RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 ZFYVE16Q7Z3T8 1539 aa38.4■■■■□ 3.74
TMEM238-201ENST00000444469 BCORL1Q5H9F3 1711 aa38.38■■■■□ 3.74
TMEM238-201ENST00000444469 MAGI2Q86UL8 1455 aa38.38■■■■□ 3.73
TMEM238-201ENST00000444469 POGZQ7Z3K3 1410 aa38.37■■■■□ 3.73
TMEM238-201ENST00000444469 ARHGAP5Q13017 1502 aa38.36■■■■□ 3.73
TMEM238-201ENST00000444469 PTPRMP28827 1452 aa38.35■■■■□ 3.73
TMEM238-201ENST00000444469 LRRIQ1Q96JM4 1722 aa38.35■■■■□ 3.73
TMEM238-201ENST00000444469 FYCO1Q9BQS8 1478 aa38.3■■■■□ 3.72
TMEM238-201ENST00000444469 YEATS2Q9ULM3 1422 aa38.29■■■■□ 3.72
TMEM238-201ENST00000444469 MADDQ8WXG6 1647 aa38.29■■■■□ 3.72
TMEM238-201ENST00000444469 MYT1LQ9UL68 1186 aa38.24■■■■□ 3.71
TMEM238-201ENST00000444469 ZNF518AQ6AHZ1 1483 aa38.22■■■■□ 3.71
TMEM238-201ENST00000444469 RIMS1Q86UR5 1692 aaKnown RBP38.18■■■■□ 3.7
TMEM238-201ENST00000444469 MLECQ14165 292 aa38.17■■■■□ 3.7
TMEM238-201ENST00000444469 ATP10AO60312 1499 aa38.16■■■■□ 3.7
TMEM238-201ENST00000444469 C9orf84Q5VXU9 1444 aa38.14■■■■□ 3.7
TMEM238-201ENST00000444469 PREX2Q70Z35 1606 aa38.14■■■■□ 3.7
TMEM238-201ENST00000444469 AFAP1Q8N556 730 aa38.12■■■■□ 3.69
TMEM238-201ENST00000444469 CDC42BPBQ9Y5S2 1711 aa38.12■■■■□ 3.69
TMEM238-201ENST00000444469 PLPPR3Q6T4P5 718 aa38.11■■■■□ 3.69
TMEM238-201ENST00000444469 KDM5CP41229 1560 aa38.07■■■■□ 3.69
TMEM238-201ENST00000444469 SIGLEC1Q9BZZ2 1709 aa38.06■■■■□ 3.68
TMEM238-201ENST00000444469 ABCC1P33527 1531 aa38.03■■■■□ 3.68
TMEM238-201ENST00000444469 FER1L4A9Z1Z3 1794 aa38.01■■■■□ 3.68
TMEM238-201ENST00000444469 ZNF777Q9ULD5 760 aaPredicted RBP38.01■■■■□ 3.68
TMEM238-201ENST00000444469 CDC42BPAQ5VT25 1732 aa38■■■■□ 3.67
TMEM238-201ENST00000444469 MTUS2Q5JR59 1369 aa37.99■■■■□ 3.67
TMEM238-201ENST00000444469 MLH3Q9UHC1 1453 aa37.96■■■■□ 3.67
TMEM238-201ENST00000444469 ITSN2Q9NZM3 1697 aa37.96■■■■□ 3.67
TMEM238-201ENST00000444469 TRAPPC8Q9Y2L5 1435 aa37.95■■■■□ 3.67
TMEM238-201ENST00000444469 CEP162Q5TB80 1403 aa37.95■■■■□ 3.67
TMEM238-201ENST00000444469 DIP2CQ9Y2E4 1556 aa37.93■■■■□ 3.66
TMEM238-201ENST00000444469 ARHGEF12Q9NZN5 1544 aa37.93■■■■□ 3.66
TMEM238-201ENST00000444469 LMTK3Q96Q04 1460 aa37.92■■■■□ 3.66
TMEM238-201ENST00000444469 CCNB3Q8WWL7 1395 aa37.92■■■■□ 3.66
TMEM238-201ENST00000444469 ILDR1Q86SU0 546 aaPredicted RBP37.9■■■■□ 3.66
TMEM238-201ENST00000444469 GPATCH8Q9UKJ3 1502 aaKnown RBP37.9■■■■□ 3.66
TMEM238-201ENST00000444469 CFDP1Q9UEE9 299 aaPredicted RBP37.89■■■■□ 3.66
TMEM238-201ENST00000444469 ABCA6Q8N139 1617 aa37.87■■■■□ 3.65
TMEM238-201ENST00000444469 REREQ9P2R6 1566 aa37.87■■■■□ 3.65
TMEM238-201ENST00000444469 ESF1Q9H501 851 aaKnown RBP37.85■■■■□ 3.65
TMEM238-201ENST00000444469 SAMD9LQ8IVG5 1584 aa37.85■■■■□ 3.65
TMEM238-201ENST00000444469 PLEKHH2Q8IVE3 1493 aa37.84■■■■□ 3.65
TMEM238-201ENST00000444469 SYCP2Q9BX26 1530 aa37.83■■■■□ 3.65
TMEM238-201ENST00000444469 EHBP1L1Q8N3D4 1523 aa37.81■■■■□ 3.64
TMEM238-201ENST00000444469 SPAG9O60271 1321 aaKnown RBP37.8■■■■□ 3.64
TMEM238-201ENST00000444469 HNRNPMP52272 730 aaKnown RBP eCLIP37.79■■■■□ 3.64
TMEM238-201ENST00000444469 HSPA2P54652 639 aa37.77■■■■□ 3.64
TMEM238-201ENST00000444469 KIDINS220Q9ULH0 1771 aa37.77■■■■□ 3.64
TMEM238-201ENST00000444469 AGLP35573 1532 aa37.77■■■■□ 3.64
TMEM238-201ENST00000444469 KIAA1107Q9UPP5 1409 aa37.75■■■■□ 3.63
TMEM238-201ENST00000444469 CEBPAP49715 358 aaPredicted RBP37.74■■■■□ 3.63
TMEM238-201ENST00000444469 TIAM1Q13009 1591 aa37.68■■■■□ 3.62
TMEM238-201ENST00000444469 PREX1Q8TCU6 1659 aa37.67■■■■□ 3.62
TMEM238-201ENST00000444469 ATP7AQ04656 1500 aa37.66■■■■□ 3.62
TMEM238-201ENST00000444469 LOC105371045A0A1W2PR82 267 aa37.63■■■■□ 3.61
TMEM238-201ENST00000444469 UHRF1BP1Q6BDS2 1440 aa37.61■■■■□ 3.61
TMEM238-201ENST00000444469 CNTLNQ9NXG0 1405 aa37.61■■■■□ 3.61
TMEM238-201ENST00000444469 INO80Q9ULG1 1556 aaPredicted RBP37.59■■■■□ 3.61
TMEM238-201ENST00000444469 SUPT6HQ7KZ85 1726 aaKnown RBP37.58■■■■□ 3.61
TMEM238-201ENST00000444469 ZNF644Q9H582 1327 aaPredicted RBP37.57■■■■□ 3.6
TMEM238-201ENST00000444469 A2MP01023 1474 aa37.56■■■■□ 3.6
TMEM238-201ENST00000444469 VPS8Q8N3P4 1428 aa37.55■■■■□ 3.6
TMEM238-201ENST00000444469 C3P01024 1663 aa37.55■■■■□ 3.6
TMEM238-201ENST00000444469 NCOA2Q15596 1464 aa37.53■■■■□ 3.6
TMEM238-201ENST00000444469 FBXO41Q8TF61 875 aa37.52■■■■□ 3.6
TMEM238-201ENST00000444469 SETD1BQ9UPS6 1966 aaKnown RBP37.48■■■■□ 3.59
TMEM238-201ENST00000444469 MBD5Q9P267 1494 aa37.46■■■■□ 3.59
TMEM238-201ENST00000444469 ADGBQ8N7X0 1667 aa37.46■■■■□ 3.59
TMEM238-201ENST00000444469 PLXNC1O60486 1568 aa37.46■■■■□ 3.59
TMEM238-201ENST00000444469 GGT6Q6P531 493 aa37.44■■■■□ 3.58
TMEM238-201ENST00000444469 DMRT2Q9Y5R5 561 aa37.44■■■■□ 3.58
TMEM238-201ENST00000444469 CAMSAP2Q08AD1 1489 aa37.43■■■■□ 3.58
TMEM238-201ENST00000444469 MROH2AA6NES4 1674 aa37.43■■■■□ 3.58
TMEM238-201ENST00000444469 RTEL1-TNFRSF6BF6WH68 1400 aa37.43■■■■□ 3.58
TMEM238-201ENST00000444469 RSPH4AQ5TD94 716 aa37.42■■■■□ 3.58
TMEM238-201ENST00000444469 CCDC141Q6ZP82 1450 aa37.41■■■■□ 3.58
TMEM238-201ENST00000444469 LRRC9Q6ZRR7 1453 aa37.4■■■■□ 3.58
TMEM238-201ENST00000444469 ZMYM3Q14202 1370 aa37.4■■■■□ 3.58
TMEM238-201ENST00000444469 NPATQ14207 1427 aa37.36■■■■□ 3.57
TMEM238-201ENST00000444469 CLTCQ00610 1675 aaKnown RBP37.35■■■■□ 3.57
TMEM238-201ENST00000444469 PPP6R1Q9UPN7 881 aa37.34■■■■□ 3.57
TMEM238-201ENST00000444469 TSPY4P0CV99 314 aa37.32■■■■□ 3.56
TMEM238-201ENST00000444469 TSPY10P0CW01 314 aa37.32■■■■□ 3.56
TMEM238-201ENST00000444469 DHX29Q7Z478 1369 aaKnown RBP37.31■■■■□ 3.56
TMEM238-201ENST00000444469 MAP3K1Q13233 1512 aa37.31■■■■□ 3.56
TMEM238-201ENST00000444469 APLP2Q06481 763 aa37.3■■■■□ 3.56
TMEM238-201ENST00000444469 CERKQ8TCT0 537 aa37.26■■■■□ 3.56
TMEM238-201ENST00000444469 STRCQ7RTU9 1775 aa37.26■■■■□ 3.56
TMEM238-201ENST00000444469 ARHGEF5Q12774 1597 aa37.25■■■■□ 3.55
TMEM238-201ENST00000444469 KIF3BO15066 747 aa37.24■■■■□ 3.55
TMEM238-201ENST00000444469 KANK4Q5T7N3 995 aaPredicted RBP37.22■■■■□ 3.55
TMEM238-201ENST00000444469 PTPRTO14522 1441 aa37.18■■■■□ 3.54
TMEM238-201ENST00000444469 PTPRKQ15262 1439 aa37.17■■■■□ 3.54
TMEM238-201ENST00000444469 MYOM3Q5VTT5 1437 aa37.17■■■■□ 3.54
TMEM238-201ENST00000444469 MIA2Q96PC5 1412 aa37.16■■■■□ 3.54
TMEM238-201ENST00000444469 NCOA1Q15788 1441 aa37.15■■■■□ 3.54
TMEM238-201ENST00000444469 CAMSAP1Q5T5Y3 1602 aa37.14■■■■□ 3.54
TMEM238-201ENST00000444469 MYO3AQ8NEV4 1616 aa37.14■■■■□ 3.54
TMEM238-201ENST00000444469 WASHC2CQ9Y4E1 1318 aa37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms