2□□□□□ -0.78
HMGN1P36-201ENST00000446623 MAP3K4Q9Y6R4 1608 aa10.19□□□□□ -0.78
HMGN1P36-201ENST00000446623 EPRSP07814 1512 aaKnown RBP10.19□□□□□ -0.78
HMGN1P36-201ENST00000446623 KDM5BQ9UGL1 1544 aa10.18□□□□□ -0.78
HMGN1P36-201ENST00000446623 SPOCK2Q92563 424 aa10.18□□□□□ -0.78
HMGN1P36-201ENST00000446623 MS4A3Q96HJ5 214 aa10.17□□□□□ -0.78
HMGN1P36-201ENST00000446623 ZCCHC11Q5TAX3 1644 aaKnown RBP10.17□□□□□ -0.78
HMGN1P36-201ENST00000446623 TEX14Q8IWB6 1497 aa10.17□□□□□ -0.78
HMGN1P36-201ENST00000446623 CLCN6P51797 869 aa10.16□□□□□ -0.78
HMGN1P36-201ENST00000446623 KIF12Q96FN5 646 aa10.16□□□□□ -0.78
HMGN1P36-201ENST00000446623 UGGT2Q9NYU1 1516 aa10.16□□□□□ -0.78
HMGN1P36-201ENST00000446623 MAP3K13O43283 966 aa10.15□□□□□ -0.78
HMGN1P36-201ENST00000446623 KIAA0556O60303 1618 aa10.15□□□□□ -0.79
HMGN1P36-201ENST00000446623 HECW2Q9P2P5 1572 aa10.14□□□□□ -0.79
HMGN1P36-201ENST00000446623 RAPGEF2Q9Y4G8 1499 aa10.13□□□□□ -0.79
HMGN1P36-201ENST00000446623 PYGBP11216 843 aa10.13□□□□□ -0.79
HMGN1P36-201ENST00000446623 DCBLD2Q96PD2 775 aa10.13□□□□□ -0.79
HMGN1P36-201ENST00000446623 WDR7Q9Y4E6 1490 aa10.12□□□□□ -0.79
HMGN1P36-201ENST00000446623 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
HMGN1P36-201ENST00000446623 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
HMGN1P36-201ENST00000446623 GSE1Q14687 1217 aa10.1□□□□□ -0.79
HMGN1P36-201ENST00000446623 CFAP43Q8NDM7 1665 aa10.09□□□□□ -0.79
HMGN1P36-201ENST00000446623 MAGI3Q5TCQ9 1506 aa10.08□□□□□ -0.8
HMGN1P36-201ENST00000446623 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
HMGN1P36-201ENST00000446623 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
HMGN1P36-201ENST00000446623 CTTNBP2Q8WZ74 1663 aa10.08□□□□□ -0.8
HMGN1P36-201ENST00000446623 CD109Q6YHK3 1445 aa10.07□□□□□ -0.8
HMGN1P36-201ENST00000446623 ABCA8O94911 1581 aa10.06□□□□□ -0.8
HMGN1P36-201ENST00000446623 GOLGA3Q08378 1498 aa10.05□□□□□ -0.8
HMGN1P36-201ENST00000446623 KIF21BO75037 1637 aa10.04□□□□□ -0.8
HMGN1P36-201ENST00000446623 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
HMGN1P36-201ENST00000446623 KCNH8Q96L42 1107 aa10.04□□□□□ -0.8
HMGN1P36-201ENST00000446623 PCDHB8Q9UN66 801 aa10.01□□□□□ -0.81
HMGN1P36-201ENST00000446623 ARAP3Q8WWN8 1544 aa10.01□□□□□ -0.81
HMGN1P36-201ENST00000446623 SGIP1Q9BQI5 828 aa10□□□□□ -0.81
HMGN1P36-201ENST00000446623 ATMINO43313 823 aaPredicted RBP9.99□□□□□ -0.81
HMGN1P36-201ENST00000446623 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
HMGN1P36-201ENST00000446623 BMP2KQ9NSY1 1161 aaPredicted RBP9.99□□□□□ -0.81
HMGN1P36-201ENST00000446623 PRXQ9BXM0 1461 aa9.98□□□□□ -0.81
HMGN1P36-201ENST00000446623 ABCA9Q8IUA7 1624 aa9.98□□□□□ -0.81
HMGN1P36-201ENST00000446623 ARID3CA6NKF2 412 aa9.97□□□□□ -0.81
HMGN1P36-201ENST00000446623 ATN1P54259 1190 aaPredicted RBP9.97□□□□□ -0.81
HMGN1P36-201ENST00000446623 ASTLQ6HA08 431 aaPredicted RBP9.97□□□□□ -0.81
HMGN1P36-201ENST00000446623 ATP10BO94823 1461 aa9.97□□□□□ -0.81
HMGN1P36-201ENST00000446623 ADAMTSL3P82987 1691 aa9.96□□□□□ -0.81
HMGN1P36-201ENST00000446623 PTPRMP28827 1452 aa9.96□□□□□ -0.82
HMGN1P36-201ENST00000446623 CHRM1P11229 460 aaPredicted RBP9.95□□□□□ -0.82
HMGN1P36-201ENST00000446623 TIE1P35590 1138 aa9.95□□□□□ -0.82
HMGN1P36-201ENST00000446623 PHLDB1Q86UU1 1377 aa9.95□□□□□ -0.82
HMGN1P36-201ENST00000446623 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
HMGN1P36-201ENST00000446623 P3H3Q8IVL6 736 aa9.94□□□□□ -0.82
HMGN1P36-201ENST00000446623 FBXO41Q8TF61 875 aa9.94□□□□□ -0.82
HMGN1P36-201ENST00000446623 SAMD9Q5K651 1589 aa9.93□□□□□ -0.82
HMGN1P36-201ENST00000446623 NEO1Q92859 1461 aa9.93□□□□□ -0.82
HMGN1P36-201ENST00000446623 RAPGEF3O95398 923 aa9.93□□□□□ -0.82
HMGN1P36-201ENST00000446623 FAM9AQ8IZU1 332 aaPredicted RBP9.93□□□□□ -0.82
HMGN1P36-201ENST00000446623 TMEM106CQ9BVX2 250 aa9.93□□□□□ -0.82
HMGN1P36-201ENST00000446623 FRMPD1Q5SYB0 1578 aa9.92□□□□□ -0.82
HMGN1P36-201ENST00000446623 BCORL1Q5H9F3 1711 aa9.92□□□□□ -0.82
HMGN1P36-201ENST00000446623 RAPGEF6Q8TEU7 1601 aa9.92□□□□□ -0.82
HMGN1P36-201ENST00000446623 MADDQ8WXG6 1647 aa9.92□□□□□ -0.82
HMGN1P36-201ENST00000446623 ZNF467Q7Z7K2 595 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P36-201ENST00000446623 PCF11O94913 1555 aaKnown RBP9.91□□□□□ -0.82
HMGN1P36-201ENST00000446623 LMTK3Q96Q04 1460 aa9.9□□□□□ -0.83
HMGN1P36-201ENST00000446623 TRIM35Q9UPQ4 493 aa9.89□□□□□ -0.83
HMGN1P36-201ENST00000446623 NUP153P49790 1475 aaKnown RBP9.89□□□□□ -0.83
HMGN1P36-201ENST00000446623 ARID4BQ4LE39 1312 aaPredicted RBP9.88□□□□□ -0.83
HMGN1P36-201ENST00000446623 ARHGEF40Q8TER5 1519 aa9.88□□□□□ -0.83
HMGN1P36-201ENST00000446623 RIMS1Q86UR5 1692 aaKnown RBP9.88□□□□□ -0.83
HMGN1P36-201ENST00000446623 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
HMGN1P36-201ENST00000446623 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
HMGN1P36-201ENST00000446623 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
HMGN1P36-201ENST00000446623 PSEN1P49768 467 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms