RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 UACAQ9BZF9 1416 aa14.99□□□□□ -0.01
FN1-212ENST00000446046 MORC1Q86VD1 984 aa14.98□□□□□ -0.01
FN1-212ENST00000446046 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
FN1-212ENST00000446046 CSB-PGBD3P0DP91 1061 aa14.96□□□□□ -0.01
FN1-212ENST00000446046 IPO8O15397 1037 aaKnown RBP14.96□□□□□ -0.01
FN1-212ENST00000446046 L1TD1Q5T7N2 865 aaKnown RBP14.95□□□□□ -0.02
FN1-212ENST00000446046 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
FN1-212ENST00000446046 NEUROD2Q15784 382 aa14.95□□□□□ -0.02
FN1-212ENST00000446046 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
FN1-212ENST00000446046 ROCK2O75116 1388 aaKnown RBP14.93□□□□□ -0.02
FN1-212ENST00000446046 SETD5Q9C0A6 1442 aa14.93□□□□□ -0.02
FN1-212ENST00000446046 PTMAP06454 111 aaKnown RBP14.93□□□□□ -0.02
FN1-212ENST00000446046 GPATCH3Q96I76 525 aa14.93□□□□□ -0.02
FN1-212ENST00000446046 MROH2BQ7Z745 1585 aa14.92□□□□□ -0.02
FN1-212ENST00000446046 NAP1L2Q9ULW6 460 aaPredicted RBP14.92□□□□□ -0.02
FN1-212ENST00000446046 HIRIP3Q9BW71 556 aaPredicted RBP14.91□□□□□ -0.02
FN1-212ENST00000446046 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
FN1-212ENST00000446046 CCDC9Q9Y3X0 531 aaKnown RBP14.91□□□□□ -0.02
FN1-212ENST00000446046 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
FN1-212ENST00000446046 KTN1Q86UP2 1357 aaKnown RBP14.91□□□□□ -0.02
FN1-212ENST00000446046 G3V3G9 751 aa14.91□□□□□ -0.02
FN1-212ENST00000446046 DCAF8Q5TAQ9 597 aa14.91□□□□□ -0.02
FN1-212ENST00000446046 KIAA1211Q6ZU35 1233 aa14.9□□□□□ -0.02
FN1-212ENST00000446046 STK26Q9P289 416 aa14.9□□□□□ -0.02
FN1-212ENST00000446046 VPS8Q8N3P4 1428 aa14.9□□□□□ -0.02
FN1-212ENST00000446046 WASHC2CQ9Y4E1 1318 aa14.9□□□□□ -0.02
FN1-212ENST00000446046 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
FN1-212ENST00000446046 GOLGA6L4A6NEF3 574 aa14.89□□□□□ -0.03
FN1-212ENST00000446046 HSP90AB1P08238 724 aaKnown RBP14.89□□□□□ -0.03
FN1-212ENST00000446046 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
FN1-212ENST00000446046 SOX12O15370 315 aa14.88□□□□□ -0.03
FN1-212ENST00000446046 ISY1Q9ULR0 285 aaKnown RBP14.88□□□□□ -0.03
FN1-212ENST00000446046 GNL2Q13823 731 aaKnown RBP14.88□□□□□ -0.03
FN1-212ENST00000446046 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
FN1-212ENST00000446046 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
FN1-212ENST00000446046 NUP155O75694 1391 aa14.86□□□□□ -0.03
FN1-212ENST00000446046 CCDC34Q96HJ3 373 aa14.86□□□□□ -0.03
FN1-212ENST00000446046 NBR1Q14596 966 aa14.86□□□□□ -0.03
FN1-212ENST00000446046 TAF7LQ5H9L4 462 aa14.85□□□□□ -0.03
FN1-212ENST00000446046 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
FN1-212ENST00000446046 CLSTN1O94985 981 aa14.84□□□□□ -0.03
FN1-212ENST00000446046 KIAA2012Q0VF49 1180 aa14.84□□□□□ -0.03
FN1-212ENST00000446046 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
FN1-212ENST00000446046 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.03
FN1-212ENST00000446046 DNTTIP2Q5QJE6 756 aaKnown RBP14.83□□□□□ -0.03
FN1-212ENST00000446046 CHAF1AQ13111 956 aaPredicted RBP14.83□□□□□ -0.04
FN1-212ENST00000446046 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
FN1-212ENST00000446046 STK31Q9BXU1 1019 aa14.83□□□□□ -0.04
FN1-212ENST00000446046 KIF3BO15066 747 aa14.82□□□□□ -0.04
FN1-212ENST00000446046 PKD2Q13563 968 aa14.82□□□□□ -0.04
FN1-212ENST00000446046 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
FN1-212ENST00000446046 GORABQ5T7V8 394 aa14.82□□□□□ -0.04
FN1-212ENST00000446046 HSCBQ8IWL3 235 aa14.81□□□□□ -0.04
FN1-212ENST00000446046 PTMSP20962 102 aa14.8□□□□□ -0.04
FN1-212ENST00000446046 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
FN1-212ENST00000446046 RALBP1Q15311 655 aa14.8□□□□□ -0.04
FN1-212ENST00000446046 CUX1P39880 1505 aa14.79□□□□□ -0.04
FN1-212ENST00000446046 JPH4Q96JJ6 628 aa14.79□□□□□ -0.04
FN1-212ENST00000446046 EVA1CP58658 441 aa14.79□□□□□ -0.04
FN1-212ENST00000446046 PHLDB1Q86UU1 1377 aa14.79□□□□□ -0.04
FN1-212ENST00000446046 AMPHP49418 695 aa14.79□□□□□ -0.04
FN1-212ENST00000446046 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
FN1-212ENST00000446046 MIER1Q8N108 512 aa14.78□□□□□ -0.04
FN1-212ENST00000446046 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.04
FN1-212ENST00000446046 GTF2E1P29083 439 aaPredicted RBP14.77□□□□□ -0.05
FN1-212ENST00000446046 IRX6P78412 446 aaPredicted RBP14.77□□□□□ -0.05
FN1-212ENST00000446046 HMMRO75330 724 aa14.77□□□□□ -0.05
FN1-212ENST00000446046 ZNF330Q9Y3S2 320 aaPredicted RBP14.76□□□□□ -0.05
FN1-212ENST00000446046 TAOK2Q9UL54 1235 aa14.75□□□□□ -0.05
FN1-212ENST00000446046 MEX3CQ5U5Q3 659 aaKnown RBP14.75□□□□□ -0.05
FN1-212ENST00000446046 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
FN1-212ENST00000446046 U2AF1L5P0DN76 240 aaPredicted RBP14.74□□□□□ -0.05
FN1-212ENST00000446046 U2AF1Q01081 240 aaKnown RBP eCLIP14.74□□□□□ -0.052e-9■■□□□ 12.6
FN1-212ENST00000446046 LRRFIP1Q32MZ4 808 aaKnown RBP14.74□□□□□ -0.05
FN1-212ENST00000446046 CCDC144AA2RUR9 1427 aa14.74□□□□□ -0.05
FN1-212ENST00000446046 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
FN1-212ENST00000446046 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
FN1-212ENST00000446046 CHMP4CQ96CF2 233 aa14.73□□□□□ -0.05
FN1-212ENST00000446046 CHMP3Q9Y3E7 222 aa14.73□□□□□ -0.05
FN1-212ENST00000446046 VGFO15240 615 aaPredicted RBP14.73□□□□□ -0.05
FN1-212ENST00000446046 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
FN1-212ENST00000446046 PTPRGP23470 1445 aa14.72□□□□□ -0.05
FN1-212ENST00000446046 MPHOSPH9Q99550 1183 aa14.72□□□□□ -0.05
FN1-212ENST00000446046 C1orf141Q5JVX7 400 aa14.71□□□□□ -0.05
FN1-212ENST00000446046 WASHC2AQ641Q2 1341 aa14.71□□□□□ -0.05
FN1-212ENST00000446046 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.71□□□□□ -0.06
FN1-212ENST00000446046 RGS3P49796 1198 aa14.7□□□□□ -0.06
FN1-212ENST00000446046 KIF3AQ9Y496 699 aa14.7□□□□□ -0.06
FN1-212ENST00000446046 FRAT2O75474 233 aaPredicted RBP14.69□□□□□ -0.06
FN1-212ENST00000446046 FOXD1Q16676 465 aa14.69□□□□□ -0.06
FN1-212ENST00000446046 CSPP1Q1MSJ5 1256 aa14.69□□□□□ -0.06
FN1-212ENST00000446046 CCER2I3L3R5 266 aa14.68□□□□□ -0.06
FN1-212ENST00000446046 HNRNPMP52272 730 aaKnown RBP eCLIP14.68□□□□□ -0.06
FN1-212ENST00000446046 EVC2Q86UK5 1308 aa14.68□□□□□ -0.06
FN1-212ENST00000446046 TPM4P67936 248 aa14.68□□□□□ -0.06
FN1-212ENST00000446046 SIN3AQ96ST3 1273 aa14.68□□□□□ -0.06
FN1-212ENST00000446046 PLCB2Q00722 1185 aa14.68□□□□□ -0.06
FN1-212ENST00000446046 PMFBP1Q8TBY8 1022 aa14.68□□□□□ -0.06
FN1-212ENST00000446046 RWDD1Q9H446 243 aaPredicted RBP14.67□□□□□ -0.06
FN1-212ENST00000446046 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms