RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 ARID4BQ4LE39 1312 aaPredicted RBP43.88■■■■■ 4.61
MRPL28-204ENST00000441883 POGZQ7Z3K3 1410 aa43.88■■■■■ 4.61
MRPL28-204ENST00000441883 YEATS2Q9ULM3 1422 aa43.87■■■■■ 4.61
MRPL28-204ENST00000441883 BCORL1Q5H9F3 1711 aa43.87■■■■■ 4.61
MRPL28-204ENST00000441883 MAGI2Q86UL8 1455 aa43.86■■■■■ 4.61
MRPL28-204ENST00000441883 ZFYVE16Q7Z3T8 1539 aa43.83■■■■■ 4.61
MRPL28-204ENST00000441883 HECW2Q9P2P5 1572 aa43.81■■■■■ 4.6
MRPL28-204ENST00000441883 ARHGAP5Q13017 1502 aa43.81■■■■■ 4.6
MRPL28-204ENST00000441883 PTPRMP28827 1452 aa43.79■■■■■ 4.6
MRPL28-204ENST00000441883 CDC42BPBQ9Y5S2 1711 aa43.79■■■■■ 4.6
MRPL28-204ENST00000441883 SIGLEC1Q9BZZ2 1709 aa43.75■■■■■ 4.59
MRPL28-204ENST00000441883 MADDQ8WXG6 1647 aa43.73■■■■■ 4.59
MRPL28-204ENST00000441883 PREX2Q70Z35 1606 aa43.7■■■■■ 4.59
MRPL28-204ENST00000441883 AFAP1Q8N556 730 aa43.68■■■■■ 4.58
MRPL28-204ENST00000441883 ZNF518AQ6AHZ1 1483 aa43.66■■■■■ 4.58
MRPL28-204ENST00000441883 ATP10AO60312 1499 aa43.64■■■■■ 4.58
MRPL28-204ENST00000441883 CDC42BPAQ5VT25 1732 aa43.63■■■■■ 4.58
MRPL28-204ENST00000441883 KDM5CP41229 1560 aa43.63■■■■■ 4.57
MRPL28-204ENST00000441883 CEP162Q5TB80 1403 aa43.6■■■■■ 4.57
MRPL28-204ENST00000441883 ARHGEF12Q9NZN5 1544 aa43.58■■■■■ 4.57
MRPL28-204ENST00000441883 RIMS1Q86UR5 1692 aaKnown RBP43.58■■■■■ 4.57
MRPL28-204ENST00000441883 ABCC1P33527 1531 aa43.55■■■■■ 4.56
MRPL28-204ENST00000441883 C9orf84Q5VXU9 1444 aa43.55■■■■■ 4.56
MRPL28-204ENST00000441883 TRAPPC8Q9Y2L5 1435 aa43.54■■■■■ 4.56
MRPL28-204ENST00000441883 GPATCH8Q9UKJ3 1502 aaKnown RBP43.53■■■■■ 4.56
MRPL28-204ENST00000441883 MLECQ14165 292 aa43.52■■■■■ 4.56
MRPL28-204ENST00000441883 ITSN2Q9NZM3 1697 aa43.49■■■■■ 4.55
MRPL28-204ENST00000441883 MLH3Q9UHC1 1453 aa43.48■■■■■ 4.55
MRPL28-204ENST00000441883 LOC105371045A0A1W2PR82 267 aa43.45■■■■■ 4.55
MRPL28-204ENST00000441883 MTUS2Q5JR59 1369 aa43.44■■■■■ 4.54
MRPL28-204ENST00000441883 MYT1LQ9UL68 1186 aa43.44■■■■■ 4.54
MRPL28-204ENST00000441883 DIP2CQ9Y2E4 1556 aa43.44■■■■■ 4.54
MRPL28-204ENST00000441883 ZNF777Q9ULD5 760 aaPredicted RBP43.42■■■■■ 4.54
MRPL28-204ENST00000441883 SAMD9LQ8IVG5 1584 aa43.41■■■■■ 4.54
MRPL28-204ENST00000441883 FER1L4A9Z1Z3 1794 aa43.39■■■■■ 4.54
MRPL28-204ENST00000441883 ABCA6Q8N139 1617 aa43.38■■■■■ 4.54
MRPL28-204ENST00000441883 REREQ9P2R6 1566 aa43.36■■■■■ 4.53
MRPL28-204ENST00000441883 CCNB3Q8WWL7 1395 aa43.35■■■■■ 4.53
MRPL28-204ENST00000441883 CFDP1Q9UEE9 299 aaPredicted RBP43.34■■■■■ 4.53
MRPL28-204ENST00000441883 KIDINS220Q9ULH0 1771 aa43.34■■■■■ 4.53
MRPL28-204ENST00000441883 PLPPR3Q6T4P5 718 aa43.33■■■■■ 4.53
MRPL28-204ENST00000441883 LMTK3Q96Q04 1460 aa43.32■■■■■ 4.53
MRPL28-204ENST00000441883 HNRNPMP52272 730 aaKnown RBP eCLIP43.31■■■■■ 4.52
MRPL28-204ENST00000441883 SYCP2Q9BX26 1530 aa43.3■■■■■ 4.52
MRPL28-204ENST00000441883 EHBP1L1Q8N3D4 1523 aa43.29■■■■■ 4.52
MRPL28-204ENST00000441883 KIAA1107Q9UPP5 1409 aa43.27■■■■■ 4.52
MRPL28-204ENST00000441883 TIAM1Q13009 1591 aa43.24■■■■■ 4.51
MRPL28-204ENST00000441883 AGLP35573 1532 aa43.23■■■■■ 4.51
MRPL28-204ENST00000441883 PLEKHH2Q8IVE3 1493 aa43.23■■■■■ 4.51
MRPL28-204ENST00000441883 SPAG9O60271 1321 aaKnown RBP43.19■■■■■ 4.5
MRPL28-204ENST00000441883 CEBPAP49715 358 aaPredicted RBP43.17■■■■■ 4.5
MRPL28-204ENST00000441883 ZNF644Q9H582 1327 aaPredicted RBP43.17■■■■■ 4.5
MRPL28-204ENST00000441883 VPS8Q8N3P4 1428 aa43.14■■■■■ 4.5
MRPL28-204ENST00000441883 HSPA2P54652 639 aa43.12■■■■■ 4.49
MRPL28-204ENST00000441883 ILDR1Q86SU0 546 aaPredicted RBP43.1■■■■■ 4.49
MRPL28-204ENST00000441883 ATP7AQ04656 1500 aa43.08■■■■■ 4.49
MRPL28-204ENST00000441883 INO80Q9ULG1 1556 aaPredicted RBP43.07■■■■■ 4.49
MRPL28-204ENST00000441883 NCOA2Q15596 1464 aa43.07■■■■■ 4.49
MRPL28-204ENST00000441883 MBD5Q9P267 1494 aa43.06■■■■■ 4.48
MRPL28-204ENST00000441883 SUPT6HQ7KZ85 1726 aaKnown RBP43.05■■■■■ 4.48
MRPL28-204ENST00000441883 PREX1Q8TCU6 1659 aa42.97■■■■■ 4.47
MRPL28-204ENST00000441883 SETD1BQ9UPS6 1966 aaKnown RBP42.97■■■■■ 4.47
MRPL28-204ENST00000441883 C3P01024 1663 aa42.96■■■■■ 4.47
MRPL28-204ENST00000441883 LRRC9Q6ZRR7 1453 aa42.96■■■■■ 4.47
MRPL28-204ENST00000441883 A2MP01023 1474 aa42.95■■■■■ 4.47
MRPL28-204ENST00000441883 ESF1Q9H501 851 aaKnown RBP42.95■■■■■ 4.47
MRPL28-204ENST00000441883 PLXNC1O60486 1568 aa42.95■■■■■ 4.47
MRPL28-204ENST00000441883 CNTLNQ9NXG0 1405 aa42.89■■■■■ 4.46
MRPL28-204ENST00000441883 MAP3K1Q13233 1512 aa42.89■■■■■ 4.46
MRPL28-204ENST00000441883 KANK4Q5T7N3 995 aaPredicted RBP42.89■■■■■ 4.46
MRPL28-204ENST00000441883 RTEL1-TNFRSF6BF6WH68 1400 aa42.88■■■■■ 4.46
MRPL28-204ENST00000441883 CAMSAP2Q08AD1 1489 aa42.87■■■■■ 4.45
MRPL28-204ENST00000441883 ADGBQ8N7X0 1667 aa42.86■■■■■ 4.45
MRPL28-204ENST00000441883 UHRF1BP1Q6BDS2 1440 aa42.82■■■■■ 4.45
MRPL28-204ENST00000441883 CCDC141Q6ZP82 1450 aa42.81■■■■■ 4.44
MRPL28-204ENST00000441883 RSPH4AQ5TD94 716 aa42.8■■■■■ 4.44
MRPL28-204ENST00000441883 MROH2AA6NES4 1674 aa42.79■■■■■ 4.44
MRPL28-204ENST00000441883 ZMYM3Q14202 1370 aa42.78■■■■■ 4.44
MRPL28-204ENST00000441883 GGT6Q6P531 493 aa42.76■■■■■ 4.44
MRPL28-204ENST00000441883 DHX29Q7Z478 1369 aaKnown RBP42.75■■■■■ 4.43
MRPL28-204ENST00000441883 ARHGEF5Q12774 1597 aa42.72■■■■■ 4.43
MRPL28-204ENST00000441883 CLTCQ00610 1675 aaKnown RBP42.72■■■■■ 4.43
MRPL28-204ENST00000441883 STRCQ7RTU9 1775 aa42.68■■■■■ 4.42
MRPL28-204ENST00000441883 PPP6R1Q9UPN7 881 aa42.68■■■■■ 4.42
MRPL28-204ENST00000441883 NPATQ14207 1427 aa42.67■■■■■ 4.42
MRPL28-204ENST00000441883 MYOM3Q5VTT5 1437 aa42.63■■■■■ 4.41
MRPL28-204ENST00000441883 TSPY4P0CV99 314 aa42.62■■■■■ 4.41
MRPL28-204ENST00000441883 TSPY10P0CW01 314 aa42.62■■■■■ 4.41
MRPL28-204ENST00000441883 FBXO41Q8TF61 875 aa42.62■■■■■ 4.41
MRPL28-204ENST00000441883 MIA2Q96PC5 1412 aa42.61■■■■■ 4.41
MRPL28-204ENST00000441883 KIF3BO15066 747 aa42.58■■■■■ 4.41
MRPL28-204ENST00000441883 PTPRKQ15262 1439 aa42.57■■■■■ 4.41
MRPL28-204ENST00000441883 APLP2Q06481 763 aa42.54■■■■■ 4.4
MRPL28-204ENST00000441883 DMRT2Q9Y5R5 561 aa42.54■■■■■ 4.4
MRPL28-204ENST00000441883 MAST1Q9Y2H9 1570 aa42.51■■■■■ 4.4
MRPL28-204ENST00000441883 NCOA1Q15788 1441 aa42.44■■■■■ 4.38
MRPL28-204ENST00000441883 CERKQ8TCT0 537 aa42.43■■■■■ 4.38
MRPL28-204ENST00000441883 PTPRTO14522 1441 aa42.43■■■■■ 4.38
MRPL28-204ENST00000441883 MYO3AQ8NEV4 1616 aa42.41■■■■■ 4.38
MRPL28-204ENST00000441883 CAMSAP1Q5T5Y3 1602 aa42.39■■■■■ 4.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms