RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 ARHGAP5Q13017 1502 aa17.85■□□□□ 0.45
NELFE-205ENST00000441998 CEP162Q5TB80 1403 aa17.85■□□□□ 0.45
NELFE-205ENST00000441998 ARHGEF40Q8TER5 1519 aa17.85■□□□□ 0.45
NELFE-205ENST00000441998 ZFYVE16Q7Z3T8 1539 aa17.84■□□□□ 0.45
NELFE-205ENST00000441998 AFAP1Q8N556 730 aa17.83■□□□□ 0.44
NELFE-205ENST00000441998 MYO5CQ9NQX4 1742 aa17.83■□□□□ 0.44
NELFE-205ENST00000441998 ATP10AO60312 1499 aa17.82■□□□□ 0.44
NELFE-205ENST00000441998 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
NELFE-205ENST00000441998 PTPRMP28827 1452 aa17.81■□□□□ 0.44
NELFE-205ENST00000441998 ADAMTSL3P82987 1691 aa17.8■□□□□ 0.44
NELFE-205ENST00000441998 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
NELFE-205ENST00000441998 LRRIQ1Q96JM4 1722 aa17.8■□□□□ 0.44
NELFE-205ENST00000441998 MLH3Q9UHC1 1453 aa17.8■□□□□ 0.44
NELFE-205ENST00000441998 GPATCH8Q9UKJ3 1502 aaKnown RBP17.79■□□□□ 0.44
NELFE-205ENST00000441998 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
NELFE-205ENST00000441998 CFDP1Q9UEE9 299 aaPredicted RBP17.78■□□□□ 0.44
NELFE-205ENST00000441998 KIAA1107Q9UPP5 1409 aa17.78■□□□□ 0.44
NELFE-205ENST00000441998 KDM5CP41229 1560 aa17.78■□□□□ 0.44
NELFE-205ENST00000441998 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.43
NELFE-205ENST00000441998 BCORL1Q5H9F3 1711 aa17.76■□□□□ 0.43
NELFE-205ENST00000441998 PLEKHH2Q8IVE3 1493 aa17.75■□□□□ 0.43
NELFE-205ENST00000441998 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
NELFE-205ENST00000441998 PREX2Q70Z35 1606 aa17.75■□□□□ 0.43
NELFE-205ENST00000441998 TRAPPC8Q9Y2L5 1435 aa17.73■□□□□ 0.43
NELFE-205ENST00000441998 ABCC1P33527 1531 aa17.73■□□□□ 0.43
NELFE-205ENST00000441998 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
NELFE-205ENST00000441998 ARHGEF12Q9NZN5 1544 aa17.72■□□□□ 0.43
NELFE-205ENST00000441998 CDC42BPBQ9Y5S2 1711 aa17.72■□□□□ 0.43
NELFE-205ENST00000441998 ZNF777Q9ULD5 760 aaPredicted RBP17.72■□□□□ 0.43
NELFE-205ENST00000441998 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
NELFE-205ENST00000441998 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
NELFE-205ENST00000441998 VPS8Q8N3P4 1428 aa17.7■□□□□ 0.42
NELFE-205ENST00000441998 EHBP1L1Q8N3D4 1523 aa17.69■□□□□ 0.42
NELFE-205ENST00000441998 HECW2Q9P2P5 1572 aa17.69■□□□□ 0.42
NELFE-205ENST00000441998 SPAG9O60271 1321 aaKnown RBP17.69■□□□□ 0.42
NELFE-205ENST00000441998 HNRNPMP52272 730 aaKnown RBP eCLIP17.68■□□□□ 0.42
NELFE-205ENST00000441998 MLECQ14165 292 aa17.68■□□□□ 0.42
NELFE-205ENST00000441998 MADDQ8WXG6 1647 aa17.68■□□□□ 0.42
NELFE-205ENST00000441998 AGLP35573 1532 aa17.67■□□□□ 0.42
NELFE-205ENST00000441998 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
NELFE-205ENST00000441998 MAP3K1Q13233 1512 aa17.65■□□□□ 0.42
NELFE-205ENST00000441998 DIP2CQ9Y2E4 1556 aa17.64■□□□□ 0.41
NELFE-205ENST00000441998 SAMD9LQ8IVG5 1584 aa17.63■□□□□ 0.41
NELFE-205ENST00000441998 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
NELFE-205ENST00000441998 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
NELFE-205ENST00000441998 ESF1Q9H501 851 aaKnown RBP17.61■□□□□ 0.41
NELFE-205ENST00000441998 RTEL1-TNFRSF6BF6WH68 1400 aa17.61■□□□□ 0.41
NELFE-205ENST00000441998 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
NELFE-205ENST00000441998 SYCP2Q9BX26 1530 aa17.61■□□□□ 0.41
NELFE-205ENST00000441998 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
NELFE-205ENST00000441998 NCOA2Q15596 1464 aa17.6■□□□□ 0.41
NELFE-205ENST00000441998 SIGLEC1Q9BZZ2 1709 aa17.59■□□□□ 0.41
NELFE-205ENST00000441998 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
NELFE-205ENST00000441998 ZNF644Q9H582 1327 aaPredicted RBP17.59■□□□□ 0.41
NELFE-205ENST00000441998 TIAM1Q13009 1591 aa17.58■□□□□ 0.41
NELFE-205ENST00000441998 LMTK3Q96Q04 1460 aa17.58■□□□□ 0.41
NELFE-205ENST00000441998 RIMS1Q86UR5 1692 aaKnown RBP17.58■□□□□ 0.4
NELFE-205ENST00000441998 ABCA6Q8N139 1617 aa17.57■□□□□ 0.4
NELFE-205ENST00000441998 KIDINS220Q9ULH0 1771 aa17.56■□□□□ 0.4
NELFE-205ENST00000441998 APLP2Q06481 763 aa17.55■□□□□ 0.4
NELFE-205ENST00000441998 ATP7AQ04656 1500 aa17.55■□□□□ 0.4
NELFE-205ENST00000441998 A2MP01023 1474 aa17.54■□□□□ 0.4
NELFE-205ENST00000441998 SUPT6HQ7KZ85 1726 aaKnown RBP17.53■□□□□ 0.4
NELFE-205ENST00000441998 TSPY4P0CV99 314 aa17.53■□□□□ 0.4
NELFE-205ENST00000441998 TSPY10P0CW01 314 aa17.53■□□□□ 0.4
NELFE-205ENST00000441998 CEBPAP49715 358 aaPredicted RBP17.53■□□□□ 0.4
NELFE-205ENST00000441998 MIA2Q96PC5 1412 aa17.53■□□□□ 0.4
NELFE-205ENST00000441998 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
NELFE-205ENST00000441998 KANK4Q5T7N3 995 aaPredicted RBP17.52■□□□□ 0.4
NELFE-205ENST00000441998 CCDC141Q6ZP82 1450 aa17.51■□□□□ 0.39
NELFE-205ENST00000441998 FER1L4A9Z1Z3 1794 aa17.51■□□□□ 0.39
NELFE-205ENST00000441998 INO80Q9ULG1 1556 aaPredicted RBP17.51■□□□□ 0.39
NELFE-205ENST00000441998 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
NELFE-205ENST00000441998 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
NELFE-205ENST00000441998 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
NELFE-205ENST00000441998 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
NELFE-205ENST00000441998 ZMYM3Q14202 1370 aa17.48■□□□□ 0.39
NELFE-205ENST00000441998 NPATQ14207 1427 aa17.47■□□□□ 0.39
NELFE-205ENST00000441998 MYOM3Q5VTT5 1437 aa17.47■□□□□ 0.39
NELFE-205ENST00000441998 UHRF1BP1Q6BDS2 1440 aa17.47■□□□□ 0.39
NELFE-205ENST00000441998 HSPA2P54652 639 aa17.47■□□□□ 0.39
NELFE-205ENST00000441998 SETD1BQ9UPS6 1966 aaKnown RBP17.46■□□□□ 0.39
NELFE-205ENST00000441998 GGT6Q6P531 493 aa17.46■□□□□ 0.39
NELFE-205ENST00000441998 ARHGEF5Q12774 1597 aa17.45■□□□□ 0.38
NELFE-205ENST00000441998 KIF3BO15066 747 aa17.41■□□□□ 0.38
NELFE-205ENST00000441998 ILDR1Q86SU0 546 aaPredicted RBP17.41■□□□□ 0.38
NELFE-205ENST00000441998 ADGBQ8N7X0 1667 aa17.41■□□□□ 0.38
NELFE-205ENST00000441998 FAM135AQ9P2D6 1515 aa17.41■□□□□ 0.38
NELFE-205ENST00000441998 PREX1Q8TCU6 1659 aa17.39■□□□□ 0.37
NELFE-205ENST00000441998 MROH2AA6NES4 1674 aa17.38■□□□□ 0.37
NELFE-205ENST00000441998 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
NELFE-205ENST00000441998 C3P01024 1663 aa17.36■□□□□ 0.37
NELFE-205ENST00000441998 FBXO41Q8TF61 875 aa17.36■□□□□ 0.37
NELFE-205ENST00000441998 WASHC2CQ9Y4E1 1318 aa17.36■□□□□ 0.37
NELFE-205ENST00000441998 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
NELFE-205ENST00000441998 PTPRTO14522 1441 aa17.34■□□□□ 0.37
NELFE-205ENST00000441998 SHANK2Q9UPX8 1470 aa17.32■□□□□ 0.36
NELFE-205ENST00000441998 FGD6Q6ZV73 1430 aa17.32■□□□□ 0.36
NELFE-205ENST00000441998 TCOF1Q13428 1488 aaKnown RBP17.31■□□□□ 0.36
NELFE-205ENST00000441998 ABCC5O15440 1437 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms