RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 AKNAQ7Z591 1439 aa21.9■■□□□ 1.1
SSBP3-208ENST00000444533 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
SSBP3-208ENST00000444533 CFDP1Q9UEE9 299 aaPredicted RBP21.9■■□□□ 1.1
SSBP3-208ENST00000444533 NCOA2Q15596 1464 aa21.88■■□□□ 1.09
SSBP3-208ENST00000444533 PREX2Q70Z35 1606 aa21.88■■□□□ 1.09
SSBP3-208ENST00000444533 ZNF777Q9ULD5 760 aaPredicted RBP21.87■■□□□ 1.09
SSBP3-208ENST00000444533 GPATCH8Q9UKJ3 1502 aaKnown RBP21.85■■□□□ 1.09
SSBP3-208ENST00000444533 ITSN2Q9NZM3 1697 aa21.85■■□□□ 1.09
SSBP3-208ENST00000444533 ADGRL1O94910 1474 aa21.85■■□□□ 1.09
SSBP3-208ENST00000444533 CDC42BPAQ5VT25 1732 aa21.84■■□□□ 1.09
SSBP3-208ENST00000444533 DENND4BO75064 1496 aaPredicted RBP21.83■■□□□ 1.09
SSBP3-208ENST00000444533 CDC42BPBQ9Y5S2 1711 aa21.83■■□□□ 1.08
SSBP3-208ENST00000444533 SCAPERQ9BY12 1400 aa21.81■■□□□ 1.08
SSBP3-208ENST00000444533 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
SSBP3-208ENST00000444533 COL17A1Q9UMD9 1497 aaPredicted RBP21.79■■□□□ 1.08
SSBP3-208ENST00000444533 RAPGEF3O95398 923 aa21.79■■□□□ 1.08
SSBP3-208ENST00000444533 MYT1LQ9UL68 1186 aa21.77■■□□□ 1.08
SSBP3-208ENST00000444533 MYOM3Q5VTT5 1437 aa21.75■■□□□ 1.07
SSBP3-208ENST00000444533 ZNF518AQ6AHZ1 1483 aa21.75■■□□□ 1.07
SSBP3-208ENST00000444533 POGZQ7Z3K3 1410 aa21.73■■□□□ 1.07
SSBP3-208ENST00000444533 ABCC1P33527 1531 aa21.73■■□□□ 1.07
SSBP3-208ENST00000444533 MIA2Q96PC5 1412 aa21.72■■□□□ 1.07
SSBP3-208ENST00000444533 KIAA1107Q9UPP5 1409 aa21.72■■□□□ 1.07
SSBP3-208ENST00000444533 SAMD9LQ8IVG5 1584 aa21.7■■□□□ 1.06
SSBP3-208ENST00000444533 HNRNPMP52272 730 aaKnown RBP eCLIP21.7■■□□□ 1.06
SSBP3-208ENST00000444533 RSPH4AQ5TD94 716 aa21.7■■□□□ 1.06
SSBP3-208ENST00000444533 PPARGC1BQ86YN6 1023 aaKnown RBP21.69■■□□□ 1.06
SSBP3-208ENST00000444533 SYCP2Q9BX26 1530 aa21.69■■□□□ 1.06
SSBP3-208ENST00000444533 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
SSBP3-208ENST00000444533 AFAP1Q8N556 730 aa21.68■■□□□ 1.06
SSBP3-208ENST00000444533 MAGI2Q86UL8 1455 aa21.68■■□□□ 1.06
SSBP3-208ENST00000444533 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
SSBP3-208ENST00000444533 ZNF644Q9H582 1327 aaPredicted RBP21.67■■□□□ 1.06
SSBP3-208ENST00000444533 FRMPD1Q5SYB0 1578 aa21.65■■□□□ 1.06
SSBP3-208ENST00000444533 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
SSBP3-208ENST00000444533 TRAPPC8Q9Y2L5 1435 aa21.64■■□□□ 1.06
SSBP3-208ENST00000444533 SPAG9O60271 1321 aaKnown RBP21.64■■□□□ 1.05
SSBP3-208ENST00000444533 FGD6Q6ZV73 1430 aa21.63■■□□□ 1.05
SSBP3-208ENST00000444533 TSPY4P0CV99 314 aa21.63■■□□□ 1.05
SSBP3-208ENST00000444533 TSPY10P0CW01 314 aa21.63■■□□□ 1.05
SSBP3-208ENST00000444533 ARHGEF12Q9NZN5 1544 aa21.63■■□□□ 1.05
SSBP3-208ENST00000444533 ZFYVE16Q7Z3T8 1539 aa21.62■■□□□ 1.05
SSBP3-208ENST00000444533 KDM5CP41229 1560 aa21.61■■□□□ 1.05
SSBP3-208ENST00000444533 PTPN23Q9H3S7 1636 aa21.6■■□□□ 1.05
SSBP3-208ENST00000444533 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
SSBP3-208ENST00000444533 HECW2Q9P2P5 1572 aa21.6■■□□□ 1.05
SSBP3-208ENST00000444533 CCDC141Q6ZP82 1450 aa21.59■■□□□ 1.05
SSBP3-208ENST00000444533 MLH3Q9UHC1 1453 aa21.58■■□□□ 1.05
SSBP3-208ENST00000444533 ARHGEF40Q8TER5 1519 aa21.58■■□□□ 1.04
SSBP3-208ENST00000444533 ARID4BQ4LE39 1312 aaPredicted RBP21.57■■□□□ 1.04
SSBP3-208ENST00000444533 MBD5Q9P267 1494 aa21.57■■□□□ 1.04
SSBP3-208ENST00000444533 ARHGEF5Q12774 1597 aa21.56■■□□□ 1.04
SSBP3-208ENST00000444533 ATP10AO60312 1499 aa21.54■■□□□ 1.04
SSBP3-208ENST00000444533 TCOF1Q13428 1488 aaKnown RBP21.54■■□□□ 1.04
SSBP3-208ENST00000444533 YEATS2Q9ULM3 1422 aa21.54■■□□□ 1.04
SSBP3-208ENST00000444533 ATP7AQ04656 1500 aa21.52■■□□□ 1.04
SSBP3-208ENST00000444533 RTEL1-TNFRSF6BF6WH68 1400 aa21.52■■□□□ 1.04
SSBP3-208ENST00000444533 C9orf84Q5VXU9 1444 aa21.52■■□□□ 1.04
SSBP3-208ENST00000444533 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
SSBP3-208ENST00000444533 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
SSBP3-208ENST00000444533 DAPK1P53355 1430 aa21.46■■□□□ 1.03
SSBP3-208ENST00000444533 DIP2CQ9Y2E4 1556 aa21.46■■□□□ 1.03
SSBP3-208ENST00000444533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.45■■□□□ 1.02
SSBP3-208ENST00000444533 SHANK2Q9UPX8 1470 aa21.45■■□□□ 1.02
SSBP3-208ENST00000444533 DNMT1P26358 1616 aaKnown RBP21.44■■□□□ 1.02
SSBP3-208ENST00000444533 ABCA6Q8N139 1617 aa21.44■■□□□ 1.02
SSBP3-208ENST00000444533 ABCC5O15440 1437 aa21.44■■□□□ 1.02
SSBP3-208ENST00000444533 A2MP01023 1474 aa21.42■■□□□ 1.02
SSBP3-208ENST00000444533 REREQ9P2R6 1566 aa21.42■■□□□ 1.02
SSBP3-208ENST00000444533 MAST1Q9Y2H9 1570 aa21.42■■□□□ 1.02
SSBP3-208ENST00000444533 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
SSBP3-208ENST00000444533 RRBP1Q9P2E9 1410 aaKnown RBP21.41■■□□□ 1.02
SSBP3-208ENST00000444533 ANKRD30AQ9BXX3 1397 aa21.41■■□□□ 1.02
SSBP3-208ENST00000444533 ITGAEP38570 1179 aa21.4■■□□□ 1.02
SSBP3-208ENST00000444533 MLECQ14165 292 aa21.4■■□□□ 1.02
SSBP3-208ENST00000444533 ESF1Q9H501 851 aaKnown RBP21.4■■□□□ 1.02
SSBP3-208ENST00000444533 CHIC2Q9UKJ5 165 aa21.4■■□□□ 1.02
SSBP3-208ENST00000444533 CROCC2H7BZ55 1655 aa21.4■■□□□ 1.02
SSBP3-208ENST00000444533 DHX29Q7Z478 1369 aaKnown RBP21.37■■□□□ 1.01
SSBP3-208ENST00000444533 AGLP35573 1532 aa21.36■■□□□ 1.01
SSBP3-208ENST00000444533 RRP7BPQ9NSQ0 103 aa21.36■■□□□ 1.01
SSBP3-208ENST00000444533 PLXNC1O60486 1568 aa21.36■■□□□ 1.01
SSBP3-208ENST00000444533 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
SSBP3-208ENST00000444533 BCORL1Q5H9F3 1711 aa21.33■■□□□ 1.01
SSBP3-208ENST00000444533 KDM4FA0A1W2PPD8 638 aa21.32■■□□□ 1
SSBP3-208ENST00000444533 KIF3BO15066 747 aa21.32■■□□□ 1
SSBP3-208ENST00000444533 DUOX2Q9NRD8 1548 aa21.32■■□□□ 1
SSBP3-208ENST00000444533 GGT6Q6P531 493 aa21.31■■□□□ 1
SSBP3-208ENST00000444533 NCOA1Q15788 1441 aa21.29■■□□□ 1
SSBP3-208ENST00000444533 ADGRL2O95490 1459 aa21.29■■□□□ 1
SSBP3-208ENST00000444533 ROCK1Q13464 1354 aa21.29■■□□□ 1
SSBP3-208ENST00000444533 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
SSBP3-208ENST00000444533 ERBINQ96RT1 1412 aa21.28■■□□□ 1
SSBP3-208ENST00000444533 SIGLEC1Q9BZZ2 1709 aa21.26■□□□□ 0.99
SSBP3-208ENST00000444533 ADAMTSL3P82987 1691 aa21.25■□□□□ 0.99
SSBP3-208ENST00000444533 EIF2AK4Q9P2K8 1649 aaKnown RBP21.24■□□□□ 0.99
SSBP3-208ENST00000444533 PTPRKQ15262 1439 aa21.23■□□□□ 0.99
SSBP3-208ENST00000444533 CNTLNQ9NXG0 1405 aa21.23■□□□□ 0.99
SSBP3-208ENST00000444533 FER1L4A9Z1Z3 1794 aa21.23■□□□□ 0.99
SSBP3-208ENST00000444533 MADDQ8WXG6 1647 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms