RNA–Protein interactions for RNA: ENST00000443943.5

AP1S1-203, Transcript of adaptor related protein complex 1 subunit sigma 1, humanhuman

TSL 3

Gene AP1S1, Length 741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1-203ENST00000443943 KIF14Q15058 1648 aa34.11■■■■□ 3.05
AP1S1-203ENST00000443943 MAGI2Q86UL8 1455 aa34.1■■■■□ 3.05
AP1S1-203ENST00000443943 MYO5CQ9NQX4 1742 aa34.08■■■■□ 3.05
AP1S1-203ENST00000443943 CLIP1P30622 1438 aa34.07■■■■□ 3.04
AP1S1-203ENST00000443943 EFCAB2Q5VUJ9 269 aa34.07■■■■□ 3.04
AP1S1-203ENST00000443943 RIMS1Q86UR5 1692 aaKnown RBP34.03■■■■□ 3.04
AP1S1-203ENST00000443943 LRRIQ1Q96JM4 1722 aa34.02■■■■□ 3.04
AP1S1-203ENST00000443943 PCF11O94913 1555 aaKnown RBP34.01■■■■□ 3.03
AP1S1-203ENST00000443943 SIGLEC1Q9BZZ2 1709 aa34.01■■■■□ 3.03
AP1S1-203ENST00000443943 ARHGAP5Q13017 1502 aa33.99■■■■□ 3.03
AP1S1-203ENST00000443943 CASKIN1Q8WXD9 1431 aa33.98■■■■□ 3.03
AP1S1-203ENST00000443943 CCDC18Q5T9S5 1454 aa33.96■■■■□ 3.03
AP1S1-203ENST00000443943 MLECQ14165 292 aa33.93■■■■□ 3.02
AP1S1-203ENST00000443943 ZNF518AQ6AHZ1 1483 aa33.93■■■■□ 3.02
AP1S1-203ENST00000443943 LMTK3Q96Q04 1460 aa33.92■■■■□ 3.02
AP1S1-203ENST00000443943 ATP10AO60312 1499 aa33.91■■■■□ 3.02
AP1S1-203ENST00000443943 C9orf84Q5VXU9 1444 aa33.91■■■■□ 3.02
AP1S1-203ENST00000443943 PLPPR3Q6T4P5 718 aa33.9■■■■□ 3.02
AP1S1-203ENST00000443943 KDM5CP41229 1560 aa33.86■■■■□ 3.01
AP1S1-203ENST00000443943 FYCO1Q9BQS8 1478 aa33.86■■■■□ 3.01
AP1S1-203ENST00000443943 AFAP1Q8N556 730 aa33.85■■■■□ 3.01
AP1S1-203ENST00000443943 PREX2Q70Z35 1606 aa33.83■■■■□ 3.01
AP1S1-203ENST00000443943 FER1L4A9Z1Z3 1794 aa33.83■■■■□ 3.01
AP1S1-203ENST00000443943 CDC42BPBQ9Y5S2 1711 aa33.82■■■■□ 3
AP1S1-203ENST00000443943 ARHGEF12Q9NZN5 1544 aa33.81■■■■□ 3
AP1S1-203ENST00000443943 MYT1LQ9UL68 1186 aa33.79■■■■□ 3
AP1S1-203ENST00000443943 ABCC1P33527 1531 aa33.78■■■■□ 3
AP1S1-203ENST00000443943 DIP2CQ9Y2E4 1556 aa33.75■■■□□ 2.99
AP1S1-203ENST00000443943 HSPA2P54652 639 aa33.74■■■□□ 2.99
AP1S1-203ENST00000443943 TRAPPC8Q9Y2L5 1435 aa33.73■■■□□ 2.99
AP1S1-203ENST00000443943 MLH3Q9UHC1 1453 aa33.72■■■□□ 2.99
AP1S1-203ENST00000443943 ABCA6Q8N139 1617 aa33.7■■■□□ 2.99
AP1S1-203ENST00000443943 ITSN2Q9NZM3 1697 aa33.69■■■□□ 2.98
AP1S1-203ENST00000443943 REREQ9P2R6 1566 aa33.68■■■□□ 2.98
AP1S1-203ENST00000443943 CDC42BPAQ5VT25 1732 aa33.68■■■□□ 2.98
AP1S1-203ENST00000443943 CEBPAP49715 358 aaPredicted RBP33.62■■■□□ 2.97
AP1S1-203ENST00000443943 ZNF777Q9ULD5 760 aaPredicted RBP33.62■■■□□ 2.97
AP1S1-203ENST00000443943 FBXO41Q8TF61 875 aa33.61■■■□□ 2.97
AP1S1-203ENST00000443943 GPATCH8Q9UKJ3 1502 aaKnown RBP33.6■■■□□ 2.97
AP1S1-203ENST00000443943 SAMD9LQ8IVG5 1584 aa33.59■■■□□ 2.97
AP1S1-203ENST00000443943 AGLP35573 1532 aa33.58■■■□□ 2.97
AP1S1-203ENST00000443943 SYCP2Q9BX26 1530 aa33.57■■■□□ 2.96
AP1S1-203ENST00000443943 KIDINS220Q9ULH0 1771 aa33.56■■■□□ 2.96
AP1S1-203ENST00000443943 PREX1Q8TCU6 1659 aa33.55■■■□□ 2.96
AP1S1-203ENST00000443943 MTUS2Q5JR59 1369 aa33.54■■■□□ 2.96
AP1S1-203ENST00000443943 CCNB3Q8WWL7 1395 aa33.52■■■□□ 2.96
AP1S1-203ENST00000443943 CFDP1Q9UEE9 299 aaPredicted RBP33.49■■■□□ 2.95
AP1S1-203ENST00000443943 HNRNPMP52272 730 aaKnown RBP eCLIP33.48■■■□□ 2.95
AP1S1-203ENST00000443943 ESF1Q9H501 851 aaKnown RBP33.48■■■□□ 2.95
AP1S1-203ENST00000443943 SPAG9O60271 1321 aaKnown RBP33.48■■■□□ 2.95
AP1S1-203ENST00000443943 UHRF1BP1Q6BDS2 1440 aa33.47■■■□□ 2.95
AP1S1-203ENST00000443943 PLEKHH2Q8IVE3 1493 aa33.47■■■□□ 2.95
AP1S1-203ENST00000443943 CEP162Q5TB80 1403 aa33.46■■■□□ 2.95
AP1S1-203ENST00000443943 KIAA1107Q9UPP5 1409 aa33.45■■■□□ 2.95
AP1S1-203ENST00000443943 C3P01024 1663 aa33.43■■■□□ 2.94
AP1S1-203ENST00000443943 EHBP1L1Q8N3D4 1523 aa33.43■■■□□ 2.94
AP1S1-203ENST00000443943 ATP7AQ04656 1500 aa33.42■■■□□ 2.94
AP1S1-203ENST00000443943 CNTLNQ9NXG0 1405 aa33.4■■■□□ 2.94
AP1S1-203ENST00000443943 TIAM1Q13009 1591 aa33.38■■■□□ 2.93
AP1S1-203ENST00000443943 INO80Q9ULG1 1556 aaPredicted RBP33.38■■■□□ 2.93
AP1S1-203ENST00000443943 PLXNC1O60486 1568 aa33.32■■■□□ 2.92
AP1S1-203ENST00000443943 A2MP01023 1474 aa33.31■■■□□ 2.92
AP1S1-203ENST00000443943 ZNF644Q9H582 1327 aaPredicted RBP33.31■■■□□ 2.92
AP1S1-203ENST00000443943 SUPT6HQ7KZ85 1726 aaKnown RBP33.31■■■□□ 2.92
AP1S1-203ENST00000443943 SETD1BQ9UPS6 1966 aaKnown RBP33.31■■■□□ 2.92
AP1S1-203ENST00000443943 CERKQ8TCT0 537 aa33.3■■■□□ 2.92
AP1S1-203ENST00000443943 STRCQ7RTU9 1775 aa33.28■■■□□ 2.92
AP1S1-203ENST00000443943 DMRT2Q9Y5R5 561 aa33.27■■■□□ 2.92
AP1S1-203ENST00000443943 MROH2AA6NES4 1674 aa33.26■■■□□ 2.92
AP1S1-203ENST00000443943 MBD5Q9P267 1494 aa33.25■■■□□ 2.91
AP1S1-203ENST00000443943 ZMYM3Q14202 1370 aa33.23■■■□□ 2.91
AP1S1-203ENST00000443943 NPATQ14207 1427 aa33.23■■■□□ 2.91
AP1S1-203ENST00000443943 NCOA2Q15596 1464 aa33.21■■■□□ 2.91
AP1S1-203ENST00000443943 GGT6Q6P531 493 aa33.19■■■□□ 2.9
AP1S1-203ENST00000443943 ADGBQ8N7X0 1667 aa33.19■■■□□ 2.9
AP1S1-203ENST00000443943 CLTCQ00610 1675 aaKnown RBP33.18■■■□□ 2.9
AP1S1-203ENST00000443943 RTEL1-TNFRSF6BF6WH68 1400 aa33.16■■■□□ 2.9
AP1S1-203ENST00000443943 PTPRTO14522 1441 aa33.16■■■□□ 2.9
AP1S1-203ENST00000443943 CAMSAP2Q08AD1 1489 aa33.14■■■□□ 2.9
AP1S1-203ENST00000443943 NCOA1Q15788 1441 aa33.14■■■□□ 2.9
AP1S1-203ENST00000443943 CCDC141Q6ZP82 1450 aa33.13■■■□□ 2.89
AP1S1-203ENST00000443943 VPS8Q8N3P4 1428 aa33.11■■■□□ 2.89
AP1S1-203ENST00000443943 LOC105371045A0A1W2PR82 267 aa33.09■■■□□ 2.89
AP1S1-203ENST00000443943 PTPRKQ15262 1439 aa33.09■■■□□ 2.89
AP1S1-203ENST00000443943 CAMSAP1Q5T5Y3 1602 aa33.08■■■□□ 2.89
AP1S1-203ENST00000443943 DHX29Q7Z478 1369 aaKnown RBP33.08■■■□□ 2.89
AP1S1-203ENST00000443943 PPP6R1Q9UPN7 881 aa33.07■■■□□ 2.88
AP1S1-203ENST00000443943 MYO3AQ8NEV4 1616 aa33.06■■■□□ 2.88
AP1S1-203ENST00000443943 LRRC9Q6ZRR7 1453 aa33.04■■■□□ 2.88
AP1S1-203ENST00000443943 RSPH4AQ5TD94 716 aa33.02■■■□□ 2.88
AP1S1-203ENST00000443943 ZNF142P52746 1687 aaPredicted RBP33.01■■■□□ 2.88
AP1S1-203ENST00000443943 CEP170BQ9Y4F5 1589 aaPredicted RBP33■■■□□ 2.87
AP1S1-203ENST00000443943 ARHGEF5Q12774 1597 aa32.99■■■□□ 2.87
AP1S1-203ENST00000443943 KIF3BO15066 747 aa32.98■■■□□ 2.87
AP1S1-203ENST00000443943 NCKAP5LQ9HCH0 1330 aa32.96■■■□□ 2.87
AP1S1-203ENST00000443943 LTBP4Q8N2S1 1624 aa32.95■■■□□ 2.87
AP1S1-203ENST00000443943 PLA2R1Q13018 1463 aa32.95■■■□□ 2.87
AP1S1-203ENST00000443943 KDM5DQ9BY66 1539 aa32.93■■■□□ 2.86
AP1S1-203ENST00000443943 TSPY4P0CV99 314 aa32.92■■■□□ 2.86
AP1S1-203ENST00000443943 TSPY10P0CW01 314 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms