RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 AKNAQ7Z591 1439 aa20.47■□□□□ 0.87
PDLIM2-212ENST00000443561 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-212ENST00000443561 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-212ENST00000443561 SAMD9LQ8IVG5 1584 aa20.46■□□□□ 0.87
PDLIM2-212ENST00000443561 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
PDLIM2-212ENST00000443561 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-212ENST00000443561 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
PDLIM2-212ENST00000443561 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
PDLIM2-212ENST00000443561 ABCC1P33527 1531 aa20.43■□□□□ 0.86
PDLIM2-212ENST00000443561 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
PDLIM2-212ENST00000443561 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
PDLIM2-212ENST00000443561 ADGRL1O94910 1474 aa20.41■□□□□ 0.86
PDLIM2-212ENST00000443561 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
PDLIM2-212ENST00000443561 DENND4BO75064 1496 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-212ENST00000443561 POGZQ7Z3K3 1410 aa20.38■□□□□ 0.85
PDLIM2-212ENST00000443561 RAPGEF3O95398 923 aa20.38■□□□□ 0.85
PDLIM2-212ENST00000443561 SIGLEC1Q9BZZ2 1709 aa20.38■□□□□ 0.85
PDLIM2-212ENST00000443561 KDM5CP41229 1560 aa20.38■□□□□ 0.85
PDLIM2-212ENST00000443561 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
PDLIM2-212ENST00000443561 ARHGEF40Q8TER5 1519 aa20.35■□□□□ 0.85
PDLIM2-212ENST00000443561 SYCP2Q9BX26 1530 aa20.35■□□□□ 0.85
PDLIM2-212ENST00000443561 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
PDLIM2-212ENST00000443561 EFCAB2Q5VUJ9 269 aa20.33■□□□□ 0.85
PDLIM2-212ENST00000443561 TRAPPC8Q9Y2L5 1435 aa20.33■□□□□ 0.84
PDLIM2-212ENST00000443561 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
PDLIM2-212ENST00000443561 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
PDLIM2-212ENST00000443561 ZNF644Q9H582 1327 aaPredicted RBP20.28■□□□□ 0.84
PDLIM2-212ENST00000443561 ZNF518AQ6AHZ1 1483 aa20.28■□□□□ 0.84
PDLIM2-212ENST00000443561 HECW2Q9P2P5 1572 aa20.28■□□□□ 0.84
PDLIM2-212ENST00000443561 ABCA6Q8N139 1617 aa20.27■□□□□ 0.84
PDLIM2-212ENST00000443561 CAMSAP2Q08AD1 1489 aa20.27■□□□□ 0.84
PDLIM2-212ENST00000443561 MBD5Q9P267 1494 aa20.27■□□□□ 0.84
PDLIM2-212ENST00000443561 ZFYVE16Q7Z3T8 1539 aa20.27■□□□□ 0.83
PDLIM2-212ENST00000443561 DIP2CQ9Y2E4 1556 aa20.25■□□□□ 0.83
PDLIM2-212ENST00000443561 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
PDLIM2-212ENST00000443561 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
PDLIM2-212ENST00000443561 INO80Q9ULG1 1556 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-212ENST00000443561 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-212ENST00000443561 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
PDLIM2-212ENST00000443561 MAGI2Q86UL8 1455 aa20.23■□□□□ 0.83
PDLIM2-212ENST00000443561 ZNF777Q9ULD5 760 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-212ENST00000443561 PLEKHH2Q8IVE3 1493 aa20.21■□□□□ 0.83
PDLIM2-212ENST00000443561 MLH3Q9UHC1 1453 aa20.21■□□□□ 0.83
PDLIM2-212ENST00000443561 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDLIM2-212ENST00000443561 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
PDLIM2-212ENST00000443561 PTPN23Q9H3S7 1636 aa20.19■□□□□ 0.82
PDLIM2-212ENST00000443561 MIA2Q96PC5 1412 aa20.18■□□□□ 0.82
PDLIM2-212ENST00000443561 BCORL1Q5H9F3 1711 aa20.17■□□□□ 0.82
PDLIM2-212ENST00000443561 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-212ENST00000443561 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
PDLIM2-212ENST00000443561 KDM4FA0A1W2PPD8 638 aa20.16■□□□□ 0.82
PDLIM2-212ENST00000443561 FGD6Q6ZV73 1430 aa20.16■□□□□ 0.82
PDLIM2-212ENST00000443561 REREQ9P2R6 1566 aa20.16■□□□□ 0.82
PDLIM2-212ENST00000443561 CROCC2H7BZ55 1655 aa20.16■□□□□ 0.82
PDLIM2-212ENST00000443561 ADAMTSL3P82987 1691 aa20.16■□□□□ 0.82
PDLIM2-212ENST00000443561 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
PDLIM2-212ENST00000443561 APLP2Q06481 763 aa20.15■□□□□ 0.82
PDLIM2-212ENST00000443561 ATP10AO60312 1499 aa20.13■□□□□ 0.81
PDLIM2-212ENST00000443561 CCDC141Q6ZP82 1450 aa20.13■□□□□ 0.81
PDLIM2-212ENST00000443561 PLXNC1O60486 1568 aa20.12■□□□□ 0.81
PDLIM2-212ENST00000443561 C9orf84Q5VXU9 1444 aa20.11■□□□□ 0.81
PDLIM2-212ENST00000443561 MAST1Q9Y2H9 1570 aa20.11■□□□□ 0.81
PDLIM2-212ENST00000443561 DNMT1P26358 1616 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-212ENST00000443561 PPARGC1BQ86YN6 1023 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-212ENST00000443561 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
PDLIM2-212ENST00000443561 AGLP35573 1532 aa20.06■□□□□ 0.8
PDLIM2-212ENST00000443561 SPAG9O60271 1321 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-212ENST00000443561 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
PDLIM2-212ENST00000443561 ABCC5O15440 1437 aa20.05■□□□□ 0.8
PDLIM2-212ENST00000443561 RIMS1Q86UR5 1692 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-212ENST00000443561 FER1L4A9Z1Z3 1794 aa20.02■□□□□ 0.8
PDLIM2-212ENST00000443561 DAPK1P53355 1430 aa20.02■□□□□ 0.79
PDLIM2-212ENST00000443561 SHANK2Q9UPX8 1470 aa20.01■□□□□ 0.79
PDLIM2-212ENST00000443561 A2MP01023 1474 aa20■□□□□ 0.79
PDLIM2-212ENST00000443561 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
PDLIM2-212ENST00000443561 RRBP1Q9P2E9 1410 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-212ENST00000443561 RSPH4AQ5TD94 716 aa19.94■□□□□ 0.78
PDLIM2-212ENST00000443561 ARID4BQ4LE39 1312 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-212ENST00000443561 PTPRMP28827 1452 aa19.93■□□□□ 0.78
PDLIM2-212ENST00000443561 MYT1LQ9UL68 1186 aa19.93■□□□□ 0.78
PDLIM2-212ENST00000443561 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
PDLIM2-212ENST00000443561 ADGRL2O95490 1459 aa19.92■□□□□ 0.78
PDLIM2-212ENST00000443561 RNF17Q9BXT8 1623 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-212ENST00000443561 DHX29Q7Z478 1369 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-212ENST00000443561 EIF2AK4Q9P2K8 1649 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-212ENST00000443561 MLECQ14165 292 aa19.89■□□□□ 0.77
PDLIM2-212ENST00000443561 C3P01024 1663 aa19.88■□□□□ 0.77
PDLIM2-212ENST00000443561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.88■□□□□ 0.77
PDLIM2-212ENST00000443561 CLTCQ00610 1675 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-212ENST00000443561 DUOX2Q9NRD8 1548 aa19.87■□□□□ 0.77
PDLIM2-212ENST00000443561 FAM50AQ14320 339 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-212ENST00000443561 NCOA1Q15788 1441 aa19.86■□□□□ 0.77
PDLIM2-212ENST00000443561 MROH2AA6NES4 1674 aa19.86■□□□□ 0.77
PDLIM2-212ENST00000443561 KIF15Q9NS87 1388 aa19.85■□□□□ 0.77
PDLIM2-212ENST00000443561 DEPDC5O75140 1603 aa19.85■□□□□ 0.77
PDLIM2-212ENST00000443561 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
PDLIM2-212ENST00000443561 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
PDLIM2-212ENST00000443561 CHIC2Q9UKJ5 165 aa19.82■□□□□ 0.76
PDLIM2-212ENST00000443561 CEP152O94986 1710 aa19.81■□□□□ 0.76
PDLIM2-212ENST00000443561 ERBINQ96RT1 1412 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms