RNA–Protein interactions for RNA: ENST00000444900.1

LINC01553-202, Transcript of long intergenic non-protein coding RNA 1553, humanhuman

TSL 1 (best)

Gene LINC01553, Length 1,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553-202ENST00000444900 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
LINC01553-202ENST00000444900 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
LINC01553-202ENST00000444900 C3orf67Q6ZVT6 689 aa8.89□□□□□ -0.99
LINC01553-202ENST00000444900 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
LINC01553-202ENST00000444900 MARVELD3Q96A59 401 aa8.88□□□□□ -0.99
LINC01553-202ENST00000444900 GTF3C3Q9Y5Q9 886 aa8.87□□□□□ -0.99
LINC01553-202ENST00000444900 P3H3Q8IVL6 736 aa8.87□□□□□ -0.99
LINC01553-202ENST00000444900 TIMELESSQ9UNS1 1208 aa8.87□□□□□ -0.99
LINC01553-202ENST00000444900 CADPS2Q86UW7 1296 aa8.86□□□□□ -0.99
LINC01553-202ENST00000444900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
LINC01553-202ENST00000444900 PSEN1P49768 467 aa8.83□□□□□ -1
LINC01553-202ENST00000444900 EMP3P54852 163 aa8.83□□□□□ -1
LINC01553-202ENST00000444900 KCNV2Q8TDN2 545 aa8.83□□□□□ -1
LINC01553-202ENST00000444900 PDAP1Q13442 181 aaKnown RBP8.8□□□□□ -1
LINC01553-202ENST00000444900 ILDR1Q86SU0 546 aaPredicted RBP8.8□□□□□ -1
LINC01553-202ENST00000444900 LMOD2Q6P5Q4 547 aa8.79□□□□□ -1
LINC01553-202ENST00000444900 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1
LINC01553-202ENST00000444900 HS3ST6Q96QI5 342 aa8.77□□□□□ -1
LINC01553-202ENST00000444900 TMEM132AQ24JP5 1023 aa8.76□□□□□ -1.01
LINC01553-202ENST00000444900 MFRPQ9BY79 579 aa8.76□□□□□ -1.01
LINC01553-202ENST00000444900 FAM205CA6NFA0 338 aa8.75□□□□□ -1.01
LINC01553-202ENST00000444900 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
LINC01553-202ENST00000444900 KRTAP3-2Q9BYR7 98 aa8.75□□□□□ -1.01
LINC01553-202ENST00000444900 POTEB3A0JP26 581 aa8.74□□□□□ -1.01
LINC01553-202ENST00000444900 POTEBQ6S5H4 581 aa8.74□□□□□ -1.01
LINC01553-202ENST00000444900 G3V3G9 751 aa8.73□□□□□ -1.01
LINC01553-202ENST00000444900 PPP1R37O75864 691 aa8.73□□□□□ -1.01
LINC01553-202ENST00000444900 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
LINC01553-202ENST00000444900 DPY19L2Q6NUT2 758 aa8.71□□□□□ -1.01
LINC01553-202ENST00000444900 CABP2Q9NPB3 220 aa8.71□□□□□ -1.01
LINC01553-202ENST00000444900 EFCAB3Q8N7B9 438 aa8.7□□□□□ -1.02
LINC01553-202ENST00000444900 HOXB3P14651 431 aaPredicted RBP8.68□□□□□ -1.02
LINC01553-202ENST00000444900 E2F4Q16254 413 aa8.68□□□□□ -1.02
LINC01553-202ENST00000444900 HOXB1P14653 301 aaPredicted RBP8.67□□□□□ -1.02
LINC01553-202ENST00000444900 ARHGEF1Q92888 912 aaKnown RBP8.67□□□□□ -1.02
LINC01553-202ENST00000444900 PHF8Q9UPP1 1060 aa8.67□□□□□ -1.02
LINC01553-202ENST00000444900 SEMA3EO15041 775 aa8.66□□□□□ -1.02
LINC01553-202ENST00000444900 ZNF710Q8N1W2 664 aa8.66□□□□□ -1.02
LINC01553-202ENST00000444900 NLRP6P59044 892 aa8.66□□□□□ -1.02
LINC01553-202ENST00000444900 DOK7Q18PE1 504 aa8.66□□□□□ -1.02
LINC01553-202ENST00000444900 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
LINC01553-202ENST00000444900 BRPF1P55201 1214 aaPredicted RBP8.64□□□□□ -1.03
LINC01553-202ENST00000444900 ERICH6Q7L0X2 663 aa8.64□□□□□ -1.03
LINC01553-202ENST00000444900 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
LINC01553-202ENST00000444900 FBXO22Q8NEZ5 403 aa8.64□□□□□ -1.03
LINC01553-202ENST00000444900 ERBB3P21860 1342 aa8.62□□□□□ -1.03
LINC01553-202ENST00000444900 RIMBP2O15034 1052 aa8.61□□□□□ -1.03
LINC01553-202ENST00000444900 SOX12O15370 315 aa8.61□□□□□ -1.03
LINC01553-202ENST00000444900 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
LINC01553-202ENST00000444900 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
LINC01553-202ENST00000444900 NEUROD2Q15784 382 aa8.61□□□□□ -1.03
LINC01553-202ENST00000444900 TESPA1A2RU30 521 aaPredicted RBP8.59□□□□□ -1.03
LINC01553-202ENST00000444900 NCKAP5LQ9HCH0 1330 aa8.58□□□□□ -1.04
LINC01553-202ENST00000444900 PDE4AP27815 886 aa8.57□□□□□ -1.04
LINC01553-202ENST00000444900 ZSWIM6Q9HCJ5 1215 aa8.57□□□□□ -1.04
LINC01553-202ENST00000444900 RNF166Q96A37 237 aaPredicted RBP8.55□□□□□ -1.04
LINC01553-202ENST00000444900 VARS2Q5ST30 1063 aaKnown RBP8.54□□□□□ -1.04
LINC01553-202ENST00000444900 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
LINC01553-202ENST00000444900 SMYD5Q6GMV2 418 aa8.53□□□□□ -1.04
LINC01553-202ENST00000444900 MS4A4AQ96JQ5 239 aa8.53□□□□□ -1.04
LINC01553-202ENST00000444900 DDX27Q96GQ7 796 aaKnown RBP8.52□□□□□ -1.04
LINC01553-202ENST00000444900 ZNF687Q8N1G0 1237 aa8.52□□□□□ -1.05
LINC01553-202ENST00000444900 TMEM92Q6UXU6 159 aa8.51□□□□□ -1.05
LINC01553-202ENST00000444900 ARXQ96QS3 562 aa8.51□□□□□ -1.05
LINC01553-202ENST00000444900 ZMYND10O75800 440 aa8.5□□□□□ -1.05
LINC01553-202ENST00000444900 MYT1LQ9UL68 1186 aa8.5□□□□□ -1.05
LINC01553-202ENST00000444900 PTGER2P43116 358 aa8.49□□□□□ -1.05
LINC01553-202ENST00000444900 GPR153Q6NV75 609 aa8.49□□□□□ -1.05
LINC01553-202ENST00000444900 CRISPLD2Q9H0B8 497 aa8.49□□□□□ -1.05
LINC01553-202ENST00000444900 MFSD10Q14728 455 aa8.48□□□□□ -1.05
LINC01553-202ENST00000444900 RBM26Q5T8P6 1007 aaKnown RBP8.46□□□□□ -1.06
LINC01553-202ENST00000444900 KRI1Q8N9T8 703 aaKnown RBP8.45□□□□□ -1.06
LINC01553-202ENST00000444900 SUPT5HO00267 1087 aaKnown RBP8.45□□□□□ -1.06
LINC01553-202ENST00000444900 MLLT3P42568 568 aaPredicted RBP8.45□□□□□ -1.06
LINC01553-202ENST00000444900 BARGINQ6ZT62 677 aa8.44□□□□□ -1.06
LINC01553-202ENST00000444900 CAMK2BQ13554 666 aa8.43□□□□□ -1.06
LINC01553-202ENST00000444900 GPIHBP1Q8IV16 184 aa8.43□□□□□ -1.06
LINC01553-202ENST00000444900 ARIH1Q9Y4X5 557 aaPredicted RBP8.43□□□□□ -1.06
LINC01553-202ENST00000444900 GPBP1L1Q9HC44 474 aaPredicted RBP8.42□□□□□ -1.06
LINC01553-202ENST00000444900 ARSIQ5FYB1 569 aa8.41□□□□□ -1.06
LINC01553-202ENST00000444900 AK7Q96M32 723 aa8.4□□□□□ -1.06
LINC01553-202ENST00000444900 PPP1R15BQ5SWA1 713 aa8.4□□□□□ -1.07
LINC01553-202ENST00000444900 HOMEZQ8IX15 550 aa8.4□□□□□ -1.07
LINC01553-202ENST00000444900 IL27Q8NEV9 243 aa8.4□□□□□ -1.07
LINC01553-202ENST00000444900 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
LINC01553-202ENST00000444900 DPYSL4O14531 572 aa8.38□□□□□ -1.07
LINC01553-202ENST00000444900 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
LINC01553-202ENST00000444900 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
LINC01553-202ENST00000444900 LSM11P83369 360 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC01553-202ENST00000444900 DSG2Q14126 1118 aa8.34□□□□□ -1.07
LINC01553-202ENST00000444900 KHSRPQ92945 711 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC01553-202ENST00000444900 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.07
LINC01553-202ENST00000444900 PBX2P40425 430 aa8.33□□□□□ -1.08
LINC01553-202ENST00000444900 KDM4CQ9H3R0 1056 aa8.33□□□□□ -1.08
LINC01553-202ENST00000444900 TRIM66O15016 1216 aa8.32□□□□□ -1.08
LINC01553-202ENST00000444900 PDE4DQ08499 809 aa8.31□□□□□ -1.08
LINC01553-202ENST00000444900 KIF3CO14782 793 aa8.31□□□□□ -1.08
LINC01553-202ENST00000444900 SPDYE16A6NNV3 312 aaPredicted RBP8.29□□□□□ -1.08
LINC01553-202ENST00000444900 TMC2Q8TDI7 906 aa8.29□□□□□ -1.08
LINC01553-202ENST00000444900 GRXCR2A6NFK2 248 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms