RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
SMPD4P1-203ENST00000443839 ASXL2Q76L83 1435 aa14.2□□□□□ -0.14
SMPD4P1-203ENST00000443839 CCER1Q8TC90 406 aaPredicted RBP14.2□□□□□ -0.14
SMPD4P1-203ENST00000443839 CAMSAP2Q08AD1 1489 aa14.2□□□□□ -0.14
SMPD4P1-203ENST00000443839 PREX2Q70Z35 1606 aa14.19□□□□□ -0.14
SMPD4P1-203ENST00000443839 PTPRKQ15262 1439 aa14.18□□□□□ -0.14
SMPD4P1-203ENST00000443839 MYO5CQ9NQX4 1742 aa14.18□□□□□ -0.14
SMPD4P1-203ENST00000443839 ARHGAP5Q13017 1502 aa14.17□□□□□ -0.14
SMPD4P1-203ENST00000443839 CDC42BPBQ9Y5S2 1711 aa14.16□□□□□ -0.14
SMPD4P1-203ENST00000443839 SETD5Q9C0A6 1442 aa14.16□□□□□ -0.14
SMPD4P1-203ENST00000443839 DNMT1P26358 1616 aaKnown RBP14.16□□□□□ -0.14
SMPD4P1-203ENST00000443839 DAPK1P53355 1430 aa14.15□□□□□ -0.14
SMPD4P1-203ENST00000443839 RAB3GAP2Q9H2M9 1393 aa14.14□□□□□ -0.15
SMPD4P1-203ENST00000443839 CHIC2Q9UKJ5 165 aa14.14□□□□□ -0.15
SMPD4P1-203ENST00000443839 ABCC5O15440 1437 aa14.14□□□□□ -0.15
SMPD4P1-203ENST00000443839 PLCH2O75038 1416 aa14.13□□□□□ -0.15
SMPD4P1-203ENST00000443839 HFM1A2PYH4 1435 aa14.12□□□□□ -0.15
SMPD4P1-203ENST00000443839 ABCA9Q8IUA7 1624 aa14.12□□□□□ -0.15
SMPD4P1-203ENST00000443839 SAMD9LQ8IVG5 1584 aa14.11□□□□□ -0.15
SMPD4P1-203ENST00000443839 EFCAB2Q5VUJ9 269 aa14.11□□□□□ -0.15
SMPD4P1-203ENST00000443839 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
SMPD4P1-203ENST00000443839 RRP7BPQ9NSQ0 103 aa14.1□□□□□ -0.15
SMPD4P1-203ENST00000443839 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
SMPD4P1-203ENST00000443839 NAIPQ13075 1403 aa14.09□□□□□ -0.15
SMPD4P1-203ENST00000443839 AKNAQ7Z591 1439 aa14.09□□□□□ -0.15
SMPD4P1-203ENST00000443839 ARAP3Q8WWN8 1544 aa14.09□□□□□ -0.15
SMPD4P1-203ENST00000443839 CROCC2H7BZ55 1655 aa14.09□□□□□ -0.15
SMPD4P1-203ENST00000443839 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMPD4P1-203ENST00000443839 PLEKHH2Q8IVE3 1493 aa14.09□□□□□ -0.15
SMPD4P1-203ENST00000443839 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
SMPD4P1-203ENST00000443839 ARHGEF5Q12774 1597 aa14.08□□□□□ -0.16
SMPD4P1-203ENST00000443839 SYCP2Q9BX26 1530 aa14.08□□□□□ -0.16
SMPD4P1-203ENST00000443839 CCDC141Q6ZP82 1450 aa14.07□□□□□ -0.16
SMPD4P1-203ENST00000443839 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
SMPD4P1-203ENST00000443839 TSPY4P0CV99 314 aa14.06□□□□□ -0.16
SMPD4P1-203ENST00000443839 TSPY10P0CW01 314 aa14.06□□□□□ -0.16
SMPD4P1-203ENST00000443839 GCC2Q8IWJ2 1684 aa14.06□□□□□ -0.16
SMPD4P1-203ENST00000443839 SHANK2Q9UPX8 1470 aa14.06□□□□□ -0.16
SMPD4P1-203ENST00000443839 KIAA1107Q9UPP5 1409 aa14.06□□□□□ -0.16
SMPD4P1-203ENST00000443839 RSPH4AQ5TD94 716 aa14.06□□□□□ -0.16
SMPD4P1-203ENST00000443839 ADGBQ8N7X0 1667 aa14.06□□□□□ -0.16
SMPD4P1-203ENST00000443839 FANCAO15360 1455 aa14.06□□□□□ -0.16
SMPD4P1-203ENST00000443839 DHX57Q6P158 1386 aaKnown RBP14.05□□□□□ -0.16
SMPD4P1-203ENST00000443839 C9orf84Q5VXU9 1444 aa14.05□□□□□ -0.16
SMPD4P1-203ENST00000443839 CD109Q6YHK3 1445 aa14.04□□□□□ -0.16
SMPD4P1-203ENST00000443839 ANKRD30AQ9BXX3 1397 aa14.04□□□□□ -0.16
SMPD4P1-203ENST00000443839 ABCC1P33527 1531 aa14.04□□□□□ -0.16
SMPD4P1-203ENST00000443839 ADGRL2O95490 1459 aa14.03□□□□□ -0.16
SMPD4P1-203ENST00000443839 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
SMPD4P1-203ENST00000443839 ARHGEF12Q9NZN5 1544 aa14.01□□□□□ -0.17
SMPD4P1-203ENST00000443839 ADGRL1O94910 1474 aa13.99□□□□□ -0.17
SMPD4P1-203ENST00000443839 KDM6BO15054 1643 aa13.99□□□□□ -0.17
SMPD4P1-203ENST00000443839 CFAP74Q9C0B2 1584 aa13.98□□□□□ -0.17
SMPD4P1-203ENST00000443839 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
SMPD4P1-203ENST00000443839 GLI2P10070 1586 aa13.97□□□□□ -0.17
SMPD4P1-203ENST00000443839 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
SMPD4P1-203ENST00000443839 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
SMPD4P1-203ENST00000443839 KIF15Q9NS87 1388 aa13.97□□□□□ -0.17
SMPD4P1-203ENST00000443839 DIP2BQ9P265 1576 aa13.97□□□□□ -0.17
SMPD4P1-203ENST00000443839 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
SMPD4P1-203ENST00000443839 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.17
SMPD4P1-203ENST00000443839 MAP3K4Q9Y6R4 1608 aa13.96□□□□□ -0.17
SMPD4P1-203ENST00000443839 TRIM52Q96A61 297 aa13.96□□□□□ -0.17
SMPD4P1-203ENST00000443839 ANKRD50Q9ULJ7 1429 aa13.96□□□□□ -0.18
SMPD4P1-203ENST00000443839 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
SMPD4P1-203ENST00000443839 AFAP1Q8N556 730 aa13.95□□□□□ -0.18
SMPD4P1-203ENST00000443839 SPAG9O60271 1321 aaKnown RBP13.94□□□□□ -0.18
SMPD4P1-203ENST00000443839 NEO1Q92859 1461 aa13.93□□□□□ -0.18
SMPD4P1-203ENST00000443839 PLXNC1O60486 1568 aa13.93□□□□□ -0.18
SMPD4P1-203ENST00000443839 ADRA2BP18089 450 aa13.92□□□□□ -0.18
SMPD4P1-203ENST00000443839 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
SMPD4P1-203ENST00000443839 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
SMPD4P1-203ENST00000443839 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
SMPD4P1-203ENST00000443839 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
SMPD4P1-203ENST00000443839 TSPOAP1O95153 1857 aa13.89□□□□□ -0.19
SMPD4P1-203ENST00000443839 POGZQ7Z3K3 1410 aa13.89□□□□□ -0.19
SMPD4P1-203ENST00000443839 ATP7AQ04656 1500 aa13.89□□□□□ -0.19
SMPD4P1-203ENST00000443839 DUOX2Q9NRD8 1548 aa13.89□□□□□ -0.19
SMPD4P1-203ENST00000443839 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
SMPD4P1-203ENST00000443839 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
SMPD4P1-203ENST00000443839 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
SMPD4P1-203ENST00000443839 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
SMPD4P1-203ENST00000443839 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
SMPD4P1-203ENST00000443839 TEX14Q8IWB6 1497 aa13.86□□□□□ -0.19
SMPD4P1-203ENST00000443839 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
SMPD4P1-203ENST00000443839 ERBINQ96RT1 1412 aa13.86□□□□□ -0.19
SMPD4P1-203ENST00000443839 KDM5CP41229 1560 aa13.85□□□□□ -0.19
SMPD4P1-203ENST00000443839 NUP155O75694 1391 aa13.85□□□□□ -0.19
SMPD4P1-203ENST00000443839 PPRC1Q5VV67 1664 aaKnown RBP13.84□□□□□ -0.19
SMPD4P1-203ENST00000443839 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
SMPD4P1-203ENST00000443839 PZPP20742 1482 aa13.83□□□□□ -0.2
SMPD4P1-203ENST00000443839 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
SMPD4P1-203ENST00000443839 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.2
SMPD4P1-203ENST00000443839 NEUROD1Q13562 356 aa13.82□□□□□ -0.2
SMPD4P1-203ENST00000443839 SIN3AQ96ST3 1273 aa13.82□□□□□ -0.2
SMPD4P1-203ENST00000443839 MLH3Q9UHC1 1453 aa13.82□□□□□ -0.2
SMPD4P1-203ENST00000443839 KDM5DQ9BY66 1539 aa13.81□□□□□ -0.2
SMPD4P1-203ENST00000443839 RICTORQ6R327 1708 aa13.81□□□□□ -0.2
SMPD4P1-203ENST00000443839 FOXD1Q16676 465 aa13.81□□□□□ -0.2
SMPD4P1-203ENST00000443839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms