RNA–Protein interactions for RNA: ENST00000443878.1

RAB5A-204, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-204ENST00000443878 ZMYM4Q5VZL5 1548 aa33.63■■■□□ 2.97
RAB5A-204ENST00000443878 PREX2Q70Z35 1606 aa33.61■■■□□ 2.97
RAB5A-204ENST00000443878 POGZQ7Z3K3 1410 aa33.61■■■□□ 2.97
RAB5A-204ENST00000443878 CDC42BPBQ9Y5S2 1711 aa33.6■■■□□ 2.97
RAB5A-204ENST00000443878 MAGI2Q86UL8 1455 aa33.6■■■□□ 2.97
RAB5A-204ENST00000443878 ARHGEF40Q8TER5 1519 aa33.59■■■□□ 2.97
RAB5A-204ENST00000443878 MTUS2Q5JR59 1369 aa33.57■■■□□ 2.96
RAB5A-204ENST00000443878 ZFYVE16Q7Z3T8 1539 aa33.53■■■□□ 2.96
RAB5A-204ENST00000443878 CDC42BPAQ5VT25 1732 aa33.53■■■□□ 2.96
RAB5A-204ENST00000443878 ZNF518AQ6AHZ1 1483 aa33.52■■■□□ 2.96
RAB5A-204ENST00000443878 VPS8Q8N3P4 1428 aa33.5■■■□□ 2.95
RAB5A-204ENST00000443878 EHBP1L1Q8N3D4 1523 aa33.49■■■□□ 2.95
RAB5A-204ENST00000443878 GPATCH8Q9UKJ3 1502 aaKnown RBP33.46■■■□□ 2.95
RAB5A-204ENST00000443878 ABCC1P33527 1531 aa33.45■■■□□ 2.95
RAB5A-204ENST00000443878 ARID4BQ4LE39 1312 aaPredicted RBP33.45■■■□□ 2.95
RAB5A-204ENST00000443878 YEATS2Q9ULM3 1422 aa33.45■■■□□ 2.94
RAB5A-204ENST00000443878 KDM5CP41229 1560 aa33.44■■■□□ 2.94
RAB5A-204ENST00000443878 CCNB3Q8WWL7 1395 aa33.44■■■□□ 2.94
RAB5A-204ENST00000443878 BCORL1Q5H9F3 1711 aa33.41■■■□□ 2.94
RAB5A-204ENST00000443878 ADAMTSL3P82987 1691 aa33.4■■■□□ 2.94
RAB5A-204ENST00000443878 ITSN2Q9NZM3 1697 aa33.39■■■□□ 2.94
RAB5A-204ENST00000443878 AFAP1Q8N556 730 aa33.39■■■□□ 2.94
RAB5A-204ENST00000443878 TIAM1Q13009 1591 aa33.38■■■□□ 2.93
RAB5A-204ENST00000443878 CFDP1Q9UEE9 299 aaPredicted RBP33.37■■■□□ 2.93
RAB5A-204ENST00000443878 ATP10AO60312 1499 aa33.37■■■□□ 2.93
RAB5A-204ENST00000443878 HECW2Q9P2P5 1572 aa33.36■■■□□ 2.93
RAB5A-204ENST00000443878 ARHGEF12Q9NZN5 1544 aa33.35■■■□□ 2.93
RAB5A-204ENST00000443878 ZNF777Q9ULD5 760 aaPredicted RBP33.35■■■□□ 2.93
RAB5A-204ENST00000443878 PLEKHH2Q8IVE3 1493 aa33.35■■■□□ 2.93
RAB5A-204ENST00000443878 SAMD9LQ8IVG5 1584 aa33.34■■■□□ 2.93
RAB5A-204ENST00000443878 MLH3Q9UHC1 1453 aa33.34■■■□□ 2.93
RAB5A-204ENST00000443878 C9orf84Q5VXU9 1444 aa33.34■■■□□ 2.93
RAB5A-204ENST00000443878 TRAPPC8Q9Y2L5 1435 aa33.33■■■□□ 2.93
RAB5A-204ENST00000443878 SUPT6HQ7KZ85 1726 aaKnown RBP33.32■■■□□ 2.92
RAB5A-204ENST00000443878 MYT1LQ9UL68 1186 aa33.32■■■□□ 2.92
RAB5A-204ENST00000443878 KIAA1107Q9UPP5 1409 aa33.3■■■□□ 2.92
RAB5A-204ENST00000443878 MAP3K1Q13233 1512 aa33.3■■■□□ 2.92
RAB5A-204ENST00000443878 SYCP2Q9BX26 1530 aa33.28■■■□□ 2.92
RAB5A-204ENST00000443878 MADDQ8WXG6 1647 aa33.26■■■□□ 2.91
RAB5A-204ENST00000443878 PTPRMP28827 1452 aa33.25■■■□□ 2.91
RAB5A-204ENST00000443878 SIGLEC1Q9BZZ2 1709 aa33.25■■■□□ 2.91
RAB5A-204ENST00000443878 NCOA2Q15596 1464 aa33.25■■■□□ 2.91
RAB5A-204ENST00000443878 DIP2CQ9Y2E4 1556 aa33.24■■■□□ 2.91
RAB5A-204ENST00000443878 LRRC9Q6ZRR7 1453 aa33.24■■■□□ 2.91
RAB5A-204ENST00000443878 REREQ9P2R6 1566 aa33.23■■■□□ 2.91
RAB5A-204ENST00000443878 HNRNPMP52272 730 aaKnown RBP eCLIP33.2■■■□□ 2.91
RAB5A-204ENST00000443878 ABCA6Q8N139 1617 aa33.2■■■□□ 2.9
RAB5A-204ENST00000443878 KIDINS220Q9ULH0 1771 aa33.19■■■□□ 2.9
RAB5A-204ENST00000443878 RIMS1Q86UR5 1692 aaKnown RBP33.17■■■□□ 2.9
RAB5A-204ENST00000443878 SPAG9O60271 1321 aaKnown RBP33.16■■■□□ 2.9
RAB5A-204ENST00000443878 APLP2Q06481 763 aa33.14■■■□□ 2.9
RAB5A-204ENST00000443878 MLECQ14165 292 aa33.14■■■□□ 2.9
RAB5A-204ENST00000443878 AGLP35573 1532 aa33.12■■■□□ 2.89
RAB5A-204ENST00000443878 FER1L4A9Z1Z3 1794 aa33.11■■■□□ 2.89
RAB5A-204ENST00000443878 ZNF644Q9H582 1327 aaPredicted RBP33.1■■■□□ 2.89
RAB5A-204ENST00000443878 ATP7AQ04656 1500 aa33.09■■■□□ 2.89
RAB5A-204ENST00000443878 MBD5Q9P267 1494 aa33.08■■■□□ 2.89
RAB5A-204ENST00000443878 KANK4Q5T7N3 995 aaPredicted RBP33.08■■■□□ 2.89
RAB5A-204ENST00000443878 INO80Q9ULG1 1556 aaPredicted RBP33.08■■■□□ 2.89
RAB5A-204ENST00000443878 CAMSAP2Q08AD1 1489 aa33.05■■■□□ 2.88
RAB5A-204ENST00000443878 RSPH4AQ5TD94 716 aa33.05■■■□□ 2.88
RAB5A-204ENST00000443878 RTEL1-TNFRSF6BF6WH68 1400 aa33.01■■■□□ 2.87
RAB5A-204ENST00000443878 CCDC141Q6ZP82 1450 aa32.99■■■□□ 2.87
RAB5A-204ENST00000443878 MIA2Q96PC5 1412 aa32.98■■■□□ 2.87
RAB5A-204ENST00000443878 MYOM3Q5VTT5 1437 aa32.97■■■□□ 2.87
RAB5A-204ENST00000443878 A2MP01023 1474 aa32.96■■■□□ 2.87
RAB5A-204ENST00000443878 ARHGEF5Q12774 1597 aa32.96■■■□□ 2.87
RAB5A-204ENST00000443878 ADGBQ8N7X0 1667 aa32.95■■■□□ 2.87
RAB5A-204ENST00000443878 PLXNC1O60486 1568 aa32.94■■■□□ 2.86
RAB5A-204ENST00000443878 ESF1Q9H501 851 aaKnown RBP32.93■■■□□ 2.86
RAB5A-204ENST00000443878 PLPPR3Q6T4P5 718 aa32.89■■■□□ 2.86
RAB5A-204ENST00000443878 CNTLNQ9NXG0 1405 aa32.88■■■□□ 2.85
RAB5A-204ENST00000443878 TSPY4P0CV99 314 aa32.88■■■□□ 2.85
RAB5A-204ENST00000443878 TSPY10P0CW01 314 aa32.88■■■□□ 2.85
RAB5A-204ENST00000443878 LMTK3Q96Q04 1460 aa32.84■■■□□ 2.85
RAB5A-204ENST00000443878 DHX29Q7Z478 1369 aaKnown RBP32.82■■■□□ 2.84
RAB5A-204ENST00000443878 CEBPAP49715 358 aaPredicted RBP32.79■■■□□ 2.84
RAB5A-204ENST00000443878 PPP6R1Q9UPN7 881 aa32.79■■■□□ 2.84
RAB5A-204ENST00000443878 MAST1Q9Y2H9 1570 aa32.79■■■□□ 2.84
RAB5A-204ENST00000443878 MROH2AA6NES4 1674 aa32.78■■■□□ 2.84
RAB5A-204ENST00000443878 C3P01024 1663 aa32.78■■■□□ 2.84
RAB5A-204ENST00000443878 SETD1BQ9UPS6 1966 aaKnown RBP32.76■■■□□ 2.84
RAB5A-204ENST00000443878 PTPN23Q9H3S7 1636 aa32.76■■■□□ 2.83
RAB5A-204ENST00000443878 PREX1Q8TCU6 1659 aa32.75■■■□□ 2.83
RAB5A-204ENST00000443878 GGT6Q6P531 493 aa32.73■■■□□ 2.83
RAB5A-204ENST00000443878 FGD6Q6ZV73 1430 aa32.73■■■□□ 2.83
RAB5A-204ENST00000443878 TCOF1Q13428 1488 aaKnown RBP32.69■■■□□ 2.82
RAB5A-204ENST00000443878 CLTCQ00610 1675 aaKnown RBP32.68■■■□□ 2.82
RAB5A-204ENST00000443878 ZMYM3Q14202 1370 aa32.68■■■□□ 2.82
RAB5A-204ENST00000443878 UHRF1BP1Q6BDS2 1440 aa32.68■■■□□ 2.82
RAB5A-204ENST00000443878 KIF3BO15066 747 aa32.66■■■□□ 2.82
RAB5A-204ENST00000443878 SHANK2Q9UPX8 1470 aa32.66■■■□□ 2.82
RAB5A-204ENST00000443878 FAM135AQ9P2D6 1515 aa32.65■■■□□ 2.82
RAB5A-204ENST00000443878 NPATQ14207 1427 aa32.64■■■□□ 2.82
RAB5A-204ENST00000443878 CROCC2H7BZ55 1655 aa32.63■■■□□ 2.81
RAB5A-204ENST00000443878 HSPA2P54652 639 aa32.62■■■□□ 2.81
RAB5A-204ENST00000443878 DNMT1P26358 1616 aaKnown RBP32.62■■■□□ 2.81
RAB5A-204ENST00000443878 ABCC5O15440 1437 aa32.61■■■□□ 2.81
RAB5A-204ENST00000443878 DAPK1P53355 1430 aa32.6■■■□□ 2.81
RAB5A-204ENST00000443878 EIF2AK4Q9P2K8 1649 aaKnown RBP32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms