RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 CDAN1Q8IWY9 1227 aa8.94□□□□□ -0.98
CBX1-204ENST00000444685 KCNH8Q96L42 1107 aa8.94□□□□□ -0.98
CBX1-204ENST00000444685 CARMIL1Q5VZK9 1371 aa8.94□□□□□ -0.98
CBX1-204ENST00000444685 UACAQ9BZF9 1416 aa8.94□□□□□ -0.98
CBX1-204ENST00000444685 ATXN8OSP0DMR3 200 aa8.93□□□□□ -0.98
CBX1-204ENST00000444685 UHRF1BP1LA0JNW5 1464 aa8.92□□□□□ -0.98
CBX1-204ENST00000444685 COL17A1Q9UMD9 1497 aaPredicted RBP8.91□□□□□ -0.98
CBX1-204ENST00000444685 SPDYE1Q8NFV5 336 aaPredicted RBP8.91□□□□□ -0.98
CBX1-204ENST00000444685 EPRSP07814 1512 aaKnown RBP8.9□□□□□ -0.98
CBX1-204ENST00000444685 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.98
CBX1-204ENST00000444685 CUL7Q14999 1698 aa8.9□□□□□ -0.98
CBX1-204ENST00000444685 CD109Q6YHK3 1445 aa8.88□□□□□ -0.99
CBX1-204ENST00000444685 MMRN1Q13201 1228 aa8.88□□□□□ -0.99
CBX1-204ENST00000444685 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
CBX1-204ENST00000444685 ARID4BQ4LE39 1312 aaPredicted RBP8.87□□□□□ -0.99
CBX1-204ENST00000444685 KDM5BQ9UGL1 1544 aa8.87□□□□□ -0.99
CBX1-204ENST00000444685 FKBP8Q14318 412 aa8.87□□□□□ -0.99
CBX1-204ENST00000444685 MAP3K4Q9Y6R4 1608 aa8.86□□□□□ -0.99
CBX1-204ENST00000444685 IQGAP2Q13576 1575 aa8.86□□□□□ -0.99
CBX1-204ENST00000444685 WDR7Q9Y4E6 1490 aa8.84□□□□□ -0.99
CBX1-204ENST00000444685 POTEJP0CG39 1038 aa8.83□□□□□ -1
CBX1-204ENST00000444685 MAGI3Q5TCQ9 1506 aa8.82□□□□□ -1
CBX1-204ENST00000444685 PHLDB1Q86UU1 1377 aa8.82□□□□□ -1
CBX1-204ENST00000444685 LMTK3Q96Q04 1460 aa8.82□□□□□ -1
CBX1-204ENST00000444685 DISP1Q96F81 1524 aa8.81□□□□□ -1
CBX1-204ENST00000444685 ZCCHC11Q5TAX3 1644 aaKnown RBP8.81□□□□□ -1
CBX1-204ENST00000444685 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
CBX1-204ENST00000444685 RAPGEF2Q9Y4G8 1499 aa8.8□□□□□ -1
CBX1-204ENST00000444685 RAPGEF3O95398 923 aa8.79□□□□□ -1
CBX1-204ENST00000444685 CERKQ8TCT0 537 aa8.79□□□□□ -1
CBX1-204ENST00000444685 UGGT2Q9NYU1 1516 aa8.79□□□□□ -1
CBX1-204ENST00000444685 PTPRMP28827 1452 aa8.78□□□□□ -1
CBX1-204ENST00000444685 GOLGA3Q08378 1498 aa8.78□□□□□ -1
CBX1-204ENST00000444685 ARID3CA6NKF2 412 aa8.78□□□□□ -1
CBX1-204ENST00000444685 AMER1Q5JTC6 1135 aaPredicted RBP8.78□□□□□ -1
CBX1-204ENST00000444685 CFAP43Q8NDM7 1665 aa8.78□□□□□ -1
CBX1-204ENST00000444685 ARAP3Q8WWN8 1544 aa8.77□□□□□ -1.01
CBX1-204ENST00000444685 DISP3Q9P2K9 1392 aa8.76□□□□□ -1.01
CBX1-204ENST00000444685 SOCS7O14512 581 aa8.76□□□□□ -1.01
CBX1-204ENST00000444685 GALR2O43603 387 aaPredicted RBP8.76□□□□□ -1.01
CBX1-204ENST00000444685 SPNS2Q8IVW8 549 aa8.76□□□□□ -1.01
CBX1-204ENST00000444685 KIF21BO75037 1637 aa8.76□□□□□ -1.01
CBX1-204ENST00000444685 HSPA2P54652 639 aa8.75□□□□□ -1.01
CBX1-204ENST00000444685 KIAA0556O60303 1618 aa8.74□□□□□ -1.01
CBX1-204ENST00000444685 SPDYE2BA6NHP3 402 aa8.74□□□□□ -1.01
CBX1-204ENST00000444685 SPDYE6P0CI01 402 aa8.74□□□□□ -1.01
CBX1-204ENST00000444685 SPDYE2Q495Y8 402 aa8.74□□□□□ -1.01
CBX1-204ENST00000444685 P3H3Q8IVL6 736 aa8.74□□□□□ -1.01
CBX1-204ENST00000444685 PELP1Q8IZL8 1130 aaKnown RBP8.74□□□□□ -1.01
CBX1-204ENST00000444685 MAMSTRQ6ZN01 415 aa8.73□□□□□ -1.01
CBX1-204ENST00000444685 POGZQ7Z3K3 1410 aa8.72□□□□□ -1.01
CBX1-204ENST00000444685 PLEKHD1A6NEE1 506 aa8.72□□□□□ -1.01
CBX1-204ENST00000444685 ZNF579Q8NAF0 562 aaKnown RBP8.72□□□□□ -1.01
CBX1-204ENST00000444685 PCF11O94913 1555 aaKnown RBP8.72□□□□□ -1.01
CBX1-204ENST00000444685 ADAMTSL3P82987 1691 aa8.71□□□□□ -1.02
CBX1-204ENST00000444685 SLC24A1O60721 1099 aa8.7□□□□□ -1.02
CBX1-204ENST00000444685 MLECQ14165 292 aa8.7□□□□□ -1.02
CBX1-204ENST00000444685 NEO1Q92859 1461 aa8.7□□□□□ -1.02
CBX1-204ENST00000444685 ILDR2Q71H61 639 aa8.69□□□□□ -1.02
CBX1-204ENST00000444685 FARP1Q9Y4F1 1045 aaPredicted RBP8.69□□□□□ -1.02
CBX1-204ENST00000444685 ATP10BO94823 1461 aa8.69□□□□□ -1.02
CBX1-204ENST00000444685 ABCA8O94911 1581 aa8.69□□□□□ -1.02
CBX1-204ENST00000444685 BCORL1Q5H9F3 1711 aa8.66□□□□□ -1.02
CBX1-204ENST00000444685 DENND4BO75064 1496 aaPredicted RBP8.66□□□□□ -1.02
CBX1-204ENST00000444685 AKNAQ7Z591 1439 aa8.66□□□□□ -1.02
CBX1-204ENST00000444685 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
CBX1-204ENST00000444685 MADDQ8WXG6 1647 aa8.65□□□□□ -1.02
CBX1-204ENST00000444685 FANCAO15360 1455 aa8.65□□□□□ -1.02
CBX1-204ENST00000444685 RANGAP1P46060 587 aaPredicted RBP8.65□□□□□ -1.02
CBX1-204ENST00000444685 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
CBX1-204ENST00000444685 MYT1LQ9UL68 1186 aa8.65□□□□□ -1.02
CBX1-204ENST00000444685 ZRANB1Q9UGI0 708 aa8.64□□□□□ -1.03
CBX1-204ENST00000444685 ABCA9Q8IUA7 1624 aa8.64□□□□□ -1.03
CBX1-204ENST00000444685 RIMS1Q86UR5 1692 aaKnown RBP8.63□□□□□ -1.03
CBX1-204ENST00000444685 CTTNBP2Q8WZ74 1663 aa8.63□□□□□ -1.03
CBX1-204ENST00000444685 YEATS2Q9ULM3 1422 aa8.63□□□□□ -1.03
CBX1-204ENST00000444685 METRNQ9UJH8 293 aa8.62□□□□□ -1.03
CBX1-204ENST00000444685 CEBPAP49715 358 aaPredicted RBP8.61□□□□□ -1.03
CBX1-204ENST00000444685 SCUBE2Q9NQ36 999 aa8.61□□□□□ -1.03
CBX1-204ENST00000444685 FHOD3Q2V2M9 1422 aa8.61□□□□□ -1.03
CBX1-204ENST00000444685 MAGI2Q86UL8 1455 aa8.6□□□□□ -1.03
CBX1-204ENST00000444685 EFCAB2Q5VUJ9 269 aa8.6□□□□□ -1.03
CBX1-204ENST00000444685 ATP1B4Q9UN42 357 aaPredicted RBP8.59□□□□□ -1.03
CBX1-204ENST00000444685 CDK11AQ9UQ88 783 aaPredicted RBP8.59□□□□□ -1.03
CBX1-204ENST00000444685 SETD1BQ9UPS6 1966 aaKnown RBP8.59□□□□□ -1.03
CBX1-204ENST00000444685 EFCAB5A4FU69 1503 aa8.58□□□□□ -1.04
CBX1-204ENST00000444685 PRXQ9BXM0 1461 aa8.57□□□□□ -1.04
CBX1-204ENST00000444685 UHRF1BP1Q6BDS2 1440 aa8.57□□□□□ -1.04
CBX1-204ENST00000444685 SCAPERQ9BY12 1400 aa8.57□□□□□ -1.04
CBX1-204ENST00000444685 ZFYVE16Q7Z3T8 1539 aa8.57□□□□□ -1.04
CBX1-204ENST00000444685 ARHGEF40Q8TER5 1519 aa8.57□□□□□ -1.04
CBX1-204ENST00000444685 RAPGEF6Q8TEU7 1601 aa8.57□□□□□ -1.04
CBX1-204ENST00000444685 ATP10AO60312 1499 aa8.57□□□□□ -1.04
CBX1-204ENST00000444685 CFAP74Q9C0B2 1584 aa8.56□□□□□ -1.04
CBX1-204ENST00000444685 FRMPD1Q5SYB0 1578 aa8.56□□□□□ -1.04
CBX1-204ENST00000444685 UBAP1LF5GYI3 381 aa8.55□□□□□ -1.04
CBX1-204ENST00000444685 C7P10643 843 aa8.55□□□□□ -1.04
CBX1-204ENST00000444685 RICTORQ6R327 1708 aa8.54□□□□□ -1.04
CBX1-204ENST00000444685 PTPRTO14522 1441 aa8.54□□□□□ -1.04
CBX1-204ENST00000444685 FER1L4A9Z1Z3 1794 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms