RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MYOM3Q5VTT5 1437 aa19.14■□□□□ 0.65
SMARCA4-204ENST00000444061 ZBTB7CA1YPR0 619 aa19.13■□□□□ 0.65
SMARCA4-204ENST00000444061 ZNF644Q9H582 1327 aaPredicted RBP19.13■□□□□ 0.65
SMARCA4-204ENST00000444061 EID1Q9Y6B2 187 aa19.12■□□□□ 0.65
SMARCA4-204ENST00000444061 FYCO1Q9BQS8 1478 aa19.12■□□□□ 0.65
SMARCA4-204ENST00000444061 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
SMARCA4-204ENST00000444061 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
SMARCA4-204ENST00000444061 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.65
SMARCA4-204ENST00000444061 AFAP1Q8N556 730 aa19.08■□□□□ 0.65
SMARCA4-204ENST00000444061 LRRC9Q6ZRR7 1453 aa19.08■□□□□ 0.64
SMARCA4-204ENST00000444061 ARHGAP5Q13017 1502 aa19.07■□□□□ 0.64
SMARCA4-204ENST00000444061 STK26Q9P289 416 aa19.07■□□□□ 0.64
SMARCA4-204ENST00000444061 FGD6Q6ZV73 1430 aa19.06■□□□□ 0.64
SMARCA4-204ENST00000444061 NCOA2Q15596 1464 aa19.06■□□□□ 0.64
SMARCA4-204ENST00000444061 TROQ12816 1431 aaPredicted RBP19.06■□□□□ 0.64
SMARCA4-204ENST00000444061 CANXP27824 592 aaKnown RBP19.05■□□□□ 0.64
SMARCA4-204ENST00000444061 SAFB2Q14151 953 aaKnown RBP eCLIP19.04■□□□□ 0.642e-6■□□□□ 10.3
SMARCA4-204ENST00000444061 WDR43Q15061 677 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMARCA4-204ENST00000444061 KNSTRNQ9Y448 316 aa19.03■□□□□ 0.64
SMARCA4-204ENST00000444061 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
SMARCA4-204ENST00000444061 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.63
SMARCA4-204ENST00000444061 PHLDB1Q86UU1 1377 aa19.01■□□□□ 0.63
SMARCA4-204ENST00000444061 KIF15Q9NS87 1388 aa19.01■□□□□ 0.63
SMARCA4-204ENST00000444061 SRPK2P78362 688 aaKnown RBP19■□□□□ 0.63
SMARCA4-204ENST00000444061 HECW1Q76N89 1606 aa18.99■□□□□ 0.63
SMARCA4-204ENST00000444061 TMF1P82094 1093 aa18.99■□□□□ 0.63
SMARCA4-204ENST00000444061 WDR62O43379 1518 aa18.99■□□□□ 0.63
SMARCA4-204ENST00000444061 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
SMARCA4-204ENST00000444061 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
SMARCA4-204ENST00000444061 A0A0G2JS52 829 aa18.98■□□□□ 0.63
SMARCA4-204ENST00000444061 PLB1Q6P1J6 1458 aa18.97■□□□□ 0.63
SMARCA4-204ENST00000444061 MRS2Q9HD23 443 aa18.97■□□□□ 0.63
SMARCA4-204ENST00000444061 ZBTB47Q9UFB7 747 aaPredicted RBP18.96■□□□□ 0.63
SMARCA4-204ENST00000444061 RAPGEF3O95398 923 aa18.95■□□□□ 0.62
SMARCA4-204ENST00000444061 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
SMARCA4-204ENST00000444061 PLEKHH2Q8IVE3 1493 aa18.94■□□□□ 0.62
SMARCA4-204ENST00000444061 CFAP53Q96M91 514 aa18.94■□□□□ 0.62
SMARCA4-204ENST00000444061 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
SMARCA4-204ENST00000444061 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
SMARCA4-204ENST00000444061 EPRSP07814 1512 aaKnown RBP18.93■□□□□ 0.62
SMARCA4-204ENST00000444061 EHBP1L1Q8N3D4 1523 aa18.93■□□□□ 0.62
SMARCA4-204ENST00000444061 SCAPERQ9BY12 1400 aa18.91■□□□□ 0.62
SMARCA4-204ENST00000444061 HNRNPUQ00839 825 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMARCA4-204ENST00000444061 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
SMARCA4-204ENST00000444061 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
SMARCA4-204ENST00000444061 ANKRD50Q9ULJ7 1429 aa18.9■□□□□ 0.62
SMARCA4-204ENST00000444061 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
SMARCA4-204ENST00000444061 L3MBTL2Q969R5 705 aa18.9■□□□□ 0.62
SMARCA4-204ENST00000444061 VGFO15240 615 aaPredicted RBP18.89■□□□□ 0.62
SMARCA4-204ENST00000444061 MIA2Q96PC5 1412 aa18.86■□□□□ 0.61
SMARCA4-204ENST00000444061 EIF4G3O43432 1585 aaKnown RBP18.85■□□□□ 0.61
SMARCA4-204ENST00000444061 HDGFL2Q7Z4V5 671 aaPredicted RBP18.82■□□□□ 0.6
SMARCA4-204ENST00000444061 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
SMARCA4-204ENST00000444061 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
SMARCA4-204ENST00000444061 NPM2Q86SE8 214 aaKnown RBP18.82■□□□□ 0.6
SMARCA4-204ENST00000444061 GTF3C3Q9Y5Q9 886 aa18.82■□□□□ 0.6
SMARCA4-204ENST00000444061 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
SMARCA4-204ENST00000444061 DAXXQ9UER7 740 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-204ENST00000444061 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
SMARCA4-204ENST00000444061 BCL11AQ9H165 835 aa18.81■□□□□ 0.6
SMARCA4-204ENST00000444061 TIAM1Q13009 1591 aa18.8■□□□□ 0.6
SMARCA4-204ENST00000444061 ADAMTS12P58397 1594 aa18.8■□□□□ 0.6
SMARCA4-204ENST00000444061 SOX12O15370 315 aa18.8■□□□□ 0.6
SMARCA4-204ENST00000444061 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
SMARCA4-204ENST00000444061 NUDCQ9Y266 331 aa18.8■□□□□ 0.6
SMARCA4-204ENST00000444061 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.79■□□□□ 0.6
SMARCA4-204ENST00000444061 TRAK1Q9UPV9 953 aa18.78■□□□□ 0.6
SMARCA4-204ENST00000444061 POGZQ7Z3K3 1410 aa18.78■□□□□ 0.6
SMARCA4-204ENST00000444061 PAK3O75914 559 aaPredicted RBP18.78■□□□□ 0.6
SMARCA4-204ENST00000444061 CC2D1BQ5T0F9 858 aaKnown RBP18.77■□□□□ 0.6
SMARCA4-204ENST00000444061 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
SMARCA4-204ENST00000444061 DHX57Q6P158 1386 aaKnown RBP18.73■□□□□ 0.59
SMARCA4-204ENST00000444061 SUPT6HQ7KZ85 1726 aaKnown RBP18.73■□□□□ 0.59
SMARCA4-204ENST00000444061 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
SMARCA4-204ENST00000444061 MORC1Q86VD1 984 aa18.72■□□□□ 0.59
SMARCA4-204ENST00000444061 NUTM2FA1L443 756 aa18.72■□□□□ 0.59
SMARCA4-204ENST00000444061 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
SMARCA4-204ENST00000444061 NUP160Q12769 1436 aa18.71■□□□□ 0.59
SMARCA4-204ENST00000444061 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
SMARCA4-204ENST00000444061 RRBP1Q9P2E9 1410 aaKnown RBP18.7■□□□□ 0.58
SMARCA4-204ENST00000444061 MIER1Q8N108 512 aa18.7■□□□□ 0.58
SMARCA4-204ENST00000444061 KIF14Q15058 1648 aa18.7■□□□□ 0.58
SMARCA4-204ENST00000444061 TERF2IPQ9NYB0 399 aa18.69■□□□□ 0.58
SMARCA4-204ENST00000444061 ASXL2Q76L83 1435 aa18.69■□□□□ 0.58
SMARCA4-204ENST00000444061 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-204ENST00000444061 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
SMARCA4-204ENST00000444061 DAPK1P53355 1430 aa18.67■□□□□ 0.58
SMARCA4-204ENST00000444061 CCDC141Q6ZP82 1450 aa18.66■□□□□ 0.58
SMARCA4-204ENST00000444061 THEMISQ8N1K5 641 aaPredicted RBP18.66■□□□□ 0.58
SMARCA4-204ENST00000444061 UGGT2Q9NYU1 1516 aa18.66■□□□□ 0.58
SMARCA4-204ENST00000444061 TXNDC2Q86VQ3 553 aa18.65■□□□□ 0.58
SMARCA4-204ENST00000444061 DENND4BO75064 1496 aaPredicted RBP18.65■□□□□ 0.58
SMARCA4-204ENST00000444061 ATP10BO94823 1461 aa18.65■□□□□ 0.58
SMARCA4-204ENST00000444061 FANCAO15360 1455 aa18.64■□□□□ 0.58
SMARCA4-204ENST00000444061 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.64■□□□□ 0.57
SMARCA4-204ENST00000444061 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
SMARCA4-204ENST00000444061 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
SMARCA4-204ENST00000444061 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
SMARCA4-204ENST00000444061 RTL5Q5HYW3 569 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-204ENST00000444061 PNNQ9H307 717 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms