RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SCAPERQ9BY12 1400 aa29.66■■■□□ 2.34
CCDC188-202ENST00000444532 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.34
CCDC188-202ENST00000444532 PREX2Q70Z35 1606 aa29.64■■■□□ 2.34
CCDC188-202ENST00000444532 VPS8Q8N3P4 1428 aa29.64■■■□□ 2.34
CCDC188-202ENST00000444532 CDC42BPAQ5VT25 1732 aa29.61■■■□□ 2.33
CCDC188-202ENST00000444532 POGZQ7Z3K3 1410 aa29.6■■■□□ 2.33
CCDC188-202ENST00000444532 ZMYM4Q5VZL5 1548 aa29.6■■■□□ 2.33
CCDC188-202ENST00000444532 EHBP1L1Q8N3D4 1523 aa29.56■■■□□ 2.32
CCDC188-202ENST00000444532 MAGI2Q86UL8 1455 aa29.56■■■□□ 2.32
CCDC188-202ENST00000444532 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
CCDC188-202ENST00000444532 GPATCH8Q9UKJ3 1502 aaKnown RBP29.55■■■□□ 2.32
CCDC188-202ENST00000444532 ZNF518AQ6AHZ1 1483 aa29.52■■■□□ 2.32
CCDC188-202ENST00000444532 TIAM1Q13009 1591 aa29.52■■■□□ 2.32
CCDC188-202ENST00000444532 CCNB3Q8WWL7 1395 aa29.52■■■□□ 2.32
CCDC188-202ENST00000444532 ZFYVE16Q7Z3T8 1539 aa29.5■■■□□ 2.31
CCDC188-202ENST00000444532 ABCC1P33527 1531 aa29.49■■■□□ 2.31
CCDC188-202ENST00000444532 AFAP1Q8N556 730 aa29.46■■■□□ 2.31
CCDC188-202ENST00000444532 CFDP1Q9UEE9 299 aaPredicted RBP29.46■■■□□ 2.31
CCDC188-202ENST00000444532 KDM5CP41229 1560 aa29.46■■■□□ 2.31
CCDC188-202ENST00000444532 YEATS2Q9ULM3 1422 aa29.45■■■□□ 2.31
CCDC188-202ENST00000444532 MAP3K1Q13233 1512 aa29.45■■■□□ 2.31
CCDC188-202ENST00000444532 ITSN2Q9NZM3 1697 aa29.44■■■□□ 2.3
CCDC188-202ENST00000444532 ZNF777Q9ULD5 760 aaPredicted RBP29.44■■■□□ 2.3
CCDC188-202ENST00000444532 ARHGEF12Q9NZN5 1544 aa29.44■■■□□ 2.3
CCDC188-202ENST00000444532 SUPT6HQ7KZ85 1726 aaKnown RBP29.43■■■□□ 2.3
CCDC188-202ENST00000444532 SAMD9LQ8IVG5 1584 aa29.43■■■□□ 2.3
CCDC188-202ENST00000444532 ARID4BQ4LE39 1312 aaPredicted RBP29.42■■■□□ 2.3
CCDC188-202ENST00000444532 TRAPPC8Q9Y2L5 1435 aa29.4■■■□□ 2.3
CCDC188-202ENST00000444532 LRRC9Q6ZRR7 1453 aa29.4■■■□□ 2.3
CCDC188-202ENST00000444532 PLEKHH2Q8IVE3 1493 aa29.39■■■□□ 2.3
CCDC188-202ENST00000444532 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.29
CCDC188-202ENST00000444532 ATP10AO60312 1499 aa29.38■■■□□ 2.29
CCDC188-202ENST00000444532 NCOA2Q15596 1464 aa29.38■■■□□ 2.29
CCDC188-202ENST00000444532 BCORL1Q5H9F3 1711 aa29.38■■■□□ 2.29
CCDC188-202ENST00000444532 KIAA1107Q9UPP5 1409 aa29.37■■■□□ 2.29
CCDC188-202ENST00000444532 MLH3Q9UHC1 1453 aa29.37■■■□□ 2.29
CCDC188-202ENST00000444532 ADAMTSL3P82987 1691 aa29.37■■■□□ 2.29
CCDC188-202ENST00000444532 MYT1LQ9UL68 1186 aa29.35■■■□□ 2.29
CCDC188-202ENST00000444532 SYCP2Q9BX26 1530 aa29.35■■■□□ 2.29
CCDC188-202ENST00000444532 HNRNPMP52272 730 aaKnown RBP eCLIP29.33■■■□□ 2.29
CCDC188-202ENST00000444532 APLP2Q06481 763 aa29.33■■■□□ 2.29
CCDC188-202ENST00000444532 C9orf84Q5VXU9 1444 aa29.33■■■□□ 2.29
CCDC188-202ENST00000444532 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
CCDC188-202ENST00000444532 SIGLEC1Q9BZZ2 1709 aa29.31■■■□□ 2.28
CCDC188-202ENST00000444532 DIP2CQ9Y2E4 1556 aa29.28■■■□□ 2.28
CCDC188-202ENST00000444532 ZNF644Q9H582 1327 aaPredicted RBP29.27■■■□□ 2.28
CCDC188-202ENST00000444532 KIDINS220Q9ULH0 1771 aa29.27■■■□□ 2.28
CCDC188-202ENST00000444532 ABCA6Q8N139 1617 aa29.26■■■□□ 2.27
CCDC188-202ENST00000444532 REREQ9P2R6 1566 aa29.25■■■□□ 2.27
CCDC188-202ENST00000444532 SPAG9O60271 1321 aaKnown RBP29.24■■■□□ 2.27
CCDC188-202ENST00000444532 MADDQ8WXG6 1647 aa29.23■■■□□ 2.27
CCDC188-202ENST00000444532 PTPRMP28827 1452 aa29.22■■■□□ 2.27
CCDC188-202ENST00000444532 MBD5Q9P267 1494 aa29.22■■■□□ 2.27
CCDC188-202ENST00000444532 CAMSAP2Q08AD1 1489 aa29.18■■■□□ 2.26
CCDC188-202ENST00000444532 MLECQ14165 292 aa29.18■■■□□ 2.26
CCDC188-202ENST00000444532 ATP7AQ04656 1500 aa29.18■■■□□ 2.26
CCDC188-202ENST00000444532 RSPH4AQ5TD94 716 aa29.17■■■□□ 2.26
CCDC188-202ENST00000444532 INO80Q9ULG1 1556 aaPredicted RBP29.17■■■□□ 2.26
CCDC188-202ENST00000444532 RIMS1Q86UR5 1692 aaKnown RBP29.16■■■□□ 2.26
CCDC188-202ENST00000444532 AGLP35573 1532 aa29.15■■■□□ 2.26
CCDC188-202ENST00000444532 MYOM3Q5VTT5 1437 aa29.14■■■□□ 2.26
CCDC188-202ENST00000444532 MIA2Q96PC5 1412 aa29.13■■■□□ 2.25
CCDC188-202ENST00000444532 FER1L4A9Z1Z3 1794 aa29.13■■■□□ 2.25
CCDC188-202ENST00000444532 RTEL1-TNFRSF6BF6WH68 1400 aa29.11■■■□□ 2.25
CCDC188-202ENST00000444532 CCDC141Q6ZP82 1450 aa29.1■■■□□ 2.25
CCDC188-202ENST00000444532 ARHGEF5Q12774 1597 aa29.09■■■□□ 2.25
CCDC188-202ENST00000444532 ADGBQ8N7X0 1667 aa29.05■■■□□ 2.24
CCDC188-202ENST00000444532 A2MP01023 1474 aa29.05■■■□□ 2.24
CCDC188-202ENST00000444532 PLXNC1O60486 1568 aa29.02■■■□□ 2.24
CCDC188-202ENST00000444532 TSPY4P0CV99 314 aa29.02■■■□□ 2.24
CCDC188-202ENST00000444532 TSPY10P0CW01 314 aa29.02■■■□□ 2.24
CCDC188-202ENST00000444532 ESF1Q9H501 851 aaKnown RBP28.98■■■□□ 2.23
CCDC188-202ENST00000444532 PTPN23Q9H3S7 1636 aa28.96■■■□□ 2.23
CCDC188-202ENST00000444532 DHX29Q7Z478 1369 aaKnown RBP28.95■■■□□ 2.22
CCDC188-202ENST00000444532 FGD6Q6ZV73 1430 aa28.94■■■□□ 2.22
CCDC188-202ENST00000444532 PLPPR3Q6T4P5 718 aa28.94■■■□□ 2.22
CCDC188-202ENST00000444532 MAST1Q9Y2H9 1570 aa28.93■■■□□ 2.22
CCDC188-202ENST00000444532 CNTLNQ9NXG0 1405 aa28.92■■■□□ 2.22
CCDC188-202ENST00000444532 TCOF1Q13428 1488 aaKnown RBP28.9■■■□□ 2.22
CCDC188-202ENST00000444532 CEBPAP49715 358 aaPredicted RBP28.89■■■□□ 2.22
CCDC188-202ENST00000444532 PPP6R1Q9UPN7 881 aa28.88■■■□□ 2.21
CCDC188-202ENST00000444532 GGT6Q6P531 493 aa28.86■■■□□ 2.21
CCDC188-202ENST00000444532 C3P01024 1663 aa28.86■■■□□ 2.21
CCDC188-202ENST00000444532 MROH2AA6NES4 1674 aa28.85■■■□□ 2.21
CCDC188-202ENST00000444532 LMTK3Q96Q04 1460 aa28.85■■■□□ 2.21
CCDC188-202ENST00000444532 ABCC5O15440 1437 aa28.83■■■□□ 2.21
CCDC188-202ENST00000444532 CROCC2H7BZ55 1655 aa28.83■■■□□ 2.21
CCDC188-202ENST00000444532 KIF3BO15066 747 aa28.82■■■□□ 2.2
CCDC188-202ENST00000444532 SHANK2Q9UPX8 1470 aa28.82■■■□□ 2.2
CCDC188-202ENST00000444532 DNMT1P26358 1616 aaKnown RBP28.82■■■□□ 2.2
CCDC188-202ENST00000444532 SETD1BQ9UPS6 1966 aaKnown RBP28.82■■■□□ 2.2
CCDC188-202ENST00000444532 DAPK1P53355 1430 aa28.8■■■□□ 2.2
CCDC188-202ENST00000444532 CLTCQ00610 1675 aaKnown RBP28.8■■■□□ 2.2
CCDC188-202ENST00000444532 ZMYM3Q14202 1370 aa28.79■■■□□ 2.2
CCDC188-202ENST00000444532 PREX1Q8TCU6 1659 aa28.79■■■□□ 2.2
CCDC188-202ENST00000444532 DUOX2Q9NRD8 1548 aa28.74■■■□□ 2.19
CCDC188-202ENST00000444532 FAM50AQ14320 339 aaKnown RBP28.73■■■□□ 2.19
CCDC188-202ENST00000444532 FAM135AQ9P2D6 1515 aa28.73■■■□□ 2.19
CCDC188-202ENST00000444532 EIF2AK4Q9P2K8 1649 aaKnown RBP28.72■■■□□ 2.19
CCDC188-202ENST00000444532 NPATQ14207 1427 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms