RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 ARHGAP5Q13017 1502 aa19.41■□□□□ 0.7
ERGIC3-208ENST00000442139 EFCAB2Q5VUJ9 269 aa19.41■□□□□ 0.7
ERGIC3-208ENST00000442139 CCNB3Q8WWL7 1395 aa19.41■□□□□ 0.7
ERGIC3-208ENST00000442139 NCOA2Q15596 1464 aa19.4■□□□□ 0.7
ERGIC3-208ENST00000442139 GPATCH8Q9UKJ3 1502 aaKnown RBP19.37■□□□□ 0.69
ERGIC3-208ENST00000442139 AKNAQ7Z591 1439 aa19.36■□□□□ 0.69
ERGIC3-208ENST00000442139 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
ERGIC3-208ENST00000442139 RICTORQ6R327 1708 aa19.33■□□□□ 0.68
ERGIC3-208ENST00000442139 ADGRL1O94910 1474 aa19.33■□□□□ 0.68
ERGIC3-208ENST00000442139 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
ERGIC3-208ENST00000442139 CFDP1Q9UEE9 299 aaPredicted RBP19.32■□□□□ 0.68
ERGIC3-208ENST00000442139 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
ERGIC3-208ENST00000442139 MIA2Q96PC5 1412 aa19.31■□□□□ 0.68
ERGIC3-208ENST00000442139 ABCC1P33527 1531 aa19.3■□□□□ 0.68
ERGIC3-208ENST00000442139 SAMD9LQ8IVG5 1584 aa19.29■□□□□ 0.68
ERGIC3-208ENST00000442139 MYOM3Q5VTT5 1437 aa19.29■□□□□ 0.68
ERGIC3-208ENST00000442139 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
ERGIC3-208ENST00000442139 ZMYM4Q5VZL5 1548 aa19.27■□□□□ 0.68
ERGIC3-208ENST00000442139 ZNF518AQ6AHZ1 1483 aa19.27■□□□□ 0.67
ERGIC3-208ENST00000442139 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
ERGIC3-208ENST00000442139 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
ERGIC3-208ENST00000442139 MAGI2Q86UL8 1455 aa19.25■□□□□ 0.67
ERGIC3-208ENST00000442139 FRMPD1Q5SYB0 1578 aa19.24■□□□□ 0.67
ERGIC3-208ENST00000442139 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
ERGIC3-208ENST00000442139 KDM5CP41229 1560 aa19.23■□□□□ 0.67
ERGIC3-208ENST00000442139 RSPH4AQ5TD94 716 aa19.22■□□□□ 0.67
ERGIC3-208ENST00000442139 PTPN23Q9H3S7 1636 aa19.22■□□□□ 0.67
ERGIC3-208ENST00000442139 SYCP2Q9BX26 1530 aa19.21■□□□□ 0.67
ERGIC3-208ENST00000442139 ARHGEF5Q12774 1597 aa19.21■□□□□ 0.67
ERGIC3-208ENST00000442139 CAMSAP2Q08AD1 1489 aa19.21■□□□□ 0.67
ERGIC3-208ENST00000442139 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
ERGIC3-208ENST00000442139 HECW2Q9P2P5 1572 aa19.19■□□□□ 0.66
ERGIC3-208ENST00000442139 FGD6Q6ZV73 1430 aa19.19■□□□□ 0.66
ERGIC3-208ENST00000442139 ARHGEF40Q8TER5 1519 aa19.17■□□□□ 0.66
ERGIC3-208ENST00000442139 TCOF1Q13428 1488 aaKnown RBP19.16■□□□□ 0.66
ERGIC3-208ENST00000442139 MLH3Q9UHC1 1453 aa19.16■□□□□ 0.66
ERGIC3-208ENST00000442139 RAPGEF3O95398 923 aa19.16■□□□□ 0.66
ERGIC3-208ENST00000442139 ZFYVE16Q7Z3T8 1539 aa19.15■□□□□ 0.66
ERGIC3-208ENST00000442139 ARHGEF12Q9NZN5 1544 aa19.15■□□□□ 0.66
ERGIC3-208ENST00000442139 CCDC141Q6ZP82 1450 aa19.15■□□□□ 0.66
ERGIC3-208ENST00000442139 MBD5Q9P267 1494 aa19.14■□□□□ 0.65
ERGIC3-208ENST00000442139 CROCC2H7BZ55 1655 aa19.13■□□□□ 0.65
ERGIC3-208ENST00000442139 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
ERGIC3-208ENST00000442139 TRAPPC8Q9Y2L5 1435 aa19.12■□□□□ 0.65
ERGIC3-208ENST00000442139 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
ERGIC3-208ENST00000442139 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
ERGIC3-208ENST00000442139 DNMT1P26358 1616 aaKnown RBP19.11■□□□□ 0.65
ERGIC3-208ENST00000442139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
ERGIC3-208ENST00000442139 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
ERGIC3-208ENST00000442139 RTEL1-TNFRSF6BF6WH68 1400 aa19.1■□□□□ 0.65
ERGIC3-208ENST00000442139 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.65
ERGIC3-208ENST00000442139 REREQ9P2R6 1566 aa19.1■□□□□ 0.65
ERGIC3-208ENST00000442139 ATP7AQ04656 1500 aa19.1■□□□□ 0.65
ERGIC3-208ENST00000442139 ZNF644Q9H582 1327 aaPredicted RBP19.09■□□□□ 0.65
ERGIC3-208ENST00000442139 AFAP1Q8N556 730 aa19.09■□□□□ 0.65
ERGIC3-208ENST00000442139 SHANK2Q9UPX8 1470 aa19.09■□□□□ 0.65
ERGIC3-208ENST00000442139 SPAG9O60271 1321 aaKnown RBP19.08■□□□□ 0.65
ERGIC3-208ENST00000442139 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
ERGIC3-208ENST00000442139 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
ERGIC3-208ENST00000442139 ATP10AO60312 1499 aa19.06■□□□□ 0.64
ERGIC3-208ENST00000442139 ABCA6Q8N139 1617 aa19.06■□□□□ 0.64
ERGIC3-208ENST00000442139 DIP2CQ9Y2E4 1556 aa19.06■□□□□ 0.64
ERGIC3-208ENST00000442139 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
ERGIC3-208ENST00000442139 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
ERGIC3-208ENST00000442139 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
ERGIC3-208ENST00000442139 PLXNC1O60486 1568 aa19.04■□□□□ 0.64
ERGIC3-208ENST00000442139 DAPK1P53355 1430 aa19.02■□□□□ 0.64
ERGIC3-208ENST00000442139 YEATS2Q9ULM3 1422 aa19■□□□□ 0.63
ERGIC3-208ENST00000442139 FAM50AQ14320 339 aaKnown RBP19■□□□□ 0.63
ERGIC3-208ENST00000442139 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
ERGIC3-208ENST00000442139 AGLP35573 1532 aa19■□□□□ 0.63
ERGIC3-208ENST00000442139 ABCC5O15440 1437 aa19■□□□□ 0.63
ERGIC3-208ENST00000442139 BCORL1Q5H9F3 1711 aa18.97■□□□□ 0.63
ERGIC3-208ENST00000442139 A2MP01023 1474 aa18.96■□□□□ 0.63
ERGIC3-208ENST00000442139 EIF2AK4Q9P2K8 1649 aaKnown RBP18.96■□□□□ 0.63
ERGIC3-208ENST00000442139 ADGRL2O95490 1459 aa18.95■□□□□ 0.62
ERGIC3-208ENST00000442139 ANKRD30AQ9BXX3 1397 aa18.94■□□□□ 0.62
ERGIC3-208ENST00000442139 DUOX2Q9NRD8 1548 aa18.94■□□□□ 0.62
ERGIC3-208ENST00000442139 ROCK1Q13464 1354 aa18.92■□□□□ 0.62
ERGIC3-208ENST00000442139 ARID4BQ4LE39 1312 aaPredicted RBP18.91■□□□□ 0.62
ERGIC3-208ENST00000442139 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
ERGIC3-208ENST00000442139 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
ERGIC3-208ENST00000442139 ADAMTSL3P82987 1691 aa18.9■□□□□ 0.62
ERGIC3-208ENST00000442139 FER1L4A9Z1Z3 1794 aa18.9■□□□□ 0.62
ERGIC3-208ENST00000442139 FAM135AQ9P2D6 1515 aa18.9■□□□□ 0.62
ERGIC3-208ENST00000442139 NCOA1Q15788 1441 aa18.89■□□□□ 0.61
ERGIC3-208ENST00000442139 ERBINQ96RT1 1412 aa18.88■□□□□ 0.61
ERGIC3-208ENST00000442139 KIF15Q9NS87 1388 aa18.87■□□□□ 0.61
ERGIC3-208ENST00000442139 PPP6R1Q9UPN7 881 aa18.86■□□□□ 0.61
ERGIC3-208ENST00000442139 RNF17Q9BXT8 1623 aaKnown RBP18.85■□□□□ 0.61
ERGIC3-208ENST00000442139 MROH2AA6NES4 1674 aa18.83■□□□□ 0.61
ERGIC3-208ENST00000442139 GCC2Q8IWJ2 1684 aa18.83■□□□□ 0.61
ERGIC3-208ENST00000442139 ZC3H13Q5T200 1668 aaKnown RBP18.82■□□□□ 0.6
ERGIC3-208ENST00000442139 CNTLNQ9NXG0 1405 aa18.82■□□□□ 0.6
ERGIC3-208ENST00000442139 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
ERGIC3-208ENST00000442139 MADDQ8WXG6 1647 aa18.81■□□□□ 0.6
ERGIC3-208ENST00000442139 CHIC2Q9UKJ5 165 aa18.8■□□□□ 0.6
ERGIC3-208ENST00000442139 PTPRKQ15262 1439 aa18.8■□□□□ 0.6
ERGIC3-208ENST00000442139 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
ERGIC3-208ENST00000442139 RRP7BPQ9NSQ0 103 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms