RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 MYOM3Q5VTT5 1437 aa20.95■□□□□ 0.95
TM9SF4-204ENST00000442842 FANCAO15360 1455 aa20.95■□□□□ 0.94
TM9SF4-204ENST00000442842 ARAP3Q8WWN8 1544 aa20.94■□□□□ 0.94
TM9SF4-204ENST00000442842 CDC42BPBQ9Y5S2 1711 aa20.94■□□□□ 0.94
TM9SF4-204ENST00000442842 CFAP74Q9C0B2 1584 aa20.93■□□□□ 0.94
TM9SF4-204ENST00000442842 CFDP1Q9UEE9 299 aaPredicted RBP20.93■□□□□ 0.94
TM9SF4-204ENST00000442842 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
TM9SF4-204ENST00000442842 EFCAB2Q5VUJ9 269 aa20.9■□□□□ 0.94
TM9SF4-204ENST00000442842 NEO1Q92859 1461 aa20.89■□□□□ 0.94
TM9SF4-204ENST00000442842 SAMD9LQ8IVG5 1584 aa20.89■□□□□ 0.93
TM9SF4-204ENST00000442842 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
TM9SF4-204ENST00000442842 AKNAQ7Z591 1439 aa20.87■□□□□ 0.93
TM9SF4-204ENST00000442842 ADGRL1O94910 1474 aa20.87■□□□□ 0.93
TM9SF4-204ENST00000442842 CAMSAP2Q08AD1 1489 aa20.87■□□□□ 0.93
TM9SF4-204ENST00000442842 MIA2Q96PC5 1412 aa20.87■□□□□ 0.93
TM9SF4-204ENST00000442842 ABCC1P33527 1531 aa20.85■□□□□ 0.93
TM9SF4-204ENST00000442842 PTPN23Q9H3S7 1636 aa20.85■□□□□ 0.93
TM9SF4-204ENST00000442842 ZNF644Q9H582 1327 aaPredicted RBP20.84■□□□□ 0.93
TM9SF4-204ENST00000442842 SYCP2Q9BX26 1530 aa20.83■□□□□ 0.93
TM9SF4-204ENST00000442842 SCAPERQ9BY12 1400 aa20.81■□□□□ 0.92
TM9SF4-204ENST00000442842 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
TM9SF4-204ENST00000442842 KDM6BO15054 1643 aa20.8■□□□□ 0.92
TM9SF4-204ENST00000442842 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
TM9SF4-204ENST00000442842 TCOF1Q13428 1488 aaKnown RBP20.79■□□□□ 0.92
TM9SF4-204ENST00000442842 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
TM9SF4-204ENST00000442842 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
TM9SF4-204ENST00000442842 RRBP1Q9P2E9 1410 aaKnown RBP20.77■□□□□ 0.91
TM9SF4-204ENST00000442842 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.913e-7■■■□□ 15.8
TM9SF4-204ENST00000442842 POGZQ7Z3K3 1410 aa20.76■□□□□ 0.91
TM9SF4-204ENST00000442842 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
TM9SF4-204ENST00000442842 COL17A1Q9UMD9 1497 aaPredicted RBP20.75■□□□□ 0.91
TM9SF4-204ENST00000442842 FRMPD1Q5SYB0 1578 aa20.74■□□□□ 0.91
TM9SF4-204ENST00000442842 TRAPPC8Q9Y2L5 1435 aa20.74■□□□□ 0.91
TM9SF4-204ENST00000442842 RAPGEF3O95398 923 aa20.73■□□□□ 0.91
TM9SF4-204ENST00000442842 ZNF518AQ6AHZ1 1483 aa20.73■□□□□ 0.91
TM9SF4-204ENST00000442842 CCDC141Q6ZP82 1450 aa20.73■□□□□ 0.91
TM9SF4-204ENST00000442842 MBD5Q9P267 1494 aa20.72■□□□□ 0.91
TM9SF4-204ENST00000442842 ARHGEF5Q12774 1597 aa20.71■□□□□ 0.91
TM9SF4-204ENST00000442842 RICTORQ6R327 1708 aa20.7■□□□□ 0.9
TM9SF4-204ENST00000442842 DNMT1P26358 1616 aaKnown RBP20.69■□□□□ 0.9
TM9SF4-204ENST00000442842 ITGAEP38570 1179 aa20.69■□□□□ 0.9
TM9SF4-204ENST00000442842 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
TM9SF4-204ENST00000442842 DAPK1P53355 1430 aa20.68■□□□□ 0.9
TM9SF4-204ENST00000442842 MYT1LQ9UL68 1186 aa20.67■□□□□ 0.9
TM9SF4-204ENST00000442842 KDM5CP41229 1560 aa20.67■□□□□ 0.9
TM9SF4-204ENST00000442842 ABCC5O15440 1437 aa20.66■□□□□ 0.9
TM9SF4-204ENST00000442842 CROCC2H7BZ55 1655 aa20.66■□□□□ 0.9
TM9SF4-204ENST00000442842 HECW2Q9P2P5 1572 aa20.65■□□□□ 0.9
TM9SF4-204ENST00000442842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.65■□□□□ 0.9
TM9SF4-204ENST00000442842 ZMYM4Q5VZL5 1548 aa20.64■□□□□ 0.9
TM9SF4-204ENST00000442842 SPAG9O60271 1321 aaKnown RBP20.64■□□□□ 0.89
TM9SF4-204ENST00000442842 ZFYVE16Q7Z3T8 1539 aa20.63■□□□□ 0.89
TM9SF4-204ENST00000442842 C9orf84Q5VXU9 1444 aa20.63■□□□□ 0.89
TM9SF4-204ENST00000442842 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
TM9SF4-204ENST00000442842 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
TM9SF4-204ENST00000442842 ATP7AQ04656 1500 aa20.62■□□□□ 0.89
TM9SF4-204ENST00000442842 TSPY4P0CV99 314 aa20.61■□□□□ 0.89
TM9SF4-204ENST00000442842 TSPY10P0CW01 314 aa20.61■□□□□ 0.89
TM9SF4-204ENST00000442842 RSPH4AQ5TD94 716 aa20.61■□□□□ 0.89
TM9SF4-204ENST00000442842 MAST1Q9Y2H9 1570 aa20.59■□□□□ 0.89
TM9SF4-204ENST00000442842 CHIC2Q9UKJ5 165 aa20.59■□□□□ 0.89
TM9SF4-204ENST00000442842 YEATS2Q9ULM3 1422 aa20.59■□□□□ 0.89
TM9SF4-204ENST00000442842 ARHGEF40Q8TER5 1519 aa20.58■□□□□ 0.89
TM9SF4-204ENST00000442842 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.89
TM9SF4-204ENST00000442842 PTPRKQ15262 1439 aa20.58■□□□□ 0.88
TM9SF4-204ENST00000442842 ABCA6Q8N139 1617 aa20.56■□□□□ 0.88
TM9SF4-204ENST00000442842 MAGI2Q86UL8 1455 aa20.56■□□□□ 0.88
TM9SF4-204ENST00000442842 KIDINS220Q9ULH0 1771 aa20.56■□□□□ 0.88
TM9SF4-204ENST00000442842 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
TM9SF4-204ENST00000442842 ADGBQ8N7X0 1667 aa20.55■□□□□ 0.88
TM9SF4-204ENST00000442842 RTEL1-TNFRSF6BF6WH68 1400 aa20.54■□□□□ 0.88
TM9SF4-204ENST00000442842 PLXNC1O60486 1568 aa20.53■□□□□ 0.88
TM9SF4-204ENST00000442842 ADGRL2O95490 1459 aa20.51■□□□□ 0.87
TM9SF4-204ENST00000442842 ANKRD30AQ9BXX3 1397 aa20.51■□□□□ 0.87
TM9SF4-204ENST00000442842 KIF15Q9NS87 1388 aa20.49■□□□□ 0.87
TM9SF4-204ENST00000442842 TRIM26Q12899 539 aaPredicted RBP20.49■□□□□ 0.87
TM9SF4-204ENST00000442842 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
TM9SF4-204ENST00000442842 ATP10AO60312 1499 aa20.47■□□□□ 0.87
TM9SF4-204ENST00000442842 A2MP01023 1474 aa20.47■□□□□ 0.87
TM9SF4-204ENST00000442842 ROCK1Q13464 1354 aa20.46■□□□□ 0.87
TM9SF4-204ENST00000442842 NCOA1Q15788 1441 aa20.46■□□□□ 0.87
TM9SF4-204ENST00000442842 DUOX2Q9NRD8 1548 aa20.44■□□□□ 0.86
TM9SF4-204ENST00000442842 REREQ9P2R6 1566 aa20.42■□□□□ 0.86
TM9SF4-204ENST00000442842 SIGLEC1Q9BZZ2 1709 aa20.41■□□□□ 0.86
TM9SF4-204ENST00000442842 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
TM9SF4-204ENST00000442842 ARID4BQ4LE39 1312 aaPredicted RBP20.4■□□□□ 0.86
TM9SF4-204ENST00000442842 GCC2Q8IWJ2 1684 aa20.4■□□□□ 0.86
TM9SF4-204ENST00000442842 HFM1A2PYH4 1435 aa20.39■□□□□ 0.85
TM9SF4-204ENST00000442842 NAIPQ13075 1403 aa20.39■□□□□ 0.85
TM9SF4-204ENST00000442842 ERBINQ96RT1 1412 aa20.39■□□□□ 0.85
TM9SF4-204ENST00000442842 ANKRD50Q9ULJ7 1429 aa20.38■□□□□ 0.85
TM9SF4-204ENST00000442842 EIF2AK4Q9P2K8 1649 aaKnown RBP20.36■□□□□ 0.85
TM9SF4-204ENST00000442842 AGLP35573 1532 aa20.35■□□□□ 0.85
TM9SF4-204ENST00000442842 MLECQ14165 292 aa20.34■□□□□ 0.85
TM9SF4-204ENST00000442842 KIF3BO15066 747 aa20.33■□□□□ 0.85
TM9SF4-204ENST00000442842 PCGF6Q9BYE7 350 aa20.33■□□□□ 0.85
TM9SF4-204ENST00000442842 SETD5Q9C0A6 1442 aa20.31■□□□□ 0.84
TM9SF4-204ENST00000442842 RNF17Q9BXT8 1623 aaKnown RBP20.29■□□□□ 0.84
TM9SF4-204ENST00000442842 GGT6Q6P531 493 aa20.29■□□□□ 0.84
TM9SF4-204ENST00000442842 BCORL1Q5H9F3 1711 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms